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Volumn 45, Issue 7, 2009, Pages 1201-1208

Daily clinical practice of fresh tumour tissue freezing and gene expression profiling; logistics pilot study preceding the MINDACT trial

Author keywords

Breast cancer; Feasibility study; Gene expression signatures; Logistics

Indexed keywords

ADULT; AGED; ARTICLE; BREAST CARCINOMA; CLINICAL PRACTICE; CONTROLLED STUDY; CRYOPRESERVATION; FEMALE; GENE EXPRESSION PROFILING; HUMAN; HUMAN TISSUE; MAJOR CLINICAL STUDY; MICROARRAY ANALYSIS; PRIORITY JOURNAL; RNA ISOLATION; TISSUE PRESERVATION; TUMOR BIOPSY; TUMOR VOLUME;

EID: 64049113346     PISSN: 09598049     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ejca.2009.01.004     Document Type: Article
Times cited : (36)

References (35)
  • 1
    • 0034680102 scopus 로고    scopus 로고
    • Molecular portraits of human breast tumours
    • Perou C.M., Sorlie T., Eisen M.B., et al. Molecular portraits of human breast tumours. Nature 406 (2000) 747-752
    • (2000) Nature , vol.406 , pp. 747-752
    • Perou, C.M.1    Sorlie, T.2    Eisen, M.B.3
  • 2
    • 18244409687 scopus 로고    scopus 로고
    • Gene expression profiling predicts clinical outcome of breast cancer
    • van't Veer L.J., Dai H., van de Vijver M.J., et al. Gene expression profiling predicts clinical outcome of breast cancer. Nature 415 (2002) 530-536
    • (2002) Nature , vol.415 , pp. 530-536
    • van't Veer, L.J.1    Dai, H.2    van de Vijver, M.J.3
  • 3
    • 0037137519 scopus 로고    scopus 로고
    • A gene-expression signature as a predictor of survival in breast cancer
    • van de Vijver M.J., He Y.D., van 't Veer L.J., et al. A gene-expression signature as a predictor of survival in breast cancer. New Engl J Med 347 (2002) 1999-2009
    • (2002) New Engl J Med , vol.347 , pp. 1999-2009
    • van de Vijver, M.J.1    He, Y.D.2    van 't Veer, L.J.3
  • 4
    • 0042125511 scopus 로고    scopus 로고
    • Gene expression profiling for the prediction of therapeutic response to docetaxel in patients with breast cancer
    • Chang J.C., Wooten E.C., Tsimelzon A., et al. Gene expression profiling for the prediction of therapeutic response to docetaxel in patients with breast cancer. Lancet 362 (2003) 362-369
    • (2003) Lancet , vol.362 , pp. 362-369
    • Chang, J.C.1    Wooten, E.C.2    Tsimelzon, A.3
  • 5
    • 19944422061 scopus 로고    scopus 로고
    • A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer
    • Paik S., Shak S., Tang G., et al. A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer. New Engl J Med 351 (2004) 2817-2826
    • (2004) New Engl J Med , vol.351 , pp. 2817-2826
    • Paik, S.1    Shak, S.2    Tang, G.3
  • 6
    • 20144386127 scopus 로고    scopus 로고
    • Robustness, scalability, and integration of a wound-response gene expression signature in predicting breast cancer survival
    • Chang H.Y., Nuyten D.S.A., Sneddon J.B., et al. Robustness, scalability, and integration of a wound-response gene expression signature in predicting breast cancer survival. Proc Natl Acad Sci USA 102 (2005) 3738-3743
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 3738-3743
    • Chang, H.Y.1    Nuyten, D.S.A.2    Sneddon, J.B.3
  • 7
    • 28044472321 scopus 로고    scopus 로고
    • Gene expression profiles in paraffin-embedded core biopsy tissue predict response to chemotherapy in women with locally advanced breast cancer
    • Gianni L., Zambetti M., Clark K., et al. Gene expression profiles in paraffin-embedded core biopsy tissue predict response to chemotherapy in women with locally advanced breast cancer. J Clin Oncol 23 (2005) 7265-7277
    • (2005) J Clin Oncol , vol.23 , pp. 7265-7277
    • Gianni, L.1    Zambetti, M.2    Clark, K.3
  • 8
    • 20644447122 scopus 로고    scopus 로고
    • Changes in gene expression associated with response to neoadjuvant chemotherapy in breast cancer
    • Hannemann J., Oosterkamp H.M., Bosch C.A., et al. Changes in gene expression associated with response to neoadjuvant chemotherapy in breast cancer. J Clin Oncol 23 (2005) 3331-3342
    • (2005) J Clin Oncol , vol.23 , pp. 3331-3342
    • Hannemann, J.1    Oosterkamp, H.M.2    Bosch, C.A.3
  • 9
    • 14544268597 scopus 로고    scopus 로고
    • Prediction of docetaxel response in human breast cancer by gene expression profiling
    • Iwao-Koizumi K., Matoba R., Ueno N., et al. Prediction of docetaxel response in human breast cancer by gene expression profiling. J Clin Oncol 23 (2005) 422-431
    • (2005) J Clin Oncol , vol.23 , pp. 422-431
    • Iwao-Koizumi, K.1    Matoba, R.2    Ueno, N.3
  • 10
    • 23844549918 scopus 로고    scopus 로고
    • Breast cancer molecular subtypes respond differently to preoperative chemotherapy
    • Rouzier R., Perou C.M., Symmans W.F., et al. Breast cancer molecular subtypes respond differently to preoperative chemotherapy. Clin Cancer Res 11 (2005) 5678-5685
    • (2005) Clin Cancer Res , vol.11 , pp. 5678-5685
    • Rouzier, R.1    Perou, C.M.2    Symmans, W.F.3
  • 11
    • 13844310310 scopus 로고    scopus 로고
    • Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer
    • Wang Y., Klijn J.G., Zhang Y., et al. Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer. Lancet 365 (2005) 671-679
    • (2005) Lancet , vol.365 , pp. 671-679
    • Wang, Y.1    Klijn, J.G.2    Zhang, Y.3
  • 12
    • 33749030177 scopus 로고    scopus 로고
    • Pharmacogenomic predictor of sensitivity to preoperative chemotherapy with paclitaxel and fluorouracil, doxorubicin, and cyclophosphamide in breast cancer
    • Hess K.R., Anderson K., Symmans W.F., et al. Pharmacogenomic predictor of sensitivity to preoperative chemotherapy with paclitaxel and fluorouracil, doxorubicin, and cyclophosphamide in breast cancer. J Clin Oncol 24 (2006) 4236-4244
    • (2006) J Clin Oncol , vol.24 , pp. 4236-4244
    • Hess, K.R.1    Anderson, K.2    Symmans, W.F.3
  • 13
    • 33750727368 scopus 로고    scopus 로고
    • Genomic signatures to guide the use of chemotherapeutics
    • Potti A., Dressman H.K., Bild A., et al. Genomic signatures to guide the use of chemotherapeutics. Nat Med 12 (2006) 1294-1300
    • (2006) Nat Med , vol.12 , pp. 1294-1300
    • Potti, A.1    Dressman, H.K.2    Bild, A.3
  • 14
    • 33144462268 scopus 로고    scopus 로고
    • Gene expression profiling in breast cancer: understanding the molecular basis of histologic grade to improve prognosis
    • Sotiriou C., Wirapati P., Loi S., et al. Gene expression profiling in breast cancer: understanding the molecular basis of histologic grade to improve prognosis. J Natl Cancer Inst 98 (2006) 262-272
    • (2006) J Natl Cancer Inst , vol.98 , pp. 262-272
    • Sotiriou, C.1    Wirapati, P.2    Loi, S.3
  • 15
    • 33646339959 scopus 로고    scopus 로고
    • Gene expression signature predicting pathologic complete response with gemcitabine, epirubicin, and docetaxel in primary breast cancer
    • Thuerigen O., Schneeweiss A., Toedt G., et al. Gene expression signature predicting pathologic complete response with gemcitabine, epirubicin, and docetaxel in primary breast cancer. J Clin Oncol 24 (2006) 1839-1845
    • (2006) J Clin Oncol , vol.24 , pp. 1839-1845
    • Thuerigen, O.1    Schneeweiss, A.2    Toedt, G.3
  • 16
    • 36549068221 scopus 로고    scopus 로고
    • Validation of gene signatures that predict the response of breast cancer to neoadjuvant chemotherapy: a substudy of the EORTC 10994/BIG 00-01 clinical trial
    • Bonnefoi H., Potti A., Delorenzi M., et al. Validation of gene signatures that predict the response of breast cancer to neoadjuvant chemotherapy: a substudy of the EORTC 10994/BIG 00-01 clinical trial. Lancet Oncol 8 (2007) 1071-1078
    • (2007) Lancet Oncol , vol.8 , pp. 1071-1078
    • Bonnefoi, H.1    Potti, A.2    Delorenzi, M.3
  • 17
    • 33748693297 scopus 로고    scopus 로고
    • Validation and clinical utility of a 70-gene prognostic signature for women with node-negative breast cancer
    • Buyse M., Loi S., van't Veer L., et al. Validation and clinical utility of a 70-gene prognostic signature for women with node-negative breast cancer. J Natl Cancer Inst 98 (2006) 1183-1192
    • (2006) J Natl Cancer Inst , vol.98 , pp. 1183-1192
    • Buyse, M.1    Loi, S.2    van't Veer, L.3
  • 19
    • 67649183386 scopus 로고    scopus 로고
    • The 70-gene prognosis-signature predicts disease outcome in breast cancer patients with 1-3 positive lymph nodes in an independent validation study
    • in press
    • Mook S, Schmidt MK, Viale G, et al. The 70-gene prognosis-signature predicts disease outcome in breast cancer patients with 1-3 positive lymph nodes in an independent validation study. Breast Cancer Res Treat [in press].
    • Breast Cancer Res Treat
    • Mook, S.1    Schmidt, M.K.2    Viale, G.3
  • 20
    • 49649114805 scopus 로고    scopus 로고
    • Analysis of the MammaPrint breast cancer assay in a predominantly postmenopausal cohort
    • Wittner B.S., Sgroi D.C., Ryan P.D., et al. Analysis of the MammaPrint breast cancer assay in a predominantly postmenopausal cohort. Clin Cancer Res 14 (2008) 2988-2993
    • (2008) Clin Cancer Res , vol.14 , pp. 2988-2993
    • Wittner, B.S.1    Sgroi, D.C.2    Ryan, P.D.3
  • 21
    • 0033571272 scopus 로고    scopus 로고
    • Analysis of chemical modification of RNA from formalin-fixed samples and optimization of molecular biology applications for such samples
    • Masuda N., Ohnishi T., Kawamoto S., Monden M., and Okubo K. Analysis of chemical modification of RNA from formalin-fixed samples and optimization of molecular biology applications for such samples. Nucl Acids Res 27 (1999) 4436-4443
    • (1999) Nucl Acids Res , vol.27 , pp. 4436-4443
    • Masuda, N.1    Ohnishi, T.2    Kawamoto, S.3    Monden, M.4    Okubo, K.5
  • 22
    • 1542469713 scopus 로고    scopus 로고
    • Measurement of gene expression in archival paraffin-embedded tissues: development and performance of a 92-gene reverse transcriptase-polymerase chain reaction assay
    • Cronin M., Pho M., Dutta D., et al. Measurement of gene expression in archival paraffin-embedded tissues: development and performance of a 92-gene reverse transcriptase-polymerase chain reaction assay. Am J Pathol 164 (2004) 35-42
    • (2004) Am J Pathol , vol.164 , pp. 35-42
    • Cronin, M.1    Pho, M.2    Dutta, D.3
  • 23
    • 0028853478 scopus 로고
    • An improved approach to prepare human brains for research
    • Vonsattel J.P., Aizawa H., Ge P., et al. An improved approach to prepare human brains for research. J Neuropathol Exp Neurol 54 (1995) 42-56
    • (1995) J Neuropathol Exp Neurol , vol.54 , pp. 42-56
    • Vonsattel, J.P.1    Aizawa, H.2    Ge, P.3
  • 24
    • 36549030796 scopus 로고    scopus 로고
    • Use of 70-gene signature to predict prognosis of patients with node-negative breast cancer: a prospective community-based feasibility study (RASTER)
    • Bueno-de-Mesquita J.M., van Harten W.H., Retel V.P., et al. Use of 70-gene signature to predict prognosis of patients with node-negative breast cancer: a prospective community-based feasibility study (RASTER). Lancet Oncol 8 (2007) 1079-1087
    • (2007) Lancet Oncol , vol.8 , pp. 1079-1087
    • Bueno-de-Mesquita, J.M.1    van Harten, W.H.2    Retel, V.P.3
  • 25
    • 33750601244 scopus 로고    scopus 로고
    • Gene signature evaluation as a prognostic tool: challenges in the design of the MINDACT trial
    • Bogaerts J., Cardoso F., Buyse M., et al. Gene signature evaluation as a prognostic tool: challenges in the design of the MINDACT trial. Nat Clin Pract Oncol 3 (2006) 540-551
    • (2006) Nat Clin Pract Oncol , vol.3 , pp. 540-551
    • Bogaerts, J.1    Cardoso, F.2    Buyse, M.3
  • 28
    • 33751193656 scopus 로고    scopus 로고
    • Converting a breast cancer microarray signature into a high-throughput diagnostic test
    • Glas A.M., Floore A., Delahaye L.J., et al. Converting a breast cancer microarray signature into a high-throughput diagnostic test. BMC Genom 7 (2006) 278-287
    • (2006) BMC Genom , vol.7 , pp. 278-287
    • Glas, A.M.1    Floore, A.2    Delahaye, L.J.3
  • 29
    • 0034535382 scopus 로고    scopus 로고
    • Validation of tissue microarray technology in breast carcinoma
    • Camp R.L., Charette L.A., and Rimm D.L. Validation of tissue microarray technology in breast carcinoma. Lab Invest 80 (2000) 1943-1949
    • (2000) Lab Invest , vol.80 , pp. 1943-1949
    • Camp, R.L.1    Charette, L.A.2    Rimm, D.L.3
  • 30
    • 18244389201 scopus 로고    scopus 로고
    • Standardizing global gene expression analysis between laboratories and across platforms
    • Bammler T., Beyer R.P., Bhattacharya S., et al. Standardizing global gene expression analysis between laboratories and across platforms. Nat Meth 2 (2005) 351-356
    • (2005) Nat Meth , vol.2 , pp. 351-356
    • Bammler, T.1    Beyer, R.P.2    Bhattacharya, S.3
  • 31
    • 19944429996 scopus 로고    scopus 로고
    • Interlaboratory comparability study of cancer gene expression analysis using oligonucleotide microarrays
    • Dobbin K.K., Beer D.G., Meyerson M., et al. Interlaboratory comparability study of cancer gene expression analysis using oligonucleotide microarrays. Clin Cancer Res 11 (2005) 565-572
    • (2005) Clin Cancer Res , vol.11 , pp. 565-572
    • Dobbin, K.K.1    Beer, D.G.2    Meyerson, M.3
  • 32
    • 18244384210 scopus 로고    scopus 로고
    • Multiple-laboratory comparison of microarray platforms
    • Irizarry R.A., Warren D., Spencer F., et al. Multiple-laboratory comparison of microarray platforms. Nat Meth 2 (2005) 345-350
    • (2005) Nat Meth , vol.2 , pp. 345-350
    • Irizarry, R.A.1    Warren, D.2    Spencer, F.3
  • 33
    • 0035108505 scopus 로고    scopus 로고
    • Preservation of RNA for functional genomic studies: a multidisciplinary tumor bank protocol
    • Florell S.R., Coffin C.M., Holden J.A., et al. Preservation of RNA for functional genomic studies: a multidisciplinary tumor bank protocol. Mod Pathol 14 (2001) 116-128
    • (2001) Mod Pathol , vol.14 , pp. 116-128
    • Florell, S.R.1    Coffin, C.M.2    Holden, J.A.3
  • 34
    • 9144220374 scopus 로고    scopus 로고
    • Comparison of frozen and RNALater solid tissue storage methods for use in RNA expression microarrays
    • Mutter G.L., Zahrieh D., Liu C., et al. Comparison of frozen and RNALater solid tissue storage methods for use in RNA expression microarrays. BMC Genom 5 (2004) 88-94
    • (2004) BMC Genom , vol.5 , pp. 88-94
    • Mutter, G.L.1    Zahrieh, D.2    Liu, C.3
  • 35
    • 57149104138 scopus 로고    scopus 로고
    • Recommendations for collection and handling of specimens from group breast cancer clinical trials
    • Leyland-Jones B.R., Ambrosone C.B., Bartlett J., et al. Recommendations for collection and handling of specimens from group breast cancer clinical trials. J Clin Oncol 26 (2008) 5638-5644
    • (2008) J Clin Oncol , vol.26 , pp. 5638-5644
    • Leyland-Jones, B.R.1    Ambrosone, C.B.2    Bartlett, J.3


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