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Volumn 23, Issue 29, 2005, Pages 7265-7277

Gene expression profiles in paraffin-embedded core biopsy tissue predict response to chemotherapy in women with locally advanced breast cancer

Author keywords

[No Author keywords available]

Indexed keywords

CYCLOPHOSPHAMIDE; DOXORUBICIN; FLUOROURACIL; METHOTREXATE; PACLITAXEL; PARAFFIN; ANTINEOPLASTIC AGENT;

EID: 28044472321     PISSN: 0732183X     EISSN: None     Source Type: Journal    
DOI: 10.1200/JCO.2005.02.0818     Document Type: Article
Times cited : (505)

References (44)
  • 1
    • 0031926839 scopus 로고    scopus 로고
    • Effect of preoperative chemotherapy on the outcome of women with operable breast cancer
    • Fisher B, Bryant J, Wolmark N, et al: Effect of preoperative chemotherapy on the outcome of women with operable breast cancer. J Clin Oncol 16:2672-2685, 1998
    • (1998) J Clin Oncol , vol.16 , pp. 2672-2685
    • Fisher, B.1    Bryant, J.2    Wolmark, N.3
  • 2
    • 0031972858 scopus 로고    scopus 로고
    • Primary chemotherapy in operable breast cancer: Eight-year experience at the Milan Cancer Institute
    • Bonadonna G, Valagussa P, Brambilla C, et al: Primary chemotherapy in operable breast cancer: Eight-year experience at the Milan Cancer Institute. J Clin Oncol 16:93-100, 1998
    • (1998) J Clin Oncol , vol.16 , pp. 93-100
    • Bonadonna, G.1    Valagussa, P.2    Brambilla, C.3
  • 3
    • 0037087562 scopus 로고    scopus 로고
    • Neoadjuvant chemotherapy in breast cancer: Significantly enhanced response with docetaxel
    • Smith IC, Heys SD, Hutcheon AW, et al: Neoadjuvant chemotherapy in breast cancer: Significantly enhanced response with docetaxel. J Clin Oncol 20:1456-1466, 2002
    • (2002) J Clin Oncol , vol.20 , pp. 1456-1466
    • Smith, I.C.1    Heys, S.D.2    Hutcheon, A.W.3
  • 4
    • 0038013982 scopus 로고    scopus 로고
    • International expert panel on the use of primary (preoperative) systemic treatment of operable breast cancer: Review and recommendations
    • Kaufmann M, von Minckwitz G, Smith R, et al: International expert panel on the use of primary (preoperative) systemic treatment of operable breast cancer: Review and recommendations. J Clin Oncol 21:2600-2608, 2003
    • (2003) J Clin Oncol , vol.21 , pp. 2600-2608
    • Kaufmann, M.1    von Minckwitz, G.2    Smith, R.3
  • 5
    • 14044277600 scopus 로고    scopus 로고
    • Gene expression profiling of primary breast cancer
    • Rouzier R, Wagner P, Morandi P, et al: Gene expression profiling of primary breast cancer. Curr Oncol Rep 7:38-44, 2005
    • (2005) Curr Oncol Rep , vol.7 , pp. 38-44
    • Rouzier, R.1    Wagner, P.2    Morandi, P.3
  • 6
    • 0035845511 scopus 로고    scopus 로고
    • Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications
    • Sorlie T, Perou CM, Tibshirani R, et al: Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications. Proc Natl Acad Sci USA 98:10869-10874, 2001
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 10869-10874
    • Sorlie, T.1    Perou, C.M.2    Tibshirani, R.3
  • 7
    • 0037137519 scopus 로고    scopus 로고
    • A gene-expression signature as a predictor of survival in breast cancer
    • van de Vijver MJ, He YD, van't Veer LJ, et al: A gene-expression signature as a predictor of survival in breast cancer. N Engl J Med 347:1999-2009, 2002
    • (2002) N Engl J Med , vol.347 , pp. 1999-2009
    • van de Vijver, M.J.1    He, Y.D.2    van't Veer, L.J.3
  • 8
    • 0032887665 scopus 로고    scopus 로고
    • Biologic markers as predictors of clinical outcome from systemic therapy for primary operable breast cancer
    • Chang J, Powles TJ, Allred DC, et al: Biologic markers as predictors of clinical outcome from systemic therapy for primary operable breast cancer. J Clin Oncol 17:3058-3063, 1999
    • (1999) J Clin Oncol , vol.17 , pp. 3058-3063
    • Chang, J.1    Powles, T.J.2    Allred, D.C.3
  • 9
    • 13844311931 scopus 로고    scopus 로고
    • Gene expression profiles derived from fine needle aspiration correlate with response to systemic chemotherapy in breast cancer
    • Sotiriou C, Powles TJ, Dowsett M, et al: Gene expression profiles derived from fine needle aspiration correlate with response to systemic chemotherapy in breast cancer. Breast Cancer Res 4:R3, 2002
    • (2002) Breast Cancer Res , vol.4
    • Sotiriou, C.1    Powles, T.J.2    Dowsett, M.3
  • 10
    • 0036303543 scopus 로고    scopus 로고
    • The feasibility of using fine needle aspiration from primary breast cancers for cDNA microarray analyses
    • Assersohn L, Gangi L, Zhao Y, et al: The feasibility of using fine needle aspiration from primary breast cancers for cDNA microarray analyses. Clin Cancer Res 8:794-801, 2002
    • (2002) Clin Cancer Res , vol.8 , pp. 794-801
    • Assersohn, L.1    Gangi, L.2    Zhao, Y.3
  • 11
    • 2942729848 scopus 로고    scopus 로고
    • Gene expression profiles predict complete pathologic response to neoadjuvant paclitaxel and fluorouracil, doxorubicin, and cyclophosphamide chemotherapy in breast cancer
    • Ayers M, Symmans WF, Stec J, et al: Gene expression profiles predict complete pathologic response to neoadjuvant paclitaxel and fluorouracil, doxorubicin, and cyclophosphamide chemotherapy in breast cancer. J Clin Oncol 22:2284-2293, 2004
    • (2004) J Clin Oncol , vol.22 , pp. 2284-2293
    • Ayers, M.1    Symmans, W.F.2    Stec, J.3
  • 12
    • 0036096713 scopus 로고    scopus 로고
    • Development and validation of a method for using breast core needle biopsies for gene expression microarray analyses
    • Ellis M, Davis N, Coop A, et al: Development and validation of a method for using breast core needle biopsies for gene expression microarray analyses. Clin Cancer Res 8:1155-1166, 2002
    • (2002) Clin Cancer Res , vol.8 , pp. 1155-1166
    • Ellis, M.1    Davis, N.2    Coop, A.3
  • 13
    • 0037082153 scopus 로고    scopus 로고
    • An evaluation of tyramide signal amplification and archived fixed and frozen tissue in microarray gene expression analysis
    • Karsten SL, Van Deerlin VM, Sabatti C, et al: An evaluation of tyramide signal amplification and archived fixed and frozen tissue in microarray gene expression analysis. Nucleic Acids Res 30:E4, 2002
    • (2002) Nucleic Acids Res , vol.30
    • Karsten, S.L.1    Van Deerlin, V.M.2    Sabatti, C.3
  • 14
    • 0036534202 scopus 로고    scopus 로고
    • DNA microarrays in clinical oncology
    • Ramaswamy S, Golub TR: DNA microarrays in clinical oncology. J Clin Oncol 20:1932-1941, 2002
    • (2002) J Clin Oncol , vol.20 , pp. 1932-1941
    • Ramaswamy, S.1    Golub, T.R.2
  • 15
    • 1542469713 scopus 로고    scopus 로고
    • Measurement of gene expression in archival paraffin-embedded tissues: Development and performance of a 92-gene reverse transcriptase-polymerase chain reaction assay
    • Cronin M, Pho M, Dutta D, et al: Measurement of gene expression in archival paraffin-embedded tissues: Development and performance of a 92-gene reverse transcriptase-polymerase chain reaction assay. Am J Pathol 164:35-42, 2004
    • (2004) Am J Pathol , vol.164 , pp. 35-42
    • Cronin, M.1    Pho, M.2    Dutta, D.3
  • 16
    • 0035134463 scopus 로고    scopus 로고
    • Quantitative gene expression analysis in micro-dissected archival formalin-fixed and paraffin-embedded tumor tissue
    • Specht K, Richter T, Muller U, et al: Quantitative gene expression analysis in micro-dissected archival formalin-fixed and paraffin-embedded tumor tissue. Am J Pathol 158: 419-429, 2001
    • (2001) Am J Pathol , vol.158 , pp. 419-429
    • Specht, K.1    Richter, T.2    Muller, U.3
  • 17
    • 19944422061 scopus 로고    scopus 로고
    • A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer
    • Paik S, Shak S, Tang G, et al: A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer. N Engl J Med 351:2817-2826, 2004
    • (2004) N Engl J Med , vol.351 , pp. 2817-2826
    • Paik, S.1    Shak, S.2    Tang, G.3
  • 18
    • 0036856374 scopus 로고    scopus 로고
    • Methods for assessing reproducibility of clustering patterns observed in analyses of microarray data
    • McShane LM, Radmacher MD, Simon R: Methods for assessing reproducibility of clustering patterns observed in analyses of microarray data. Bioinformatics 18:1462-1469, 2002
    • (2002) Bioinformatics , vol.18 , pp. 1462-1469
    • McShane, L.M.1    Radmacher, M.D.2    Simon, R.3
  • 19
    • 0034680102 scopus 로고    scopus 로고
    • Molecular portraits of human breast tumours
    • Perou CM, Sorlie T, Eisen MB, et al: Molecular portraits of human breast tumours. Nature 406:747-752, 2000
    • (2000) Nature , vol.406 , pp. 747-752
    • Perou, C.M.1    Sorlie, T.2    Eisen, M.B.3
  • 20
    • 18244409687 scopus 로고    scopus 로고
    • Gene expression profiling predicts clinical outcome of breast cancer
    • van't Veer LJ, Dai H, van de Vijver MJ, et al: Gene expression profiling predicts clinical outcome of breast cancer. Nature 2002;415(6871):530-6.
    • (2002) Nature , vol.415 , Issue.6871 , pp. 530-536
    • van't Veer, L.J.1    Dai, H.2    van de Vijver, M.J.3
  • 21
    • 0042125511 scopus 로고    scopus 로고
    • Gene expression profiling for the prediction of therapeutic response to docetaxel in patients with breast cancer
    • Chang JC, Wooten EC, Tsimelzon A, et al: Gene expression profiling for the prediction of therapeutic response to docetaxel in patients with breast cancer. Lancet 362:362-369, 2003
    • (2003) Lancet , vol.362 , pp. 362-369
    • Chang, J.C.1    Wooten, E.C.2    Tsimelzon, A.3
  • 22
    • 84871473752 scopus 로고    scopus 로고
    • Identification of genes associated with non-MDR1 taxane resistance in human ovarian carcinoma cell lines by microarray analysis
    • abstr 5760
    • Duran GE, Wang YC, Francisco B, et al: Identification of genes associated with non-MDR1 taxane resistance in human ovarian carcinoma cell lines by microarray analysis. Am Assoc Cancer Res, 2003 (abstr 5760)
    • (2003) Am Assoc Cancer Res
    • Duran, G.E.1    Wang, Y.C.2    Francisco, B.3
  • 23
    • 0038713475 scopus 로고    scopus 로고
    • Molecular description of evolving paclitaxel resistance in the SKOV-3 human ovarian carcinoma cell line
    • Lamendola DE, Duan Z, Yusuf RZ, et al: Molecular description of evolving paclitaxel resistance in the SKOV-3 human ovarian carcinoma cell line. Cancer Res 63:2200-2205, 2003
    • (2003) Cancer Res , vol.63 , pp. 2200-2205
    • Lamendola, D.E.1    Duan, Z.2    Yusuf, R.Z.3
  • 24
    • 0032711015 scopus 로고    scopus 로고
    • Discovery of differentially expressed genes associated with paclitaxel resistance using cDNA array technology: Analysis of interleukin (IL) 6, IL-8, and monocyte chemotactic protein 1 in the paclitaxel-resistant phenotype
    • Duan Z, Feller AJ, Pensen RT, et al: Discovery of differentially expressed genes associated with paclitaxel resistance using cDNA array technology: analysis of interleukin (IL) 6, IL-8, and monocyte chemotactic protein 1 in the paclitaxel-resistant phenotype. Clin Cancer Res 5:3445-3453, 1999
    • (1999) Clin Cancer Res , vol.5 , pp. 3445-3453
    • Duan, Z.1    Feller, A.J.2    Pensen, R.T.3
  • 25
    • 0026072872 scopus 로고
    • Pathological prognostic factors in breast cancer, I: The value of histological grade in breast cancer: experience from a large study with long-term follow-up
    • Elston CW, Ellis IO: Pathological prognostic factors in breast cancer, I: The value of histological grade in breast cancer: experience from a large study with long-term follow-up. Histopathology 19:403-410, 1991
    • (1991) Histopathology , vol.19 , pp. 403-410
    • Elston, C.W.1    Ellis, I.O.2
  • 26
    • 0037672713 scopus 로고    scopus 로고
    • Total RNA yield and microarray gene expression profiles from fine-needle aspiration biopsy and core-needle biopsy samples of breast carcinoma
    • Symmans WF, Ayers M, Clark EA, et al: Total RNA yield and microarray gene expression profiles from fine-needle aspiration biopsy and core-needle biopsy samples of breast carcinoma. Cancer 97:2960-2971, 2003
    • (2003) Cancer , vol.97 , pp. 2960-2971
    • Symmans, W.F.1    Ayers, M.2    Clark, E.A.3
  • 31
    • 85050713567 scopus 로고
    • A new asymmetric measure of association for ordinal variables
    • Somers RH: A new asymmetric measure of association for ordinal variables. Am Sociol Rev 27:799-811, 1962
    • (1962) Am Sociol Rev , vol.27 , pp. 799-811
    • Somers, R.H.1
  • 32
    • 77956887506 scopus 로고
    • A note on a general definition of the coefficient of determination
    • Nagelkerke NJD: A note on a general definition of the coefficient of determination. Biometrika 78:691-692, 1991
    • (1991) Biometrika , vol.78 , pp. 691-692
    • Nagelkerke, N.J.D.1
  • 33
    • 84950461478 scopus 로고
    • Estimating the error rate of a prediction rule: Improvement on cross-validation
    • Efron B: Estimating the error rate of a prediction rule: Improvement on cross-validation. J Am Stat Assoc 78:316-331, 1983
    • (1983) J Am Stat Assoc , vol.78 , pp. 316-331
    • Efron, B.1
  • 34
    • 0036211063 scopus 로고    scopus 로고
    • Analysis of matched mRNA measurements from two different microarray technologies
    • Kuo WP, Jenssen TK, Butte AJ, et al: Analysis of matched mRNA measurements from two different microarray technologies. Bioinformatics 18:405-412, 2002
    • (2002) Bioinformatics , vol.18 , pp. 405-412
    • Kuo, W.P.1    Jenssen, T.K.2    Butte, A.J.3
  • 35
    • 0037095769 scopus 로고    scopus 로고
    • Accuracy and calibration of commercial oligonucleotide and custom cDNA microarrays
    • Yuen T, Wurmbach E, Pfeffer RL, et al: Accuracy and calibration of commercial oligonucleotide and custom cDNA microarrays. Nucleic Acids Res 30:e48, 2002
    • (2002) Nucleic Acids Res , vol.30
    • Yuen, T.1    Wurmbach, E.2    Pfeffer, R.L.3
  • 36
    • 13444304216 scopus 로고    scopus 로고
    • Microarrays and molecular research: Noise discovery?
    • Ioannidis JP: Microarrays and molecular research: Noise discovery? Lancet 365:454-455, 2005
    • (2005) Lancet , vol.365 , pp. 454-455
    • Ioannidis, J.P.1
  • 37
    • 0018191112 scopus 로고
    • The relation between estrogen receptors and response rate to cytotoxic chemotherapy in metastatic breast cancer
    • Lippman ME, Allegra JC, Thompson EB, et al: The relation between estrogen receptors and response rate to cytotoxic chemotherapy in metastatic breast cancer. N Engl J Med 298:1223-1228, 1978
    • (1978) N Engl J Med , vol.298 , pp. 1223-1228
    • Lippman, M.E.1    Allegra, J.C.2    Thompson, E.B.3
  • 38
    • 0033050164 scopus 로고    scopus 로고
    • Clinical course of breast cancer patients with complete pathologic primary tumor and axillary lymph node response to doxorubicin-based neoadjuvant chemotherapy
    • Kuerer HM, Newman LA, Smith TL, et al: Clinical course of breast cancer patients with complete pathologic primary tumor and axillary lymph node response to doxorubicin-based neoadjuvant chemotherapy. J Clin Oncol 17:460-469, 1999
    • (1999) J Clin Oncol , vol.17 , pp. 460-469
    • Kuerer, H.M.1    Newman, L.A.2    Smith, T.L.3
  • 39
    • 0033798028 scopus 로고    scopus 로고
    • Response to primary chemotherapy in breast cancer patients with tumors not expressing estrogen and progesterone receptors
    • Colleoni M, Minchella I, Mazzarol G, et al: Response to primary chemotherapy in breast cancer patients with tumors not expressing estrogen and progesterone receptors. Ann Oncol 11:1057-1059, 2000
    • (2000) Ann Oncol , vol.11 , pp. 1057-1059
    • Colleoni, M.1    Minchella, I.2    Mazzarol, G.3
  • 40
    • 84871474444 scopus 로고    scopus 로고
    • Gianni L, Baselga J, Eiermann W, et al: First report of the European Cooperative Trial in operable breast cancer (ECTO): Effects of primary systemic therapy (PST) on local-regional disease. Proc Am Soc Clin Oncol, 2002 (abstr 132)
    • Gianni L, Baselga J, Eiermann W, et al: First report of the European Cooperative Trial in operable breast cancer (ECTO): Effects of primary systemic therapy (PST) on local-regional disease. Proc Am Soc Clin Oncol, 2002 (abstr 132)
  • 41
    • 1842477895 scopus 로고    scopus 로고
    • Expression of multidrug resistance-1 protein inversely correlates with paclitaxel response and survival in ovarian cancer patients: A study in serial samples
    • Penson RT, Oliva E, Skates SJ, et al: Expression of multidrug resistance-1 protein inversely correlates with paclitaxel response and survival in ovarian cancer patients: A study in serial samples. Gynecol Oncol 93:98-106, 2004
    • (2004) Gynecol Oncol , vol.93 , pp. 98-106
    • Penson, R.T.1    Oliva, E.2    Skates, S.J.3
  • 42
    • 0037380839 scopus 로고    scopus 로고
    • Small interfering RNA-induced suppression of MDR1 (P-glycoprotein) restores sensitivity to multidrug-resistant cancer cells
    • Wu H, Hait WN, Yang JM: Small interfering RNA-induced suppression of MDR1 (P-glycoprotein) restores sensitivity to multidrug-resistant cancer cells. Cancer Res 63: 1515-1519, 2003
    • (2003) Cancer Res , vol.63 , pp. 1515-1519
    • Wu, H.1    Hait, W.N.2    Yang, J.M.3
  • 43
    • 0037314795 scopus 로고    scopus 로고
    • RNA expression of breast cancer resistance protein, lung resistance-related protein, multidrug resistance-associated proteins 1 and 2, and multidrug resistance gene 1 in breast cancer: Correlation with chemotherapeutic response
    • Burger H, Foekens JA, Look MP, et al: RNA expression of breast cancer resistance protein, lung resistance-related protein, multidrug resistance-associated proteins 1 and 2, and multidrug resistance gene 1 in breast cancer: Correlation with chemotherapeutic response. Clin Cancer Res 9:827-836, 2003
    • (2003) Clin Cancer Res , vol.9 , pp. 827-836
    • Burger, H.1    Foekens, J.A.2    Look, M.P.3
  • 44
    • 6444228081 scopus 로고    scopus 로고
    • Multidrug resistance associated genes MRP1, MRP2 and MRP3 in primary and anthracycline exposed breast cancer
    • Faneyte IF, Kristel PM, van de Vijver MJ: Multidrug resistance associated genes MRP1, MRP2 and MRP3 in primary and anthracycline exposed breast cancer. Anticancer Res 24:2931-2939, 2004
    • (2004) Anticancer Res , vol.24 , pp. 2931-2939
    • Faneyte, I.F.1    Kristel, P.M.2    van de Vijver, M.J.3


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