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Volumn 157, Issue 2, 2009, Pages 188-194

Rapid identification of viruses causing sugarcane mosaic by direct sequencing of RT-PCR products from crude extracts: A method for large scale virus surveys

Author keywords

Diagnosis; Rapid virus release; RT PCR; Sorghum mosaic virus; Sugarcane mosaic virus

Indexed keywords

OLIGONUCLEOTIDE; VIRUS RNA;

EID: 63649131744     PISSN: 01660934     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jviromet.2008.12.018     Document Type: Article
Times cited : (7)

References (19)
  • 1
    • 15244344343 scopus 로고    scopus 로고
    • Molecular criteria for genus and species discrimination within the family Potyviridae
    • Adams M.J., Antoniw J.F., and Fauquet C.M. Molecular criteria for genus and species discrimination within the family Potyviridae. Arch. Virol. 150 (2004) 459-479
    • (2004) Arch. Virol. , vol.150 , pp. 459-479
    • Adams, M.J.1    Antoniw, J.F.2    Fauquet, C.M.3
  • 2
    • 0037326776 scopus 로고    scopus 로고
    • Genetic diversity in the coat protein coding region of eighty-six sugarcane mosaic virus isolates from eight countries, particularly from Cameroon and Congo
    • Alegria O.M., Royer M., Bousalem M., Chatenet M., Peterschmitt M., Girard J.-C., and Rott P. Genetic diversity in the coat protein coding region of eighty-six sugarcane mosaic virus isolates from eight countries, particularly from Cameroon and Congo. Arch. Virol. 148 (2003) 357-372
    • (2003) Arch. Virol. , vol.148 , pp. 357-372
    • Alegria, O.M.1    Royer, M.2    Bousalem, M.3    Chatenet, M.4    Peterschmitt, M.5    Girard, J.-C.6    Rott, P.7
  • 3
    • 0026229774 scopus 로고
    • Direct amplification of plant genomic DNA from leaf and root pieces using PCR
    • Berthomieu P., and Meyer C. Direct amplification of plant genomic DNA from leaf and root pieces using PCR. Plant Mol. Biol. 17 (1991) 555-557
    • (1991) Plant Mol. Biol. , vol.17 , pp. 555-557
    • Berthomieu, P.1    Meyer, C.2
  • 4
    • 0033813027 scopus 로고    scopus 로고
    • The use of phylogenetic data to develop molecular tools for the detection and genotyping of Yam mosaic virus. Potential application in molecular epidemiology
    • Bousalem M., Dallot S., and Guyader S. The use of phylogenetic data to develop molecular tools for the detection and genotyping of Yam mosaic virus. Potential application in molecular epidemiology. J. Virol. Methods 90 (2000) 25-36
    • (2000) J. Virol. Methods , vol.90 , pp. 25-36
    • Bousalem, M.1    Dallot, S.2    Guyader, S.3
  • 6
    • 33947542174 scopus 로고    scopus 로고
    • A genetic shift in the virus strains that cause mosaic in Louisiana Sugarcane
    • Grisham M.P., and Pan Y.B. A genetic shift in the virus strains that cause mosaic in Louisiana Sugarcane. Plant Dis. 91 (2007) 453-458
    • (2007) Plant Dis. , vol.91 , pp. 453-458
    • Grisham, M.P.1    Pan, Y.B.2
  • 7
    • 33746238500 scopus 로고    scopus 로고
    • Identification of potyviruses infecting vanilla by direct sequencing of a short RT-PCR amplicon
    • Grisoni M., Moles M., Farreyrol K., Rassaby L., Davis R., and Pearson M. Identification of potyviruses infecting vanilla by direct sequencing of a short RT-PCR amplicon. Plant Pathol. 55 (2006) 523-529
    • (2006) Plant Pathol. , vol.55 , pp. 523-529
    • Grisoni, M.1    Moles, M.2    Farreyrol, K.3    Rassaby, L.4    Davis, R.5    Pearson, M.6
  • 8
    • 4544289032 scopus 로고    scopus 로고
    • Comparison of direct binding polymerase chain reaction with recombinant coat protein antibody based dot-blot immunobinding assay and immunocapture-reverse transcription-polymerase chain reaction for the detection of sugarcane streak mosaic virus causing mosaic disease of sugarcane in India
    • Hema M., Savithri H.S., and Sreenivasulu P. Comparison of direct binding polymerase chain reaction with recombinant coat protein antibody based dot-blot immunobinding assay and immunocapture-reverse transcription-polymerase chain reaction for the detection of sugarcane streak mosaic virus causing mosaic disease of sugarcane in India. Curr. Sci. 85 (2003) 1774-1777
    • (2003) Curr. Sci. , vol.85 , pp. 1774-1777
    • Hema, M.1    Savithri, H.S.2    Sreenivasulu, P.3
  • 9
    • 0034089642 scopus 로고    scopus 로고
    • Identification of avian infectious bronchitis virus by direct automated cycle sequencing of the S-1 gene
    • Kingham B.F., Keeler C.L., Nix W.A., Ladman B.S., and Gelb J. Identification of avian infectious bronchitis virus by direct automated cycle sequencing of the S-1 gene. Avian Dis. 44 (2000) 325-335
    • (2000) Avian Dis. , vol.44 , pp. 325-335
    • Kingham, B.F.1    Keeler, C.L.2    Nix, W.A.3    Ladman, B.S.4    Gelb, J.5
  • 11
    • 0034056944 scopus 로고    scopus 로고
    • Differentiation of Poaceae potyviruses by reverse transcription-polymerase chain reaction and restriction analysis
    • Marie-Jeanne V., Ioos R., Peyre J., Alliot B., and Signoret P. Differentiation of Poaceae potyviruses by reverse transcription-polymerase chain reaction and restriction analysis. J. Phytopathol. 148 (2000) 141-151
    • (2000) J. Phytopathol. , vol.148 , pp. 141-151
    • Marie-Jeanne, V.1    Ioos, R.2    Peyre, J.3    Alliot, B.4    Signoret, P.5
  • 12
    • 0033872869 scopus 로고    scopus 로고
    • Severe yellowing outbreaks in tomato in Spain associated with infections of Tomato chlorosis virus
    • Navas-Castillo J., Caemro R., Bueno M., and Moriones E. Severe yellowing outbreaks in tomato in Spain associated with infections of Tomato chlorosis virus. Plant Dis. 84 (2000) 835-837
    • (2000) Plant Dis. , vol.84 , pp. 835-837
    • Navas-Castillo, J.1    Caemro, R.2    Bueno, M.3    Moriones, E.4
  • 15
    • 0004121348 scopus 로고
    • The sugarcane mosaic virus subgroup
    • CAB International, Wallingdorf, United Kingdom pp. 360-371
    • Shukla D.D., Ward C.W., and Brunt A.A. The sugarcane mosaic virus subgroup. The Potyviridae (1994), CAB International, Wallingdorf, United Kingdom pp. 360-371
    • (1994) The Potyviridae
    • Shukla, D.D.1    Ward, C.W.2    Brunt, A.A.3
  • 16
    • 0029096263 scopus 로고
    • Detection of DNA and RNA plant viruses by PCR and RT-PCR using a rapid virus release protocol without tissue homogenization
    • Thomson D., and Dietzgen R.G. Detection of DNA and RNA plant viruses by PCR and RT-PCR using a rapid virus release protocol without tissue homogenization. J. Virol. Methods 54 (1995) 85-95
    • (1995) J. Virol. Methods , vol.54 , pp. 85-95
    • Thomson, D.1    Dietzgen, R.G.2
  • 17
    • 0028851199 scopus 로고
    • Single-step protocol for preparation of plant tissue for analysis by PCR
    • Thomson D., and Henry R. Single-step protocol for preparation of plant tissue for analysis by PCR. BioTechniques 19 (1995) 394-400
    • (1995) BioTechniques , vol.19 , pp. 394-400
    • Thomson, D.1    Henry, R.2
  • 18
    • 44449118316 scopus 로고    scopus 로고
    • Viruses causing mosaic disease in sugarcane and their genetic diversity in southern China
    • Xu D.-L., Park J.-W., Mirkov T.E., and Zhou G.-H. Viruses causing mosaic disease in sugarcane and their genetic diversity in southern China. Arch. Virol. 153 (2008) 1031-1039
    • (2008) Arch. Virol. , vol.153 , pp. 1031-1039
    • Xu, D.-L.1    Park, J.-W.2    Mirkov, T.E.3    Zhou, G.-H.4
  • 19
    • 0030867178 scopus 로고    scopus 로고
    • Sequence and relationships of sugarcane and sorghum mosaic virus strains and development of RT-PCR-based RFLPs for strain discrimination
    • Yang Z.N., and Mirkov T.E. Sequence and relationships of sugarcane and sorghum mosaic virus strains and development of RT-PCR-based RFLPs for strain discrimination. Phytopathology 87 (1997) 932-939
    • (1997) Phytopathology , vol.87 , pp. 932-939
    • Yang, Z.N.1    Mirkov, T.E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.