메뉴 건너뛰기




Volumn 2, Issue 1, 2009, Pages

Database mining for selection of SNP markers useful in admixture mapping

Author keywords

[No Author keywords available]

Indexed keywords

AFRICA; ARTICLE; ETHNICITY; EUROPE; GENE FREQUENCY; GENE MAPPING; GENETIC DATABASE; GENETIC DIFFERENCE; HUMAN; POPULATION GENETICS; PRIORITY JOURNAL; RACE DIFFERENCE; SINGLE NUCLEOTIDE POLYMORPHISM;

EID: 63449138395     PISSN: None     EISSN: 17560381     Source Type: Journal    
DOI: 10.1186/1756-0381-2-1     Document Type: Article
Times cited : (18)

References (40)
  • 1
    • 27144437387 scopus 로고    scopus 로고
    • Will admixture mapping work to find disease genes?
    • 16096110 10.1098/rstb.2005.1691
    • Will admixture mapping work to find disease genes? D Reich N Patterson, Philos Trans R Soc Lond B Biol Sci 2005 360 1460 1605 1607 16096110 10.1098/rstb.2005.1691
    • (2005) Philos Trans R Soc Lond B Biol Sci , vol.360 , Issue.1460 , pp. 1605-1607
    • Reich, D.1    Patterson, N.2
  • 2
    • 0028001245 scopus 로고
    • Mapping by admixture linkage disequilibrium in human populations: Limits and guidelines
    • 7942858
    • Mapping by admixture linkage disequilibrium in human populations: limits and guidelines. JC Stephens D Briscoe SJ O'Brien, Am J Hum Genet 1994 55 4 809 824 7942858
    • (1994) Am J Hum Genet , vol.55 , Issue.4 , pp. 809-824
    • Stephens, J.C.1    Briscoe, D.2    O'Brien, S.J.3
  • 3
    • 0031037972 scopus 로고    scopus 로고
    • Mapping genes underlying ethnic differences in disease risk by linkage disequilibrium in recently admixed populations
    • 8981962
    • Mapping genes underlying ethnic differences in disease risk by linkage disequilibrium in recently admixed populations. PM McKeigue, Am J Hum Genet 1997 60 1 188 196 8981962
    • (1997) Am J Hum Genet , vol.60 , Issue.1 , pp. 188-196
    • McKeigue, P.M.1
  • 4
    • 13144306071 scopus 로고    scopus 로고
    • Genome-wide association studies for common diseases and complex traits
    • 10.1038/nrg1521 15716906
    • Genome-wide association studies for common diseases and complex traits. JN Hirschhorn MJ Daly, Nat Rev Genet 2005 6 2 95 108 10.1038/nrg1521 15716906
    • (2005) Nat Rev Genet , vol.6 , Issue.2 , pp. 95-108
    • Hirschhorn, J.N.1    Daly, M.J.2
  • 5
    • 22944467804 scopus 로고    scopus 로고
    • Mapping by admixture linkage disequilibrium: Advances, limitations and guidelines
    • 10.1038/nrg1657 16012528
    • Mapping by admixture linkage disequilibrium: advances, limitations and guidelines. MW Smith SJ O'Brien, Nat Rev Genet 2005 6 8 623 632 10.1038/nrg1657 16012528
    • (2005) Nat Rev Genet , vol.6 , Issue.8 , pp. 623-632
    • Smith, M.W.1    O'Brien, S.J.2
  • 9
    • 0034752862 scopus 로고    scopus 로고
    • Markers for mapping by admixture linkage disequilibrium in African American and Hispanic populations
    • 11590548 10.1086/323922
    • Markers for mapping by admixture linkage disequilibrium in African American and Hispanic populations. MW Smith JA Lautenberger HD Shin JP Chretien S Shrestha DA Gilbert SJ O'Brien, Am J Hum Genet 2001 69 5 1080 1094 11590548 10.1086/323922
    • (2001) Am J Hum Genet , vol.69 , Issue.5 , pp. 1080-1094
    • Smith, M.W.1    Lautenberger, J.A.2    Shin, H.D.3    Chretien, J.P.4    Shrestha, S.5    Gilbert, D.A.6    O'Brien, S.J.7
  • 12
    • 0347362518 scopus 로고    scopus 로고
    • Informativeness of genetic markers for inference of ancestry
    • 14631557 10.1086/380416
    • Informativeness of genetic markers for inference of ancestry. NA Rosenberg LM Li R Ward JK Pritchard, Am J Hum Genet 2003 73 6 1402 1422 14631557 10.1086/380416
    • (2003) Am J Hum Genet , vol.73 , Issue.6 , pp. 1402-1422
    • Rosenberg, N.A.1    Li, L.M.2    Ward, R.3    Pritchard, J.K.4
  • 14
    • 0028864838 scopus 로고
    • Intra- and inter-population diversity at short tandem repeat loci in diverse populations of the world
    • 10.1002/elps.11501601275 8582352
    • Intra- and inter-population diversity at short tandem repeat loci in diverse populations of the world. R Deka MD Shriver LM Yu RE Ferrell R Chakraborty, Electrophoresis 1995 16 9 1659 1664 10.1002/elps.11501601275 8582352
    • (1995) Electrophoresis , vol.16 , Issue.9 , pp. 1659-1664
    • Deka, R.1    Shriver, M.D.2    Yu, L.M.3    Ferrell, R.E.4    Chakraborty, R.5
  • 15
    • 0042591658 scopus 로고    scopus 로고
    • Human genetic diversity: Lewontin's fallacy
    • 10.1002/bies.10315 12879450
    • Human genetic diversity: Lewontin's fallacy. AW Edwards, Bioessays 2003 25 8 798 801 10.1002/bies.10315 12879450
    • (2003) Bioessays , vol.25 , Issue.8 , pp. 798-801
    • Edwards, A.W.1
  • 18
    • 0036911353 scopus 로고    scopus 로고
    • Interrogating a high-density SNP map for signatures of natural selection
    • 12466284 10.1101/gr.631202
    • Interrogating a high-density SNP map for signatures of natural selection. JM Akey G Zhang K Zhang L Jin MD Shriver, Genome Res 2002 12 12 1805 1814 12466284 10.1101/gr.631202
    • (2002) Genome Res , vol.12 , Issue.12 , pp. 1805-1814
    • Akey, J.M.1    Zhang, G.2    Zhang, K.3    Jin, L.4    Shriver, M.D.5
  • 20
    • 0002629270 scopus 로고
    • Maximum likelihood from incomplete data via the em algorithm
    • Maximum likelihood from incomplete data via the EM algorithm. AP Dempster NM Laird DB Rubin, J R Stat Soc Ser B 1977 39 1 38
    • (1977) J R Stat Soc ser B , vol.39 , pp. 1-38
    • Dempster, A.P.1    Laird, N.M.2    Rubin, D.B.3
  • 21
    • 0242391947 scopus 로고    scopus 로고
    • Genome-wide evaluation of the public SNP databases
    • 10.1517/phgs.4.6.779.22821 14596641
    • Genome-wide evaluation of the public SNP databases. R Jiang J Duan A Windemuth JC Stephens R Judson C Xu, Pharmacogenomics 2003 4 6 779 789 10.1517/phgs.4.6.779.22821 14596641
    • (2003) Pharmacogenomics , vol.4 , Issue.6 , pp. 779-789
    • Jiang, R.1    Duan, J.2    Windemuth, A.3    Stephens, J.C.4    Judson, R.5    Xu, C.6
  • 24
    • 33746514942 scopus 로고    scopus 로고
    • Mining the HapMap to dissect complex traits
    • 16569264 10.1186/gb-2006-7-3-310
    • Mining the HapMap to dissect complex traits. SK Kim J Borevitz, Genome Biol 2006 7 3 310 16569264 10.1186/gb-2006-7-3-310
    • (2006) Genome Biol , vol.7 , Issue.3 , pp. 310
    • Kim, S.K.1    Borevitz, J.2
  • 25
    • 33645833007 scopus 로고    scopus 로고
    • Ancestry vs physical traits: The search for ancestry informative markers (AIMs)
    • author reply 190. 10.1007/s00414-005-0032-3 16133562
    • Ancestry vs physical traits: the search for ancestry informative markers (AIMs). A Salas C Phillips A Carracedo, Int J Legal Med 2006 120 3 188 189 author reply 190. 10.1007/s00414-005-0032-3 16133562
    • (2006) Int J Legal Med , vol.120 , Issue.3 , pp. 188-189
    • Salas, A.1    Phillips, C.2    Carracedo, A.3
  • 26
    • 79959524146 scopus 로고    scopus 로고
    • A haplotype map of the human genome
    • 16255080 10.1038/nature04226
    • A haplotype map of the human genome. D Altshuler LD Brooks A Chakravarti, Nature 2005 437 7063 1299 1320 16255080 10.1038/nature04226
    • (2005) Nature , vol.437 , Issue.7063 , pp. 1299-1320
    • Altshuler, D.1    Brooks, L.D.2    Chakravarti, A.3
  • 27
    • 27544446224 scopus 로고    scopus 로고
    • The International HapMap Project Web site
    • 16251469 10.1101/gr.4413105
    • The International HapMap Project Web site. GA Thorisson AV Smith L Krishnan LD Stein, Genome Res 2005 15 11 1592 1593 16251469 10.1101/gr.4413105
    • (2005) Genome Res , vol.15 , Issue.11 , pp. 1592-1593
    • Thorisson, G.A.1    Smith, A.V.2    Krishnan, L.3    Stein, L.D.4
  • 28
    • 33746826959 scopus 로고    scopus 로고
    • Clinical applications of whole-genome association studies: Future applications at the bedside
    • 10.1586/14737159.6.4.551 16824029
    • Clinical applications of whole-genome association studies: future applications at the bedside. AA Motsinger MD Ritchie SE Dobrin, Expert Rev Mol Diagn 2006 6 4 551 565 10.1586/14737159.6.4.551 16824029
    • (2006) Expert Rev Mol Diagn , vol.6 , Issue.4 , pp. 551-565
    • Motsinger, A.A.1    Ritchie, M.D.2    Dobrin, S.E.3
  • 29
    • 63449089895 scopus 로고    scopus 로고
    • Cary, NC: SAS Institute Inc
    • SAS ver. 9.1.3. SAS I, Cary, NC: SAS Institute Inc 2002
    • (2002) SAS Ver. 9.1.3
    • Sas, I.1
  • 31
    • 26844482093 scopus 로고    scopus 로고
    • A fine-scale map of recombination rates and hotspots across the human genome
    • 10.1126/science.1117196 16224025
    • A fine-scale map of recombination rates and hotspots across the human genome. S Myers L Bottolo C Freeman G McVean P Donnelly, Science 2005 310 5746 321 324 10.1126/science.1117196 16224025
    • (2005) Science , vol.310 , Issue.5746 , pp. 321-324
    • Myers, S.1    Bottolo, L.2    Freeman, C.3    McVean, G.4    Donnelly, P.5
  • 32
    • 0032231748 scopus 로고    scopus 로고
    • Mapping genes that underlie ethnic differences in disease risk: Methods for detecting linkage in admixed populations, by conditioning on parental admixture
    • 9634509 10.1086/301908
    • Mapping genes that underlie ethnic differences in disease risk: methods for detecting linkage in admixed populations, by conditioning on parental admixture. PM McKeigue, Am J Hum Genet 1998 63 1 241 251 9634509 10.1086/301908
    • (1998) Am J Hum Genet , vol.63 , Issue.1 , pp. 241-251
    • McKeigue, P.M.1
  • 34
    • 0346373654 scopus 로고    scopus 로고
    • Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium
    • 14681826 10.1086/381000
    • Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium. CS Carlson MA Eberle MJ Rieder Q Yi L Kruglyak DA Nickerson, Am J Hum Genet 2004 74 1 106 120 14681826 10.1086/381000
    • (2004) Am J Hum Genet , vol.74 , Issue.1 , pp. 106-120
    • Carlson, C.S.1    Eberle, M.A.2    Rieder, M.J.3    Yi, Q.4    Kruglyak, L.5    Nickerson, D.A.6
  • 36
    • 0036275761 scopus 로고    scopus 로고
    • Counterpoint: Bias from population stratification is not a major threat to the validity of conclusions from epidemiological studies of common polymorphisms and cancer
    • 12050091
    • Counterpoint: bias from population stratification is not a major threat to the validity of conclusions from epidemiological studies of common polymorphisms and cancer. S Wacholder N Rothman N Caporaso, Cancer Epidemiol Biomarkers Prev 2002 11 6 513 520 12050091
    • (2002) Cancer Epidemiol Biomarkers Prev , vol.11 , Issue.6 , pp. 513-520
    • Wacholder, S.1    Rothman, N.2    Caporaso, N.3
  • 39
    • 0035451780 scopus 로고    scopus 로고
    • On the allelic spectrum of human disease
    • 10.1016/S0168-9525(01)02410-6 11525833
    • On the allelic spectrum of human disease. DE Reich ES Lander, Trends Genet 2001 17 9 502 510 10.1016/S0168-9525(01)02410-6 11525833
    • (2001) Trends Genet , vol.17 , Issue.9 , pp. 502-510
    • Reich, D.E.1    Lander, E.S.2
  • 40
    • 33748784339 scopus 로고    scopus 로고
    • Navigating the HapMap
    • 10.1093/bib/bbl021 16877472
    • Navigating the HapMap. MR Barnes, Brief Bioinform 2006 7 3 211 224 10.1093/bib/bbl021 16877472
    • (2006) Brief Bioinform , vol.7 , Issue.3 , pp. 211-224
    • Barnes, M.R.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.