Can bladder adenocarcinomas be distinguished from schistosomiasis-associated bladder cancers by using array comparative genomic hybridization analysis?

Cancer Genetics and Cytogenetics

Volumn 177, Issue 2, 2007, Pages 153-157

  Vauhkonen, Hanna ^a   Böhling, Tom ^a   Eissa, Saad ^b   Shoman, Sohair ^c   Knuutila, Sakari ^a  

^a UNIVERSITY OF HELSINKI   (Finland)

^b NATIONAL CANCER INSTITUTE   (Egypt)

^c NONE

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

ADULT; AGED; ARTICLE; BLADDER CANCER; BLADDER CARCINOMA; CHROMOSOME 20Q; CHROMOSOME 5Q; CHROMOSOME 8P; CHROMOSOME 8Q; CLINICAL ARTICLE; COMPARATIVE GENOMIC HYBRIDIZATION; DNA DETERMINATION; DNA MICROARRAY; FEMALE; GENE AMPLIFICATION; GENE FREQUENCY; GENE LOSS; GENE STRUCTURE; HISTOPATHOLOGY; HUMAN; HUMAN TISSUE; MALE; MALIGNANT TRANSFORMATION; PRIORITY JOURNAL; SCHISTOSOMIASIS; SQUAMOUS CELL CARCINOMA; TISSUE SECTION; TRANSITIONAL CELL CARCINOMA;

AGED; CARCINOMA, SQUAMOUS CELL; CARCINOMA, TRANSITIONAL CELL; CASE-CONTROL STUDIES; CHROMOSOMES, HUMAN; DNA, NEOPLASM; FEMALE; GENE DOSAGE; GENE EXPRESSION PROFILING; HUMANS; KARYOTYPING; LYMPHOCYTES; MALE; MIDDLE AGED; NEOPLASM STAGING; NUCLEIC ACID HYBRIDIZATION; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; SCHISTOSOMIASIS; URINARY BLADDER NEOPLASMS;

EID: 34548543757     PISSN: 01654608     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cancergencyto.2007.06.017     Document Type: Article

References (20)

1. Johansson S.L., and Cohen S.M. Epidemiology and etiology of bladder cancer. Semin Surg Oncol 13 (1997) 291-298
2. Dahm P., and Gschwend J.E. Malignant non-urothelial neoplasms of the urinary bladder: a review. Eur Urol 44 (2003) 672-681
3. Gutierrez M.I., Siraj A.K., Khaled H., Koon N., El-Rifai W., and Bhatia K. CpG island methylation in Schistosoma- and non-Schistosoma-associated bladder cancer. Mod Pathol 17 (2004) 1268-1274
4. Sandberg A.A. Cytogenetics and molecular genetics of bladder cancer: a personal view. Am J Med Genet 115 (2002) 173-182
5. Lengauer C., Kinzler K.W., and Vogelstein B. Genetic instability in human cancers. Nature 396 (1998) 643-649
6. Kallioniemi A., Kallioniemi O.P., Sudar D., Rutovitz D., Gray J.W., Waldman F., and Pinkel D. Comparative genomic hybridization for molecular cytogenetic analysis of solid tumors. Science 258 (1992) 818-821
7. Pinkel D., Segraves R., Sudar D., Clark S., Poole I., Kowbel D., Collins C., Kuo W.L., Chen C., Zhai Y., Dairkee S.H., Ljung B.M., Gray J.W., and Albertson D.G. High resolution analysis of DNA copy number variation using comparative genomic hybridization. Nat Genet 20 (1998) 207-211
8. Pollack J.R., Perou C.M., Alizadeh A.A., Eisen M.B., Pergamenschikov A., Williams C.F., Jeffrey S.S., Botstein D., and Brown P.O. Genome-wide analysis of DNA copy-number changes using cDNA microarrays. Nat Genet 23 (1999) 41-46
9. Selzer R.R., Richmond T.A., Pofahl N.J., Green R.D., Eis P.S., Nair P., Brothman A.R., and Stallings R.L. Analysis of chromosome breakpoints in neuroblastoma at sub-kilobase resolution using fine-tiling oligonucleotide array CGH. Genes Chromosomes Cancer 44 (2005) 305-319
10. Tyybakinoja A., Saarinen-Pihkala U., Elonen E., and Knuutila S. Amplified, lost, and fused genes in 11q23-25 amplicon in acute myeloid leukemia, an array-CGH study. Genes Chromosomes Cancer 45 (2006) 257-264
11. Koo S.H., Kwon K.C., Ihm C.H., Jeon Y.M., Park J.W., and Sul C.K. Detection of genetic alterations in bladder tumors by comparative genomic hybridization and cytogenetic analysis. Cancer Genet Cytogenet 110 (1999) 87-93
12. Veltman J.A., Fridlyand J., Pejavar S., Olshen A.B., Korkola J.E., DeVries S., Carroll P., Kuo W.L., Pinkel D., Albertson D., Cordon-Cardo C., Jain A.N., and Waldman F.M. Array-based comparative genomic hybridization for genome-wide screening of DNA copy number in bladder tumors. Cancer Res 63 (2003) 2872-2880
13. Hurst C.D., Fiegler H., Carr P., Williams S., Carter N.P., and Knowles M.A. High-resolution analysis of genomic copy number alterations in bladder cancer by microarray-based comparative genomic hybridization. Oncogene 23 (2004) 2250-2263
14. Oeggerli M., Schraml P., Ruiz C., Bloch M., Novotny H., Mirlacher M., Sauter G., and Simon R. E2F3 is the main target gene of the 6p22 amplicon with high specificity for human bladder cancer. Oncogene 25 (2006) 6538-6543
15. Knuutila S., Autio K., and Aalto Y. Online access to CGH data of DNA sequence copy number changes. Am J Pathol 157 (2000) 689
16. Muscheck M., Abol-Enein H., Chew K., Moore II D., Bhargava V., Ghoneim M.A., Carroll P.R., and Waldman F.M. Comparison of genetic changes in schistosome-related transitional and squamous bladder cancers using comparative genomic hybridization. Carcinogenesis 21 (2000) 1721-1726
17. El-Rifai W., Kamel D., Larramendy M.L., Shoman S., Gad Y., Baithun S., El-Awady M., Eissa S., Khaled H., Soloneski S., Sheaff M., and Knuutila S. DNA copy number changes in Schistosoma-associated and non-Schistosoma-associated bladder cancer. Am J Pathol 156 (2000) 871-878
18. Armengol G, Eissa S, Lozano JJ, Shoman S, Sumoy L, Caballin MR, Knuutila S. Genomic imbalances in schistosoma-associated and non-schistoma-associated bladder carcinoma. An array CGH analysis. Cancer Genet Cytogenet (in press).
19. Gorringe K.L., Boussioutas A., and Bowtell D.D. Novel regions of chromosomal amplification at 6p21, 5p13, and 12q14 in gastric cancer identified by array comparative genomic hybridization. Genes Chromosomes Cancer 42 (2005) 247-259
20. Snijders A.M., Schmidt B.L., Fridlyand J., Dekker N., Pinkel D., Jordan R.C., and Albertson D.G. Rare amplicons implicate frequent deregulation of cell fate specification pathways in oral squamous cell carcinoma. Oncogene 24 (2005) 4232-4242 4232-2