-
1
-
-
0037032835
-
The protein kinase complement of human genome
-
Manning G, Whyte DB, Martinez R, Hunter T, Sudarsanam S. The protein kinase complement of human genome. Science 2002;298:1912-1934.
-
(2002)
Science
, vol.298
, pp. 1912-1934
-
-
Manning, G.1
Whyte, D.B.2
Martinez, R.3
Hunter, T.4
Sudarsanam, S.5
-
2
-
-
0028138150
-
Identification of phosphorylated peptides from complex mixtures using negative-ion orifice-potential stepping and capillary liquid chromatography/ electrospray ionization mass spectrometry
-
Ding J, Burkhart W, Kassel DB. Identification of phosphorylated peptides from complex mixtures using negative-ion orifice-potential stepping and capillary liquid chromatography/ electrospray ionization mass spectrometry. Rapid Commun Mass Spectrom 1994;8:94-98.
-
(1994)
Rapid Commun Mass Spectrom
, vol.8
, pp. 94-98
-
-
Ding, J.1
Burkhart, W.2
Kassel, D.B.3
-
3
-
-
11444263845
-
Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry
-
Nüshe TS, Stensballe A, Jensen ON, Peck SC. Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. Mol Cell Proteomics 2003;2:1234-1243.
-
(2003)
Mol Cell Proteomics
, vol.2
, pp. 1234-1243
-
-
Nüshe, T.S.1
Stensballe, A.2
Jensen, O.N.3
Peck, S.C.4
-
4
-
-
0038047139
-
Mass spectrometry and site-directed mutagenesis identify several autophosphorylated residues required for the activity of PrkC, a Ser/Thr kinase from Bacillus subtilis
-
Madec E, Stensballe A, Kajllström S, et al. Mass spectrometry and site-directed mutagenesis identify several autophosphorylated residues required for the activity of PrkC, a Ser/Thr kinase from Bacillus subtilis. J Mol Biol 2003;330:459-472.
-
(2003)
J Mol Biol
, vol.330
, pp. 459-472
-
-
Madec, E.1
Stensballe, A.2
Kajllström, S.3
-
5
-
-
0042386232
-
Exploiting the complementary nature of LC/MALDI/MS/MS and LC/ ESI/MS/MS for increased proteome coverage
-
Bodnar WM, Blackburn RK, Krise JM, Moseley MA. Exploiting the complementary nature of LC/MALDI/MS/MS and LC/ ESI/MS/MS for increased proteome coverage. J Am Soc Mass Spectrom 2003;14:971-979.
-
(2003)
J Am Soc Mass Spectrom
, vol.14
, pp. 971-979
-
-
Bodnar, W.M.1
Blackburn, R.K.2
Krise, J.M.3
Moseley, M.A.4
-
6
-
-
21044458153
-
Identification of phosphopeptides by MALDI Q-TOF MS in positive and negative ion modes after methyl esterification
-
Xu CF, Lu Y, Ma J, Mohammadi M, Neubert TA. Identification of phosphopeptides by MALDI Q-TOF MS in positive and negative ion modes after methyl esterification. Mol Cell Proteomics 2005;4:809-818.
-
(2005)
Mol Cell Proteomics
, vol.4
, pp. 809-818
-
-
Xu, C.F.1
Lu, Y.2
Ma, J.3
Mohammadi, M.4
Neubert, T.A.5
-
7
-
-
3543067486
-
Phosphoric acid enhances the performance of Fe(III) affinity chromatography and matrix-assisted laser desorption/ionization tandem mass spectrometry for recovery, detection and sequencing of phosphopeptides
-
Stensballe A, Jensen ON. Phosphoric acid enhances the performance of Fe(III) affinity chromatography and matrix-assisted laser desorption/ionization tandem mass spectrometry for recovery, detection and sequencing of phosphopeptides. Rapid Commun Mass Spectrom 2004;18:1721-1730.
-
(2004)
Rapid Commun Mass Spectrom
, vol.18
, pp. 1721-1730
-
-
Stensballe, A.1
Jensen, O.N.2
-
8
-
-
0033562834
-
Iron (III)-immobilized metal ion affinity chromatography and mass spectrometry for the purification and characterization of synthetic phosphopeptides
-
Li SH, Dass C. Iron (III)-immobilized metal ion affinity chromatography and mass spectrometry for the purification and characterization of synthetic phosphopeptides. Anal Biochem 1999;270:9-14.
-
(1999)
Anal Biochem
, vol.270
, pp. 9-14
-
-
Li, S.H.1
Dass, C.2
-
9
-
-
0030667705
-
Evidence for phosphorylation of serine 753 in CTTR using a novel metal-ion affinity resin and matrix-assisted laser desorption mass spectrometry
-
Neville DCA, Rozanas CR, Price EM, et al. Evidence for phosphorylation of serine 753 in CTTR using a novel metal-ion affinity resin and matrix-assisted laser desorption mass spectrometry. Protein Sci 1997;6:2436-2445.
-
(1997)
Protein Sci
, vol.6
, pp. 2436-2445
-
-
Neville, D.C.A.1
Rozanas, C.R.2
Price, E.M.3
-
10
-
-
0036198435
-
Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae
-
Ficarro SB, McCleland ML, Stukenberg PT, et al. Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae. Nat Biotechnol 2002;20:301-305.
-
(2002)
Nat Biotechnol
, vol.20
, pp. 301-305
-
-
Ficarro, S.B.1
McCleland, M.L.2
Stukenberg, P.T.3
-
11
-
-
0033810757
-
Mapping the phosphorylation sites of proteins using on-line immobilized metal affinity chromatography/ capillary electrophoresis/electrospray ionization multiple stage tandem mass spectrometry
-
Cao P, Stults JT. Mapping the phosphorylation sites of proteins using on-line immobilized metal affinity chromatography/ capillary electrophoresis/electrospray ionization multiple stage tandem mass spectrometry. Rapid Commun Mass Spectrom 2000;14:1600-1606.
-
(2000)
Rapid Commun Mass Spectrom
, vol.14
, pp. 1600-1606
-
-
Cao, P.1
Stults, J.T.2
-
12
-
-
11244277183
-
Automated immobilized metal affinity chromatography/nano-liquid chromatography/ electrospray ionization mass spectrometry platform for profiling protein phosphorylation sites
-
Ficarro SB, Salomon AR, Brill LM, et al. Automated immobilized metal affinity chromatography/nano-liquid chromatography/ electrospray ionization mass spectrometry platform for profiling protein phosphorylation sites. Rapid Commu Mass Spectrom 2005;19:57-71.
-
(2005)
Rapid Commu Mass Spectrom
, vol.19
, pp. 57-71
-
-
Ficarro, S.B.1
Salomon, A.R.2
Brill, L.M.3
-
13
-
-
33846587155
-
Optimization of phosphopeptide elution conditions in immobilized Fe (III) affinity chromatography
-
Imanishi, SY, Kochin V, Eriksson JE. Optimization of phosphopeptide elution conditions in immobilized Fe (III) affinity chromatography. Proteomics 2007;7:174-176.
-
(2007)
Proteomics
, vol.7
, pp. 174-176
-
-
Imanishi, S.Y.1
Kochin, V.2
Eriksson, J.E.3
-
14
-
-
25644449539
-
Formation of phosphopeptide-metal ion complexes in liquid chromatography/electrospray mass spectrometry and their influence on phosphopeptide detection
-
Liu S, Zhang C, Campbell JL, Zhang H, Yeung KKC, Han VKM, Lajoie GA. Formation of phosphopeptide-metal ion complexes in liquid chromatography/electrospray mass spectrometry and their influence on phosphopeptide detection. Rapid Commun Mass Spectrom 2005;19:2747-2756.
-
(2005)
Rapid Commun Mass Spectrom
, vol.19
, pp. 2747-2756
-
-
Liu, S.1
Zhang, C.2
Campbell, J.L.3
Zhang, H.4
Yeung, K.K.C.5
Han, V.K.M.6
Lajoie, G.A.7
-
15
-
-
43949166278
-
Electrospray-ionization mass spectrometry of phosphopeptides isolated by online immobilized metal-ion affinity chromatography
-
Nuwaysir LM, Stults JT. Electrospray-ionization mass spectrometry of phosphopeptides isolated by online immobilized metal-ion affinity chromatography. J Am Soc Mass Spectrom 1993;4:662-669.
-
(1993)
J Am Soc Mass Spectrom
, vol.4
, pp. 662-669
-
-
Nuwaysir, L.M.1
Stults, J.T.2
-
16
-
-
4544252019
-
Phosphoproteome analysis of mouse liver using immobilized metal affinity purification and linear ion trap mass spectrometry
-
Jin WH, Dai J, Zhou H, Xia QC, Zou HF, Zeng R. Phosphoproteome analysis of mouse liver using immobilized metal affinity purification and linear ion trap mass spectrometry. Rapid Commun Mass Spectrom 2004;18:2169.
-
(2004)
Rapid Commun Mass Spectrom
, vol.18
, pp. 2169
-
-
Jin, W.H.1
Dai, J.2
Zhou, H.3
Xia, Q.C.4
Zou, H.F.5
Zeng, R.6
-
17
-
-
0035258256
-
Characterization of phosphoproteins from electrophoretic gels by nanoscale Fe (III) affinity chromatography with off-line mass spectrometry analysis
-
Stensballe A, Andersen S, Jensen ON. Characterization of phosphoproteins from electrophoretic gels by nanoscale Fe (III) affinity chromatography with off-line mass spectrometry analysis. Proteomics 2001;1:207.
-
(2001)
Proteomics
, vol.1
, pp. 207
-
-
Stensballe, A.1
Andersen, S.2
Jensen, O.N.3
-
18
-
-
3242698721
-
Open tubular immobilized metal ion affinity chromatography combined with MALDI MS and MS/MS for identification of protein phosphorylation sites
-
Liu H, Stupak J, Zheng J, et al. Open tubular immobilized metal ion affinity chromatography combined with MALDI MS and MS/MS for identification of protein phosphorylation sites. Anal Chem 2004;76:4223-4232.
-
(2004)
Anal Chem
, vol.76
, pp. 4223-4232
-
-
Liu, H.1
Stupak, J.2
Zheng, J.3
-
19
-
-
14044254894
-
Grant SGN. Proteomic analysis of in vivo phosphorylated synaptic proteins
-
Collins MO, Yu L, Coba MP, et al, Grant SGN. Proteomic analysis of in vivo phosphorylated synaptic proteins. J Biol Chem 2005;280:5972-5982.
-
(2005)
J Biol Chem
, vol.280
, pp. 5972-5982
-
-
Collins, M.O.1
Yu, L.2
Coba, M.P.3
-
20
-
-
15244359104
-
Phosphorylation state of postsynaptic density proteins
-
Trinidad JC, Thalhammer A, Specht CG, Schoepfer R, Burlingame, AL. Phosphorylation state of postsynaptic density proteins. J Neurochem 2005;92:1306-1316.
-
(2005)
J Neurochem
, vol.92
, pp. 1306-1316
-
-
Trinidad, J.C.1
Thalhammer, A.2
Specht, C.G.3
Schoepfer, R.4
Burlingame, A.L.5
-
22
-
-
0037295405
-
Nanoelectrospray-based detection and sequencing of substoichiometry amounts of phosphopeptides in complex mixtures
-
Köcher T, Allmaier G, Wilm M. Nanoelectrospray-based detection and sequencing of substoichiometry amounts of phosphopeptides in complex mixtures. J Mass Spectrom 2003;38:131-137.
-
(2003)
J Mass Spectrom
, vol.38
, pp. 131-137
-
-
Köcher, T.1
Allmaier, G.2
Wilm, M.3
-
23
-
-
42649139982
-
SIMAC (Sequential Elution from IMAC), a phosphoproteomics strategy for the rapid separation of monophosphorylated from multiply phosphorylated peptides
-
Thingholm TE, Jensen ON, Robinson PJ, Larsen MR. SIMAC (Sequential Elution from IMAC), a phosphoproteomics strategy for the rapid separation of monophosphorylated from multiply phosphorylated peptides. Mol Cell Proteomics 2008;7:661-671.
-
(2008)
Mol Cell Proteomics
, vol.7
, pp. 661-671
-
-
Thingholm, T.E.1
Jensen, O.N.2
Robinson, P.J.3
Larsen, M.R.4
-
24
-
-
0028978254
-
Importance of α-amino group in the selective purification of synthetic histidine peptides by immobilized metal ion affinity chromatography
-
Hansen P, Lindeberg G. Importance of α-amino group in the selective purification of synthetic histidine peptides by immobilized metal ion affinity chromatography. J Chromatogr A 1995;690:155.
-
(1995)
J Chromatogr A
, vol.690
, pp. 155
-
-
Hansen, P.1
Lindeberg, G.2
-
25
-
-
0037172367
-
Simplification of complex tryptic digests for capillary electrophoresis by affinity selection of histidine-containing peptides with immobilized metal ion affinity chromatography
-
Ahmad A, Chakraborty A, Regnier FE. Simplification of complex tryptic digests for capillary electrophoresis by affinity selection of histidine-containing peptides with immobilized metal ion affinity chromatography. J Chromatogr B, Biomed Sci Appl 2002;772:35-44.
-
(2002)
J Chromatogr B, Biomed Sci Appl
, vol.772
, pp. 35-44
-
-
Ahmad, A.1
Chakraborty, A.2
Regnier, F.E.3
-
26
-
-
0022541790
-
Isolation of phosphoproteins by immobilized metal (Fe3+) affinity chromatography
-
Anderson L, Porath JO. Isolation of phosphoproteins by immobilized metal (Fe3+) affinity chromatography. Anal Biochem 1986;154:250-254.
-
(1986)
Anal Biochem
, vol.154
, pp. 250-254
-
-
Anderson, L.1
Porath, J.O.2
-
27
-
-
0023022190
-
Selective adsorption of phosphoproteins on gel-immobilized ferric chelate
-
Muszynska G, Anderson L, Porath JO. Selective adsorption of phosphoproteins on gel-immobilized ferric chelate. Biochemistry 1986; 25:6850-6853.
-
(1986)
Biochemistry
, vol.25
, pp. 6850-6853
-
-
Muszynska, G.1
Anderson, L.2
Porath, J.O.3
-
28
-
-
0026777405
-
Model studies on iron (III) ion affinity chromatography: II. Intercation of immobilized iron (III) ions with phosphorylated amino acids, peptides and proteins
-
Muszynska G, Dobrowolska G, Medin A, Ekman P, Porath JO. Model studies on iron (III) ion affinity chromatography: II. Intercation of immobilized iron (III) ions with phosphorylated amino acids, peptides and proteins. J Chromatogr 1992; 604:19-28.
-
(1992)
J Chromatogr
, vol.604
, pp. 19-28
-
-
Muszynska, G.1
Dobrowolska, G.2
Medin, A.3
Ekman, P.4
Porath, J.O.5
-
29
-
-
0031241394
-
Identification and characterization of posttranslational modification of proteins by MALDI ion trap mass spectrometry
-
Qin J, Chait BT. Identification and characterization of posttranslational modification of proteins by MALDI ion trap mass spectrometry. Anal Chem 1997;69:4002-4009.
-
(1997)
Anal Chem
, vol.69
, pp. 4002-4009
-
-
Qin, J.1
Chait, B.T.2
-
30
-
-
0033565503
-
Immobilized gallium (III) affinity chromatography of phosphopeptides
-
Posewitz MC, Tempst P. Immobilized gallium (III) affinity chromatography of phosphopeptides. Anal Chem 1999;71:2883-2892.
-
(1999)
Anal Chem
, vol.71
, pp. 2883-2892
-
-
Posewitz, M.C.1
Tempst, P.2
-
31
-
-
3242688830
-
Selective isolation at the fentomole level of phosphopeptides from proteolytic digests using 2D-NanoLC-ESI-MS/MS and titanium oxide precolumns
-
Pinske MW, Uitto PM, Hilhorst MJ, Ooms B, Heck A. Selective isolation at the fentomole level of phosphopeptides from proteolytic digests using 2D-NanoLC-ESI-MS/MS and titanium oxide precolumns. Anal Chem 2004;76:3935-3943.
-
(2004)
Anal Chem
, vol.76
, pp. 3935-3943
-
-
Pinske, M.W.1
Uitto, P.M.2
Hilhorst, M.J.3
Ooms, B.4
Heck, A.5
-
32
-
-
24944519450
-
Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns
-
Larsen MR, Thingholm TE, Jensen ON, Roepstroff P, Jørgensen TJD. Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns. Mol Cell Proteomics 2005;4:873-886.
-
(2005)
Mol Cell Proteomics
, vol.4
, pp. 873-886
-
-
Larsen, M.R.1
Thingholm, T.E.2
Jensen, O.N.3
Roepstroff, P.4
Jørgensen, T.J.D.5
-
33
-
-
23744460968
-
Specificity of immobilized metal affinity-based IMAC/C18 tip enrichment of phosphopeptides for protein phosphorylation analysis
-
Kokubu M, Ishihama Y, Sato T, Nagasu T, Oda Y. Specificity of immobilized metal affinity-based IMAC/C18 tip enrichment of phosphopeptides for protein phosphorylation analysis. Anal Chem 2005;77:5144-5154.
-
(2005)
Anal Chem
, vol.77
, pp. 5144-5154
-
-
Kokubu, M.1
Ishihama, Y.2
Sato, T.3
Nagasu, T.4
Oda, Y.5
-
34
-
-
36749031608
-
Highly efficient phosphopeptide enrichment by calcium phosphate precipitation combined with subseqient IMAC enrichment
-
Zhang X, Ye J, Jensen ON, Roepstorff P. Highly efficient phosphopeptide enrichment by calcium phosphate precipitation combined with subseqient IMAC enrichment. Mol Cell Proteomics 2007;6:2032-2042.
-
(2007)
Mol Cell Proteomics
, vol.6
, pp. 2032-2042
-
-
Zhang, X.1
Ye, J.2
Jensen, O.N.3
Roepstorff, P.4
-
35
-
-
84862908545
-
Stability of metal ion complexes formed with methyl phosphate and hydrogen phosphate
-
Saha A, Saha N, Ji LN, Zhao J, Gregan F, Sajadi SAA, Song B, Sigel H. Stability of metal ion complexes formed with methyl phosphate and hydrogen phosphate. J Biol Inorg Chem 1996;1:231-238.
-
(1996)
J Biol Inorg Chem
, vol.1
, pp. 231-238
-
-
Saha, A.1
Saha, N.2
Ji, L.N.3
Zhao, J.4
Gregan, F.5
Sajadi, S.A.A.6
Song, B.7
Sigel, H.8
-
36
-
-
0036731069
-
Factors governing the solubilization of phosphopeptides retained on Ferric NTA IMAC beads and their analysis by MALDI TOF MS
-
Hart SR, Waterfield MD, Burlingame AL, Cramer R. Factors governing the solubilization of phosphopeptides retained on Ferric NTA IMAC beads and their analysis by MALDI TOF MS. J Am Soc Mass Spectrom 2002;13:1042-1051.
-
(2002)
J Am Soc Mass Spectrom
, vol.13
, pp. 1042-1051
-
-
Hart, S.R.1
Waterfield, M.D.2
Burlingame, A.L.3
Cramer, R.4
-
37
-
-
34250827346
-
Identification of histidine phosphorylations in proteins using mass spectrometry and affinity based techniques
-
Ross ARA. Identification of histidine phosphorylations in proteins using mass spectrometry and affinity based techniques. Methods Enzymol 2007;423:549-572.
-
(2007)
Methods Enzymol
, vol.423
, pp. 549-572
-
-
Ross, A.R.A.1
-
38
-
-
0028302337
-
Reference points for comparisons of two-dimentional maps of proteins from different human cell types defined in a pH scale where isoelectric points correlate with polypeptide compositions
-
Bjellqvist B, Basse B, Olsen E, Celis JE. Reference points for comparisons of two-dimentional maps of proteins from different human cell types defined in a pH scale where isoelectric points correlate with polypeptide compositions. Electrophoresis 1994;15:529-539.
-
(1994)
Electrophoresis
, vol.15
, pp. 529-539
-
-
Bjellqvist, B.1
Basse, B.2
Olsen, E.3
Celis, J.E.4
-
39
-
-
0016192651
-
Surface tension of amino acid solutions: A hydrophobicity scale of the amino acid residues
-
Bull HB, Breese K. Surface tension of amino acid solutions: a hydrophobicity scale of the amino acid residues. Arch Bioch Biophys 1974;161:665-670.
-
(1974)
Arch Bioch Biophys
, vol.161
, pp. 665-670
-
-
Bull, H.B.1
Breese, K.2
-
40
-
-
34548151246
-
Development of titanium dioxide nanoparticle pipette-tip for the selective enrichment of phosphorylated peptides
-
Hsieh HC, Sheu C, Shi FK, Li DT. Development of titanium dioxide nanoparticle pipette-tip for the selective enrichment of phosphorylated peptides. J Chromatogr A 2007;1165:128-135.
-
(2007)
J Chromatogr A
, vol.1165
, pp. 128-135
-
-
Hsieh, H.C.1
Sheu, C.2
Shi, F.K.3
Li, D.T.4
-
43
-
-
34548405248
-
Reference-facilitated phosphoproteomics: Fast and reliable phosphopeptide validation by micro LC-ESI-Q-TOF MS/MS
-
Imanishi SY, Kochin V, Ferraris SE, de Thonel A, Pallari HM, Corthals GL, Eriksson JE. Reference-facilitated phosphoproteomics: fast and reliable phosphopeptide validation by micro LC-ESI-Q-TOF MS/MS. Mol Cell Proteomics 2007;6:1380-1391.
-
(2007)
Mol Cell Proteomics
, vol.6
, pp. 1380-1391
-
-
Imanishi, S.Y.1
Kochin, V.2
Ferraris, S.E.3
de Thonel, A.4
Pallari, H.M.5
Corthals, G.L.6
Eriksson, J.E.7
-
44
-
-
84867530312
-
-
UniProtKB/Swiss-Prot accession P02662 [CASA1_BOVIN]
-
UniProtKB/Swiss-Prot accession P02662 [CASA1_BOVIN] Alpha-S1-casein; http://us.expasy.org/cgi-bin/niceprot.pl?P02662.
-
Alpha-S1-casein
-
-
-
45
-
-
84867539402
-
-
UniProtKB/Swiss-Prot accession P02663 [CASA2_BOVIN]
-
UniProtKB/Swiss-Prot accession P02663 [CASA2_BOVIN] Alpha-S2-casein; http://us.expasy.org/cgi-bin/niceprot.pl?P02663.
-
Alpha-S2-casein
-
-
|