Reducing radiation damage in macromolecular crystals at synchrotron sources

Acta Crystallographica Section D: Biological Crystallography

Volumn 65, Issue 4, 2009, Pages 366-374

  Stern, Edward A ^a   Yacoby, Yizhak ^b   Seidler, Gerald T ^a   Nagle, Kenneth P ^a   Prange, Micah P ^a   Sorini, Adam P ^a   Rehr, John J ^a   Joachimiak, Andrzej ^c  

^a UNIVERSITY OF WASHINGTON   (United States)

^b HEBREW UNIVERSITY OF JERUSALEM   (Israel)

^c ARGONNE NATIONAL LABORATORY   (United States)

Author keywords

FEFF; Radiation damage

Indexed keywords

PROTEIN;

ALGORITHM; ARTICLE; CHEMISTRY; CLASSIFICATION; ELECTRON; FLUORESCENCE; METHODOLOGY; RADIATION EXPOSURE; SYNCHROTRON; X RAY; X RAY CRYSTALLOGRAPHY;

ALGORITHMS; CRYSTALLOGRAPHY, X-RAY; ELECTRONS; FLUORESCENCE; PROTEINS; SYNCHROTRONS; X-RAYS;

EID: 63149142720     PISSN: 09074449     EISSN: 13990047     Source Type: Journal    
DOI: 10.1107/S090744490900540X     Document Type: Article

References (32)

1. Berger, M. J., Hubbell, J. H., Seltzer, S. M., Chang, J., Coursey, J. S., Sukumar, R. & Zucker, D. S. (1990). XCOM: Photon Cross Sections Database. http://physics.nist.gov/PhysRefData/Xcom/Text/XCOM.html.
2. Burmeister, W. P. (2000). Acta Cryst. D56, 328-341.
3. Borek, D., Ginell, S. L., Cymborowski, M., Minor, W. & Otwinowski, Z. (2007). J. Synchrotron Rad. 14, 24-33.
4. Chantler, C. T., Olsen, K., Dragoset, R. A., Chang, J., Kishore, A. R., Kotochigova, S. A. & Zucker, D. S. (2005). X-ray Form Factor, Attenuation and Scattering Tables. http://physics.nist.gov/PhysRefData/FFast/html/form. html.
5. Chinte, U., Shah, B., Chen, Y.-S., Pinkerton, A. A., Schall, C. A. & Hanson, B. L. (2007). Acta Cryst. D63, 486-492.
6. Clemons, W. M. Jr, Brodersen, D. E., McCutcheon, J. P., May, J. L., Carter, A. P., Morgan-Warren, R. J., Wimberly, B. T. & Ramakrishnan, V. (2001). J. Mol. Biol. 310, 827-843.
7. Cowan, J. A. & Nave, C. (2008). J. Synchrotron Rad. 15, 458-462.
8. Evans-Lutterodt, K., Ablett, J. M., Stein, A., Tennant, D. M., Klemens, F. & Taylor, A. (2004). Proc. SPIE, 5539, 73-79.
9. Evans-Lutterodt, K., Stein, A., Ablett, J. M., Kao, C. C., Tennant, D., Klemens, F., Taylor, A., Jacobsen, A. C., Gammel, P., Ustin, S., Bogart, G. & Ocola, L. (2003). Synchrotron. Radiat. News, 16, 60-63.
10. Garman, E. (2003). Curr. Opin. Struct. Biol. 13, 545-551.
11. Gonzalez, A. & Nave, C. (1994). Acta Cryst. D50, 874-877.
12. Hanson, B. L., Harp, J. M., Kirschbaum, K., Schall, C. A., DeWitt, K., Howard, A., Pinkerton, A. A. & Bunick, G. J. (2002). J. Synchrotron Rad. 9, 375-381.
13. Hedman, B., Hodgson, K. O., Helliwell, J. R., Liddington, R. & Papiz, M. Z. (1985). Proc. Natl Acad. Sci. USA, 82, 7604-7607.
14. Hope, H., Frolow, F., von Böhlen, K., Makowski, I., Kratky, C., Halfon, Y., Danz, H., Webster, P., Bartels, K. S., Wittmann, H. G. & Yonath, A. (1989). Acta Cryst. B45, 190-199.
15. Hovington, P., Drouin, D. & Gauvin, R. (1997). Scanning, 19, 1-14.
16. Kas, J. J., Sorini, A. P., Prange, M. P., Cambell, L. W., Soininen, J. A. & Rehr, J. J. (2007). Phys. Rev. B, 76, 195116.
17. McMaster, W. H., Kerr Del Grande, N., Mallett, J. H. & Hubbel, J. H. (1969). Periodic Table: X-ray Properties. http://www.csrri.iit.edu/ periodic-table.html.
18. Meents, A., Wagner, A., Schneider, R., Pradervand, C., Pohl, E. & Schulze-Briese, C. (2007). Acta Cryst. D63, 302-309.
19. Moukhametzianov, R., Burghammer, M., Edwards, P. C., Petitdemange, S., Popov, D., Fransen, M., McMullan, G., Schertler, G. F. X. & Riekel, C. (2008). Acta Cryst. D64, 158-166.
20. Nave, C. & Hill, M. A. (2005). J. Synchrotron Rad. 12, 299-303.
21. Ravelli, R. B. & Garman, E. F. (2006). Curr. Opin. Struct. Biol. 16, 624-629.
22. Rehr, J. J., Kas, J. J., Prange, M. P., Sorini, A. P., Campbell, L. W. & Vila, F. D. (2006). Proceedings of the X-Ray Absorption Fine Structure - XAFS13: 13th International Conference, edited by B. Hedman & P. Pianetta, pp. 85-88. Melville: American Institute of Physics.
23. Sanishvili, R., Nagarajan, V., Yoder, D., Becker, M., Xu, S., Corcoran, S., Akey, D. L., Smith, J. L. & Fischetti, R. F. (2008). Acta Cryst. D64, 425-435.
24. Schiltz, M., Dumas, P., Ennifar, E., Flensburg, C., Paciorek, W., Vonrhein, C. & Bricogne, G. (2004). Acta Cryst. D60, 1024-1031.
25. Shimizu, N., Hirata, K., Hasegawa, K., Ueno, G. & Yamamoto, M. (2007). J. Synchrotron Rad. 14, 4-10.
26. Sliz, P., Harrison, S. C. & Rosenbaum, G. (2003). Structure, 11, 13-19.
27. Sorini, A. P., Kas, J. J., Rehr, J. J., Prange, M. P. & Levine, Z. H. (2006). Phys. Rev. B, 74, 165111.
28. Stein, A., Jacobsen, C., Evans-Lutterodt, K., Tennant, D. M., Bogart, G., Klemens, F., Ocola, L. E., Choi, B. J. & Sreenivasan, S. V. (2003). J. Vac. Sci. Technol. B, 21, 214-219.
29. Teng, T.-Y. & Moffat, K. (2002). J. Synchrotron Rad. 9, 198-201.
30. Trzhaskovskaya, M. B., Nikulin, V. K., Nefedov, V. I. & Yarzhemsky, V. G. (2006). At. Data Nucl. Data Tables, 92, 245-304.
31. Watowich, S. J., Skehel, J. J. & Wiley, D. C. (1995). Acta Cryst. D51, 7-12.
32. Walsh, M. A., Evans, G., Sanishvili, R., Dementieva, I. & Joachimiak, A. (1999). Acta Cryst. D55, 1726-1732.