Discovery of regulatory elements in oomycete orthologs

Proceedings of the 2008 International Conference on Bioinformatics and Computational Biology, BIOCOMP 2008

Volumn , Issue , 2008, Pages 34-38

  Lichtenberg, Jens ^a   Morris, Paul ^b   Ecker, Klaus ^a   Welch, Lonnie ^a  

^a OHIO UNIVERSITY   (United States)

^b BOWLING GREEN STATE UNIVERSITY   (United States)

Author keywords

Bioinformatics; Module discovery; Motif discovery; Oomycete; Regulatory genomics

Indexed keywords

ABC TRANSPORTERS; BIOINFORMATICS METHODS; MODULE DISCOVERY; MOTIF DISCOVERY; OOMYCETE; ORTHOLOGS; PROMOTER SEQUENCES; REGULATORY ELEMENTS; REGULATORY GENOMICS; TRANSCRIPTION FACTOR BINDING SITES; TRANSCRIPTION FACTOR BINDINGS;

BINDING ENERGY; BINDING SITES; TRANSCRIPTION; TRANSCRIPTION FACTORS;

BIOINFORMATICS;

EID: 62649107278     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (5)

1. 1. Hollenstein, K., R. Dawson, and K. Locher, Structure and mechanism of ABC transporter proteins. Curr Opin Struct Biol, 2007. 17: p. 412-418.
2. 2. Lichtenberg, J., et al. Word-based Characterization of the Bidirectional Promoters from the Human DNA-repair Pathway. in BIOCOMP'08 - The 2008 International Conference on Bioinformatics & Computational Biology. 2008. Las Vegas.
3. 3. Lee, S.S., Seeking Significant Oligomers via Set Partitions Expected Count. International Journal of Computational Sciences, 2008. 4(2).
4. 4. McEwen, G.K., et al., Ancient duplicated conserved noncoding elements in vertebrates: A genomic and functional analysis. Genome Res, 2006. 16: p. 451-465.
5. 5. Xie, X., M. Kamal, and E.S. Lander, A family of conserved non-coding elements derived from an ancient transposable element. PNAS, 2006. 103: p. 11659-11664.