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Volumn 4, Issue 3-4, 2008, Pages 117-136

Identification of glycoproteins from mouse skin tumors and plasma

Author keywords

Biomarker; Cancer; Glycoprotein; MALDI TOF TOF; Mass spectrometry; MS MS; Plasma; Proteomics; Serum; Tumor

Indexed keywords

ALPHA1 INTEGRIN; ALPHA3 INTEGRIN; ALPHA6 INTEGRIN; BETA1 INTEGRIN; BETA2 INTEGRIN; CADHERIN; CADHERIN 22; CATHEPSIN; CATHEPSIN D; CD51 ANTIGEN; CELL ADHESION MOLECULE; EPIDERMAL GROWTH FACTOR RECEPTOR; EPITHELIAL MEMBRANE PROTEIN 1; FIBULIN 2; GLYCOPROTEIN; HERMES ANTIGEN; INTEGRIN; INTEGRIN ALPHA M; LYSOSOMAL MEMBRANE PROTEIN 2; MEMBRANE PROTEIN; MYELOPEROXIDASE; N ACETYLGALACTOSAMINE 4 SULFATASE; PROSTATE STEM CELL ANTIGEN; PROTOCADHERIN 22; TENASCIN; THROMBOSPONDIN; THROMBOSPONDIN 1; TUBERIN; TUMOR PROTEIN; UNCLASSIFIED DRUG; UNINDEXED DRUG;

EID: 62549145382     PISSN: 15426416     EISSN: None     Source Type: Journal    
DOI: 10.1007/s12014-008-9014-z     Document Type: Article
Times cited : (14)

References (31)
  • 1
    • 0037648348 scopus 로고    scopus 로고
    • The case for early detection
    • R Etzioni 2003 The case for early detection Nat Rev Cancer. 3 243 252
    • (2003) Nat Rev Cancer. , vol.3 , pp. 243-252
    • Etzioni, R.1
  • 2
    • 0037387175 scopus 로고    scopus 로고
    • Multi-component immunoaffinity subtraction chromatography: An innovative step towards a comprehensive survey of the human plasma proteome
    • R Pieper 2003 Multi-component immunoaffinity subtraction chromatography: an innovative step towards a comprehensive survey of the human plasma proteome Proteomics. 3 422 432
    • (2003) Proteomics. , vol.3 , pp. 422-432
    • Pieper, R.1
  • 3
    • 0003206867 scopus 로고    scopus 로고
    • Toward a human blood serum proteome: Analysis by multidimensional separation coupled with mass spectrometry
    • JN Adkins 2002 Toward a human blood serum proteome: analysis by multidimensional separation coupled with mass spectrometry Mol Cell Proteomics. 1 947 955
    • (2002) Mol Cell Proteomics. , vol.1 , pp. 947-955
    • Adkins, J.N.1
  • 4
    • 0346364695 scopus 로고    scopus 로고
    • Characterization of the low molecular weight human serum proteome
    • RS Tirumalai 2003 Characterization of the low molecular weight human serum proteome Mol Cell Proteomics. 2 1096 1103
    • (2003) Mol Cell Proteomics. , vol.2 , pp. 1096-1103
    • Tirumalai, R.S.1
  • 5
    • 1242316198 scopus 로고    scopus 로고
    • Ultra-high-efficiency strong cation exchange LC/RPLC/MS/MS for high dynamic range characterization of the human plasma proteome
    • Y Shen 2004 Ultra-high-efficiency strong cation exchange LC/RPLC/MS/MS for high dynamic range characterization of the human plasma proteome Anal Chem. 76 1134 1144
    • (2004) Anal Chem. , vol.76 , pp. 1134-1144
    • Shen, Y.1
  • 6
    • 11144334597 scopus 로고    scopus 로고
    • Analysis of mass spectrometry profiles of the serum proteome
    • KR Coombes 2005 Analysis of mass spectrometry profiles of the serum proteome Clin Chem. 51 1 2
    • (2005) Clin Chem. , vol.51 , pp. 1-2
    • Coombes, K.R.1
  • 7
    • 35448955641 scopus 로고    scopus 로고
    • Cancer biomarker discovery in plasma using a tissue-targeted proteomic approach
    • H Zhang DW Chan 2007 Cancer biomarker discovery in plasma using a tissue-targeted proteomic approach Cancer Epidemiol Biomarkers Prev. 16 1915 1917
    • (2007) Cancer Epidemiol Biomarkers Prev. , vol.16 , pp. 1915-1917
    • Zhang, H.1    Chan, D.W.2
  • 8
    • 0038699625 scopus 로고    scopus 로고
    • Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry
    • H Zhang XJ Li DB Martin R Aebersold 2003 Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry Nat Biotechnol. 21 660 666
    • (2003) Nat Biotechnol. , vol.21 , pp. 660-666
    • Zhang, H.1    Li, X.J.2    Martin, D.B.3    Aebersold, R.4
  • 10
    • 34547800600 scopus 로고    scopus 로고
    • Isolation of N-linked glycopeptides from plasma
    • Y Zhou R Aebersold H Zhang 2007 Isolation of N-linked glycopeptides from plasma Anal Chem. 79 5826 5837
    • (2007) Anal Chem. , vol.79 , pp. 5826-5837
    • Zhou, Y.1    Aebersold, R.2    Zhang, H.3
  • 11
    • 0036462601 scopus 로고    scopus 로고
    • Protein N-glycosylation along the secretory pathway: Relationship to organelle topography and function, protein quality control, and cell interactions
    • J Roth 2002 Protein N-glycosylation along the secretory pathway: relationship to organelle topography and function, protein quality control, and cell interactions Chem Rev. 102 285 303
    • (2002) Chem Rev. , vol.102 , pp. 285-303
    • Roth, J.1
  • 12
    • 20144383119 scopus 로고    scopus 로고
    • High throughput quantitative analysis of serum proteins using glycopeptide capture and liquid chromatography mass spectrometry
    • H Zhang 2005 High throughput quantitative analysis of serum proteins using glycopeptide capture and liquid chromatography mass spectrometry Mol Cell Proteomics. 4 144 155
    • (2005) Mol Cell Proteomics. , vol.4 , pp. 144-155
    • Zhang, H.1
  • 13
    • 33846548168 scopus 로고    scopus 로고
    • Mass spectrometric detection of tissue proteins in plasma
    • H Zhang 2007 Mass spectrometric detection of tissue proteins in plasma Mol Cell Proteomics. 6 64 71
    • (2007) Mol Cell Proteomics. , vol.6 , pp. 64-71
    • Zhang, H.1
  • 14
    • 34250866826 scopus 로고    scopus 로고
    • Clinical laboratory testing in human medicine based on the detection of glycoconjugates
    • BL Schulz W Laroy N Callewaert 2007 Clinical laboratory testing in human medicine based on the detection of glycoconjugates Curr Mol Med. 7 397 416
    • (2007) Curr Mol Med. , vol.7 , pp. 397-416
    • Schulz, B.L.1    Laroy, W.2    Callewaert, N.3
  • 15
    • 14944367554 scopus 로고    scopus 로고
    • High throughput proteome screening for biomarker detection
    • S Pan 2005 High throughput proteome screening for biomarker detection Mol Cell Proteomics. 4 182 190
    • (2005) Mol Cell Proteomics. , vol.4 , pp. 182-190
    • Pan, S.1
  • 16
    • 1042275609 scopus 로고    scopus 로고
    • Chemical probes and tandem mass spectrometry: A strategy for the quantitative analysis of proteomes and subproteomes
    • H Zhang W Yan R Aebersold 2004 Chemical probes and tandem mass spectrometry: a strategy for the quantitative analysis of proteomes and subproteomes Curr Opin Chem Biol. 8 66 75
    • (2004) Curr Opin Chem Biol. , vol.8 , pp. 66-75
    • Zhang, H.1    Yan, W.2    Aebersold, R.3
  • 17
    • 38349068918 scopus 로고    scopus 로고
    • Quantitative, multiplexed assays for low abundance proteins in plasma by targeted mass spectrometry and stable isotope dilution
    • H Keshishian T Addona M Burgess E Kuhn SA Carr 2007 Quantitative, multiplexed assays for low abundance proteins in plasma by targeted mass spectrometry and stable isotope dilution Mol Cell Proteomics. 6 2212 2229
    • (2007) Mol Cell Proteomics. , vol.6 , pp. 2212-2229
    • Keshishian, H.1    Addona, T.2    Burgess, M.3    Kuhn, E.4    Carr, S.A.5
  • 18
    • 35348863892 scopus 로고    scopus 로고
    • High sensitivity detection of plasma proteins by multiple reaction monitoring of N-glycosites
    • J Stahl-Zeng 2007 High sensitivity detection of plasma proteins by multiple reaction monitoring of N-glycosites Mol Cell Proteomics. 6 1809 1817
    • (2007) Mol Cell Proteomics. , vol.6 , pp. 1809-1817
    • Stahl-Zeng, J.1
  • 19
    • 33645721632 scopus 로고    scopus 로고
    • Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins
    • L Anderson CL Hunter 2006 Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins Mol Cell Proteomics. 5 573 588
    • (2006) Mol Cell Proteomics. , vol.5 , pp. 573-588
    • Anderson, L.1    Hunter, C.L.2
  • 20
    • 24944535307 scopus 로고    scopus 로고
    • Multistep skin cancer in mice as a model to study the evolution of cancer cells
    • CJ Kemp 2005 Multistep skin cancer in mice as a model to study the evolution of cancer cells Semin Cancer Biol. 15 460 473
    • (2005) Semin Cancer Biol. , vol.15 , pp. 460-473
    • Kemp, C.J.1
  • 21
    • 0000857494 scopus 로고
    • An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
    • J Eng AL McCormack JR Yates 3rd 1994 An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database J Am Soc Mass Spectrom. 5 976 989
    • (1994) J Am Soc Mass Spectrom. , vol.5 , pp. 976-989
    • Eng, J.1    McCormack, A.L.2    Yates III, J.R.3
  • 22
    • 0034789979 scopus 로고    scopus 로고
    • Quantitative profiling of differentiation-induced microsomal proteins using isotope-coded affinity tags and mass spectrometry
    • DK Han J Eng H Zhou R Aebersold 2001 Quantitative profiling of differentiation-induced microsomal proteins using isotope-coded affinity tags and mass spectrometry Nat Biotechnol. 19 946 951
    • (2001) Nat Biotechnol. , vol.19 , pp. 946-951
    • Han, D.K.1    Eng, J.2    Zhou, H.3    Aebersold, R.4
  • 23
    • 0037108887 scopus 로고    scopus 로고
    • Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search
    • A Keller AI Nesvizhskii E Kolker R Aebersold 2002 Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search Anal Chem. 74 5383 5392
    • (2002) Anal Chem. , vol.74 , pp. 5383-5392
    • Keller, A.1    Nesvizhskii, A.I.2    Kolker, E.3    Aebersold, R.4
  • 24
    • 35648931589 scopus 로고    scopus 로고
    • Integrated pipeline for mass spectrometry-based discovery and confirmation of biomarkers demonstrated in a mouse model of breast cancer
    • JR Whiteaker 2007 Integrated pipeline for mass spectrometry-based discovery and confirmation of biomarkers demonstrated in a mouse model of breast cancer J Proteome Res. 6 3962 3975
    • (2007) J Proteome Res. , vol.6 , pp. 3962-3975
    • Whiteaker, J.R.1
  • 25
    • 39449132134 scopus 로고    scopus 로고
    • Synthesis and evaluation of superparamagnetic silica particles for extraction of glycopeptides in the microtiter plate format
    • Z Zou 2008 Synthesis and evaluation of superparamagnetic silica particles for extraction of glycopeptides in the microtiter plate format Anal Chem. 80 1228 1234
    • (2008) Anal Chem. , vol.80 , pp. 1228-1234
    • Zou, Z.1
  • 26
    • 3242731195 scopus 로고    scopus 로고
    • A model for random sampling and estimation of relative protein abundance in shotgun proteomics
    • H Liu RG Sadygov JR Yates 3rd 2004 A model for random sampling and estimation of relative protein abundance in shotgun proteomics Anal Chem. 76 4193 4201
    • (2004) Anal Chem. , vol.76 , pp. 4193-4201
    • Liu, H.1    Sadygov, R.G.2    Yates III, J.R.3
  • 27
    • 0034117025 scopus 로고    scopus 로고
    • The tenascin family of ECM glycoproteins: Structure, function, and regulation during embryonic development and tissue remodeling
    • FS Jones PL Jones 2000 The tenascin family of ECM glycoproteins: structure, function, and regulation during embryonic development and tissue remodeling Dev Dyn. 218 235 259
    • (2000) Dev Dyn. , vol.218 , pp. 235-259
    • Jones, F.S.1    Jones, P.L.2
  • 28
    • 14644422666 scopus 로고    scopus 로고
    • Potential oncogenic action of tenascin-C in tumorigenesis
    • G Orend 2005 Potential oncogenic action of tenascin-C in tumorigenesis Int J Biochem Cell Biol. 37 1066 1083
    • (2005) Int J Biochem Cell Biol. , vol.37 , pp. 1066-1083
    • Orend, G.1
  • 29
    • 34447618279 scopus 로고    scopus 로고
    • Human sulfatases: A structural perspective to catalysis
    • D Ghosh 2007 Human sulfatases: a structural perspective to catalysis Cell Mol Life Sci. 64 2013 2022
    • (2007) Cell Mol Life Sci. , vol.64 , pp. 2013-2022
    • Ghosh, D.1
  • 30
    • 33750612210 scopus 로고    scopus 로고
    • Mass spectrometric identification of human prostate cancer-derived proteins in serum of xenograft-bearing mice
    • GJ van den Bemd 2006 Mass spectrometric identification of human prostate cancer-derived proteins in serum of xenograft-bearing mice Mol Cell Proteomics. 5 1830 1839
    • (2006) Mol Cell Proteomics. , vol.5 , pp. 1830-1839
    • Van Den Bemd, G.J.1
  • 31
    • 8844233567 scopus 로고    scopus 로고
    • Mass spectrometric quantitation of peptides and proteins using stable isotope standards and capture by anti-peptide antibodies (SISCAPA)
    • NL Anderson 2004 Mass spectrometric quantitation of peptides and proteins using stable isotope standards and capture by anti-peptide antibodies (SISCAPA) J Proteome Res. 3 235 244
    • (2004) J Proteome Res. , vol.3 , pp. 235-244
    • Anderson, N.L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.