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Volumn 4, Issue 2, 2005, Pages 182-190

High throughput proteome screening for biomarker detection

Author keywords

[No Author keywords available]

Indexed keywords

PROTEOME;

EID: 14944367554     PISSN: 15359476     EISSN: None     Source Type: Journal    
DOI: 10.1074/mcp.M400161-MCP200     Document Type: Article
Times cited : (130)

References (31)
  • 1
    • 1442329650 scopus 로고    scopus 로고
    • Identification of androgen-coregulated protein networks from the microsomes of human prostate cancer cells
    • Wright, M. E., Eng, J., Sherman, J., Hockenbery, D. M., Nelson, P. S., Galitski, T., and Aebersold, R. (2003) Identification of androgen-coregulated protein networks from the microsomes of human prostate cancer cells. Genome Biol. http://genomebiology.com/2003/5/1/R4
    • (2003) Genome Biol.
    • Wright, M.E.1    Eng, J.2    Sherman, J.3    Hockenbery, D.M.4    Nelson, P.S.5    Galitski, T.6    Aebersold, R.7
  • 2
    • 0037418318 scopus 로고    scopus 로고
    • Quantitative proteomic analysis indicates increased synthesis of a quinolone by Pseudomonas aeruginosa isolates from cystic fibrosis airways
    • Guina, T., Purvine, S. O., Yi, E. C., Eng, J., Goodlett, D. R., Aebersold, R., and Miller, S. I. (2003) Quantitative proteomic analysis indicates increased synthesis of a quinolone by Pseudomonas aeruginosa isolates from cystic fibrosis airways. Proc. Natl. Acad. Sci. U. S. A. 100, 2771-2776
    • (2003) Proc. Natl. Acad. Sci. U. S. A. , vol.100 , pp. 2771-2776
    • Guina, T.1    Purvine, S.O.2    Yi, E.C.3    Eng, J.4    Goodlett, D.R.5    Aebersold, R.6    Miller, S.I.7
  • 5
    • 4043141477 scopus 로고    scopus 로고
    • Quantitative cancer proteomics: Stable isotope labeling with amino acids in cell culture (SILAC) as a tool for prostate cancer research
    • Everley, P. A., Krijgsveld, J., Zetter, B. R., and Gygi, S. P. (2004) Quantitative cancer proteomics: stable isotope labeling with amino acids in cell culture (SILAC) as a tool for prostate cancer research. Mol. Cell. Proteomics 3, 729-735
    • (2004) Mol. Cell. Proteomics , vol.3 , pp. 729-735
    • Everley, P.A.1    Krijgsveld, J.2    Zetter, B.R.3    Gygi, S.P.4
  • 6
    • 3543023287 scopus 로고    scopus 로고
    • Direct proteomic mapping of the lung microvascular endothelial cell surface in vivo and in cell culture
    • Durr, E., Yu, J., Krasinska, K. M., Carver, L. A., Yates, J. R., Testa, J. E., Oh, P., and Schnitzer, J. E. (2004) Direct proteomic mapping of the lung microvascular endothelial cell surface in vivo and in cell culture. Nat. Biotechnol. 22, 985-992
    • (2004) Nat. Biotechnol. , vol.22 , pp. 985-992
    • Durr, E.1    Yu, J.2    Krasinska, K.M.3    Carver, L.A.4    Yates, J.R.5    Testa, J.E.6    Oh, P.7    Schnitzer, J.E.8
  • 8
    • 3042703022 scopus 로고    scopus 로고
    • Identification of TFB5, a new component of general transcription and DNA repair factor IIH
    • Ranish, J. A., Hahn, S., Lu, Y., Yi, E. C., Li, X. J., Eng, J., and Aebersold, R. (2004) Identification of TFB5, a new component of general transcription and DNA repair factor IIH. Nat. Genet. 36, 707-713
    • (2004) Nat. Genet. , vol.36 , pp. 707-713
    • Ranish, J.A.1    Hahn, S.2    Lu, Y.3    Yi, E.C.4    Li, X.J.5    Eng, J.6    Aebersold, R.7
  • 10
    • 0037337310 scopus 로고    scopus 로고
    • A proteomics strategy to elucidate functional protein-protein interactions applied to EGF signaling
    • Blagoev, B., Kratchmarova, I., Ong, S. E., Nielsen, M., Foster, L. J., and Mann, M. (2003) A proteomics strategy to elucidate functional protein-protein interactions applied to EGF signaling. Nat. Biotechnol. 21, 315-318
    • (2003) Nat. Biotechnol. , vol.21 , pp. 315-318
    • Blagoev, B.1    Kratchmarova, I.2    Ong, S.E.3    Nielsen, M.4    Foster, L.J.5    Mann, M.6
  • 11
    • 0034695924 scopus 로고    scopus 로고
    • The yeast nuclear pore complex: Composition, architecture, and transport mechanism
    • Rout, M. P., Aitchison, J. D., Suprapto, A., Hjertaas, K., Zhao, Y., and Chait, B. T. (2000) The yeast nuclear pore complex: composition, architecture, and transport mechanism. J. Cell Biol. 148, 635-651
    • (2000) J. Cell Biol. , vol.148 , pp. 635-651
    • Rout, M.P.1    Aitchison, J.D.2    Suprapto, A.3    Hjertaas, K.4    Zhao, Y.5    Chait, B.T.6
  • 12
    • 0346874342 scopus 로고    scopus 로고
    • Proteomic characterization of the human centrosome by protein correlation profiling
    • Andersen, J. S., Wilkinson, C. J., Mayor, T., Mortensen, P., Nigg, E. A., and Mann, M. (2003) Proteomic characterization of the human centrosome by protein correlation profiling. Nature 426, 570-574
    • (2003) Nature , vol.426 , pp. 570-574
    • Andersen, J.S.1    Wilkinson, C.J.2    Mayor, T.3    Mortensen, P.4    Nigg, E.A.5    Mann, M.6
  • 14
    • 0038662530 scopus 로고    scopus 로고
    • Proteomic applications for the early detection of cancer
    • Wulfkuhle, J. D., Liotta, L. A., and Petricoin, E. F. (2003) Proteomic applications for the early detection of cancer. Nat. Rev. Cancer 3, 267-275
    • (2003) Nat. Rev. Cancer , vol.3 , pp. 267-275
    • Wulfkuhle, J.D.1    Liotta, L.A.2    Petricoin, E.F.3
  • 15
    • 0037435030 scopus 로고    scopus 로고
    • Mass spectrometry-based proteomics
    • Aebersold, R., and Mann, M. (2003) Mass spectrometry-based proteomics. Nature 422, 198-207
    • (2003) Nature , vol.422 , pp. 198-207
    • Aebersold, R.1    Mann, M.2
  • 16
    • 0037370373 scopus 로고    scopus 로고
    • Proteomics: The first decade and beyond
    • Patterson, S. D., and Aebersold, R. H. (2003) Proteomics: the first decade and beyond. Nat. Genet. 33, (suppl.) 311-323
    • (2003) Nat. Genet. , vol.33 , Issue.SUPPL. , pp. 311-323
    • Patterson, S.D.1    Aebersold, R.H.2
  • 17
    • 0035241690 scopus 로고    scopus 로고
    • Mass spectrometry in proteomics
    • Aebersold, R., and Goodlett, D. R. (2001) Mass spectrometry in proteomics. Chem. Rev. 101, 269-295
    • (2001) Chem. Rev. , vol.101 , pp. 269-295
    • Aebersold, R.1    Goodlett, D.R.2
  • 18
    • 0037326081 scopus 로고    scopus 로고
    • Mass spectrometric-based approaches in quantitative proteomics
    • Ong, S. E., Foster, L. J., and Mann, M. (2003) Mass spectrometric-based approaches in quantitative proteomics. Methods 29, 124-130
    • (2003) Methods , vol.29 , pp. 124-130
    • Ong, S.E.1    Foster, L.J.2    Mann, M.3
  • 20
    • 0037307816 scopus 로고    scopus 로고
    • Advances in quantitative proteomics via stable isotope tagging and mass spectrometry
    • Tao, W. A., and Aebersold, R. (2003) Advances in quantitative proteomics via stable isotope tagging and mass spectrometry. Curr. Opin. Biotechnol. 14, 110-118
    • (2003) Curr. Opin. Biotechnol. , vol.14 , pp. 110-118
    • Tao, W.A.1    Aebersold, R.2
  • 21
    • 3242730298 scopus 로고    scopus 로고
    • Absolute quantification of specific proteins in complex mixtures using visible isotope-coded affinity tags
    • Lu, Y., Bottari, P., Turecek, F., Aebersold, R., and Gelb, M. H. (2004) Absolute quantification of specific proteins in complex mixtures using visible isotope-coded affinity tags. Anal. Chem. 76, 4104-4111
    • (2004) Anal. Chem. , vol.76 , pp. 4104-4111
    • Lu, Y.1    Bottari, P.2    Turecek, F.3    Aebersold, R.4    Gelb, M.H.5
  • 22
    • 0037795741 scopus 로고    scopus 로고
    • Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS
    • Gerber, S. A., Rush, J., Stemman, O., Kirschner, M. W., and Gygi, S. P. (2003) Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS. Proc. Natl. Acad. Sci. U. S. A. 100, 6940-6945
    • (2003) Proc. Natl. Acad. Sci. U. S. A. , vol.100 , pp. 6940-6945
    • Gerber, S.A.1    Rush, J.2    Stemman, O.3    Kirschner, M.W.4    Gygi, S.P.5
  • 23
    • 3042739098 scopus 로고    scopus 로고
    • A tool to visualize and evaluate data obtained by liquid chromatography-electrospray ionization-mass spectrometry
    • Li, X. J., Pedrioli, P. G., Eng, J., Martin, D., Yi, E. C., Lee, H., and Aebersold, R. (2004) A tool to visualize and evaluate data obtained by liquid chromatography-electrospray ionization-mass spectrometry. Anal. Chem. 76, 3856-3860
    • (2004) Anal. Chem. , vol.76 , pp. 3856-3860
    • Li, X.J.1    Pedrioli, P.G.2    Eng, J.3    Martin, D.4    Yi, E.C.5    Lee, H.6    Aebersold, R.7
  • 24
    • 0037434981 scopus 로고    scopus 로고
    • Disease proteomics
    • Hanash, S. (2003) Disease proteomics. Nature 422, 226-232
    • (2003) Nature , vol.422 , pp. 226-232
    • Hanash, S.1
  • 25
    • 3543061612 scopus 로고    scopus 로고
    • Integrated global profiling of cancer
    • Hanash, S. (2004) Integrated global profiling of cancer. Nat. Rev. Cancer 4, 638-644
    • (2004) Nat. Rev. Cancer , vol.4 , pp. 638-644
    • Hanash, S.1
  • 26
    • 6344221680 scopus 로고    scopus 로고
    • Implications of new proteomics strategies for biology and medicine
    • Domon, B., and Broder, S. (2004) Implications of new proteomics strategies for biology and medicine. J. Proteome Res. 3, 253-260
    • (2004) J. Proteome Res. , vol.3 , pp. 253-260
    • Domon, B.1    Broder, S.2
  • 27
    • 3142683671 scopus 로고    scopus 로고
    • A systems approach to discovering signaling and regulatory pathways - Or, how to digest large interaction networks into relevant pieces
    • Ideker, T. (2004) A systems approach to discovering signaling and regulatory pathways - or, how to digest large interaction networks into relevant pieces. Adv. Exp. Med. Biol. 547, 21-30
    • (2004) Adv. Exp. Med. Biol. , vol.547 , pp. 21-30
    • Ideker, T.1
  • 28
    • 0037434994 scopus 로고    scopus 로고
    • Constellations in a cellular universe
    • Aebersold, R. (2003) Constellations in a cellular universe. Nature 422, 115-116
    • (2003) Nature , vol.422 , pp. 115-116
    • Aebersold, R.1
  • 29
    • 0038699625 scopus 로고    scopus 로고
    • Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry
    • Zhang, H., Li, X. J., Martin, D. B., and Aebersold, R. (2003) Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry. Nat. Biotechnol. 21, 660-666
    • (2003) Nat. Biotechnol. , vol.21 , pp. 660-666
    • Zhang, H.1    Li, X.J.2    Martin, D.B.3    Aebersold, R.4
  • 30
    • 0000857494 scopus 로고
    • An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
    • Eng, J., McCormack, A. L., and Yates, J. R. (1994) An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database. J. Am. Soc. Mass. Spectrom. 5, 976-989
    • (1994) J. Am. Soc. Mass Spectrom. , vol.5 , pp. 976-989
    • Eng, J.1    McCormack, A.L.2    Yates, J.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.