메뉴 건너뛰기




Volumn 135, Issue 3-4, 2009, Pages 239-247

Sequencing and mutational analysis of the non-coding regions of influenza A virus

Author keywords

Influenza A virus; Mutational analysis; NCR; Sequencing

Indexed keywords

DNA DIRECTED DNA POLYMERASE ALPHA; GREEN FLUORESCENT PROTEIN; UNTRANSLATED RNA;

EID: 61849170644     PISSN: 03781135     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.vetmic.2008.09.067     Document Type: Article
Times cited : (27)

References (44)
  • 1
    • 0020490964 scopus 로고
    • Sequence of the N2 neuraminidase from influenza virus A/NT/60/68
    • Bentley D.R., and Brownlee G.G. Sequence of the N2 neuraminidase from influenza virus A/NT/60/68. Nucleic Acids Res. 10 (1982) 5033-5042
    • (1982) Nucleic Acids Res. , vol.10 , pp. 5033-5042
    • Bentley, D.R.1    Brownlee, G.G.2
  • 2
    • 36049034216 scopus 로고    scopus 로고
    • A single mutation in the PB1-F2 of H5N1 (HK/97) and 1918 influenza A viruses contributes to increased virulence
    • Conenello G.M., Zamarin D., Perrone L.A., Tumpey T., and Palese P. A single mutation in the PB1-F2 of H5N1 (HK/97) and 1918 influenza A viruses contributes to increased virulence. PLoS Pathog. 3 (2007) 1414-1421
    • (2007) PLoS Pathog. , vol.3 , pp. 1414-1421
    • Conenello, G.M.1    Zamarin, D.2    Perrone, L.A.3    Tumpey, T.4    Palese, P.5
  • 5
    • 0018848920 scopus 로고
    • The 3′ and 5′-terminal sequences of influenza A B and C virus RNA segments are highly conserved and show partial inverted complementarity
    • Desselberger U., Racaniello V.R., Zazra J.J., and Palese P. The 3′ and 5′-terminal sequences of influenza A B and C virus RNA segments are highly conserved and show partial inverted complementarity. Gene 8 (1980) 315-328
    • (1980) Gene , vol.8 , pp. 315-328
    • Desselberger, U.1    Racaniello, V.R.2    Zazra, J.J.3    Palese, P.4
  • 6
    • 0028245360 scopus 로고
    • The influenza virus panhandle is involved in the initiation of transcription
    • Fodor E., Pritlove D.C., and Brownlee G.G. The influenza virus panhandle is involved in the initiation of transcription. J. Virol. 68 (1994) 4092-4096
    • (1994) J. Virol. , vol.68 , pp. 4092-4096
    • Fodor, E.1    Pritlove, D.C.2    Brownlee, G.G.3
  • 7
    • 0029020773 scopus 로고
    • Characterization of the RNA-fork model of virion RNA in the initiation of transcription in influenza A virus
    • Fodor E., Pritlove D.C., and Brownlee G.G. Characterization of the RNA-fork model of virion RNA in the initiation of transcription in influenza A virus. J. Virol. 69 (1995) 4012-4019
    • (1995) J. Virol. , vol.69 , pp. 4012-4019
    • Fodor, E.1    Pritlove, D.C.2    Brownlee, G.G.3
  • 8
    • 0024212067 scopus 로고
    • Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer
    • Frohman M.A., Dush M.K., and Martin G.R. Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer. Proc. Natl. Acad. Sci. U.S.A. 85 (1988) 8998-9002
    • (1988) Proc. Natl. Acad. Sci. U.S.A. , vol.85 , pp. 8998-9002
    • Frohman, M.A.1    Dush, M.K.2    Martin, G.R.3
  • 9
    • 14744274632 scopus 로고    scopus 로고
    • Importance of both the coding and the segment-specific noncoding regions of the influenza A virus NS segment for its efficient incorporation into virions
    • Fujii K., Fujii Y., Noda T., Muramoto Y., Watanabe T., Takada A., Goto H., Horimoto T., and Kawaoka Y. Importance of both the coding and the segment-specific noncoding regions of the influenza A virus NS segment for its efficient incorporation into virions. J. Virol. 79 (2005) 3766-3774
    • (2005) J. Virol. , vol.79 , pp. 3766-3774
    • Fujii, K.1    Fujii, Y.2    Noda, T.3    Muramoto, Y.4    Watanabe, T.5    Takada, A.6    Goto, H.7    Horimoto, T.8    Kawaoka, Y.9
  • 10
    • 0028123774 scopus 로고
    • Recombinant influenza virus polymerase: requirement of both 5′ and 3′ viral ends for endonuclease activity
    • Hagen M., Chung T.D., Butcher J.A., and Krystal M. Recombinant influenza virus polymerase: requirement of both 5′ and 3′ viral ends for endonuclease activity. J. Virol. 68 (1994) 1509-1515
    • (1994) J. Virol. , vol.68 , pp. 1509-1515
    • Hagen, M.1    Chung, T.D.2    Butcher, J.A.3    Krystal, M.4
  • 11
    • 0035823083 scopus 로고    scopus 로고
    • Molecular basis for high virulence of Hong Kong H5N1 influenza A viruses
    • Hatta M., Gao P., Halfmann P., and Kawaoka Y. Molecular basis for high virulence of Hong Kong H5N1 influenza A viruses. Science 293 (2001) 1840-1842
    • (2001) Science , vol.293 , pp. 1840-1842
    • Hatta, M.1    Gao, P.2    Halfmann, P.3    Kawaoka, Y.4
  • 12
    • 0020027855 scopus 로고
    • Complete nucleotide sequence of the neuraminidase gene of human influenza virus A/WSN/33
    • Hiti A.L., and Nayak D.P. Complete nucleotide sequence of the neuraminidase gene of human influenza virus A/WSN/33. J. Virol. 41 (1982) 730-734
    • (1982) J. Virol. , vol.41 , pp. 730-734
    • Hiti, A.L.1    Nayak, D.P.2
  • 13
    • 0023445054 scopus 로고
    • Genomic RNAs of influenza viruses are held in a circular conformation in virions and in infected cells by a terminal panhandle
    • Hsu M.T., Parvin J.D., Gupta S., Krystal M., and Palese P. Genomic RNAs of influenza viruses are held in a circular conformation in virions and in infected cells by a terminal panhandle. Proc. Natl. Acad. Sci. U.S.A. 84 (1987) 8140-8144
    • (1987) Proc. Natl. Acad. Sci. U.S.A. , vol.84 , pp. 8140-8144
    • Hsu, M.T.1    Parvin, J.D.2    Gupta, S.3    Krystal, M.4    Palese, P.5
  • 15
    • 0021100725 scopus 로고
    • The sequence of RNA segment 1 of influenza virus A/NT/60/68 and its comparison with the corresponding segment of strains A/PR/8/34 and A/WSN/33
    • Jones K.L., Huddleston J.A., and Brownlee G.G. The sequence of RNA segment 1 of influenza virus A/NT/60/68 and its comparison with the corresponding segment of strains A/PR/8/34 and A/WSN/33. Nucleic Acids Res. 11 (1983) 1555-1566
    • (1983) Nucleic Acids Res. , vol.11 , pp. 1555-1566
    • Jones, K.L.1    Huddleston, J.A.2    Brownlee, G.G.3
  • 16
    • 0020067156 scopus 로고
    • Complete nucleotide sequence of the polymerase 3 gene of human influenza virus A/WSN/33
    • Kaptein J.S., and Nayak D.P. Complete nucleotide sequence of the polymerase 3 gene of human influenza virus A/WSN/33. J. Virol. 42 (1982) 55-63
    • (1982) J. Virol. , vol.42 , pp. 55-63
    • Kaptein, J.S.1    Nayak, D.P.2
  • 17
    • 0031029225 scopus 로고    scopus 로고
    • Mutational analysis of the RNA-fork model of the influenza A virus vRNA promoter in vivo
    • Kim H.J., Fodor E., Brownlee G.G., and Seong B.L. Mutational analysis of the RNA-fork model of the influenza A virus vRNA promoter in vivo. J. Gen. Virol. 78 (1997) 353-357
    • (1997) J. Gen. Virol. , vol.78 , pp. 353-357
    • Kim, H.J.1    Fodor, E.2    Brownlee, G.G.3    Seong, B.L.4
  • 18
    • 0031847157 scopus 로고    scopus 로고
    • The position 4 nucleotide at the 3′ end of the influenza virus neuraminidase vRNA is involved in temporal regulation of transcription and replication of neuraminidase RNAs and affects the repertoire of influenza virus surface antigens
    • Lee K.H., and Seong B.L. The position 4 nucleotide at the 3′ end of the influenza virus neuraminidase vRNA is involved in temporal regulation of transcription and replication of neuraminidase RNAs and affects the repertoire of influenza virus surface antigens. J. Gen. Virol. 79 (1998) 1923-1934
    • (1998) J. Gen. Virol. , vol.79 , pp. 1923-1934
    • Lee, K.H.1    Seong, B.L.2
  • 19
    • 0037443870 scopus 로고    scopus 로고
    • Activation of influenza virus RNA polymerase by the 5′ and 3′ terminal duplex of genomic RNA
    • Lee M.T., Klumpp K., Digard P., and Tiley L. Activation of influenza virus RNA polymerase by the 5′ and 3′ terminal duplex of genomic RNA. Nucleic Acids Res. 31 (2003) 1624-1632
    • (2003) Nucleic Acids Res. , vol.31 , pp. 1624-1632
    • Lee, M.T.1    Klumpp, K.2    Digard, P.3    Tiley, L.4
  • 20
    • 0027381917 scopus 로고
    • Mapping the 5′ and 3′ ends of Tetrahymena thermophila mRNAs using RNA ligase mediated amplification of cDNA ends (RLM-RACE)
    • Liu X., and Gorovsky M.A. Mapping the 5′ and 3′ ends of Tetrahymena thermophila mRNAs using RNA ligase mediated amplification of cDNA ends (RLM-RACE). Nucleic Acids Res. 21 (1993) 4954-4960
    • (1993) Nucleic Acids Res. , vol.21 , pp. 4954-4960
    • Liu, X.1    Gorovsky, M.A.2
  • 21
    • 0025914886 scopus 로고
    • Phylogenetic relationships of the non-structural (NS) genes of influenza A viruses
    • Ludwig S., Schultz U., Mandler J., Fitch W.M., and Scholtissek C. Phylogenetic relationships of the non-structural (NS) genes of influenza A viruses. Virology 183 (1991) 566-577
    • (1991) Virology , vol.183 , pp. 566-577
    • Ludwig, S.1    Schultz, U.2    Mandler, J.3    Fitch, W.M.4    Scholtissek, C.5
  • 22
    • 0024846089 scopus 로고
    • Amplification, expression, and packaging of foreign gene by influenza virus
    • Luytjes W., Krystal M., Enami M., Parvin J.D., and Palese P. Amplification, expression, and packaging of foreign gene by influenza virus. Cell 59 (1989) 1107-1113
    • (1989) Cell , vol.59 , pp. 1107-1113
    • Luytjes, W.1    Krystal, M.2    Enami, M.3    Parvin, J.D.4    Palese, P.5
  • 23
    • 27144465179 scopus 로고    scopus 로고
    • Cloning of the chicken RNA polymerase I promoter and use for reverse genetics of influenza A viruses in avian cells
    • Massin P., Rodrigues P., Marasescu M., van der Werf S., and Naffakh N. Cloning of the chicken RNA polymerase I promoter and use for reverse genetics of influenza A viruses in avian cells. J. Virol. 79 (2005) 13811-13816
    • (2005) J. Virol. , vol.79 , pp. 13811-13816
    • Massin, P.1    Rodrigues, P.2    Marasescu, M.3    van der Werf, S.4    Naffakh, N.5
  • 24
    • 0020609655 scopus 로고
    • Sequence of the hemagglutinin gene from influenza virus A/Seal/Mass/1/80
    • Naeve C.W., and Webster R.G. Sequence of the hemagglutinin gene from influenza virus A/Seal/Mass/1/80. Virology 129 (1983) 298-308
    • (1983) Virology , vol.129 , pp. 298-308
    • Naeve, C.W.1    Webster, R.G.2
  • 25
    • 33744942931 scopus 로고    scopus 로고
    • Host range restriction and pathogenicity in the context of influenza pandemic
    • Neumann G., and Kawaoka Y. Host range restriction and pathogenicity in the context of influenza pandemic. Emerg. Infect. Dis. 12 (2006) 881-886
    • (2006) Emerg. Infect. Dis. , vol.12 , pp. 881-886
    • Neumann, G.1    Kawaoka, Y.2
  • 26
    • 0027978143 scopus 로고
    • RNA polymerase I-mediated expression of influenza viral RNA molecules
    • Neumann G., Zobel A., and Hobom G. RNA polymerase I-mediated expression of influenza viral RNA molecules. Virology 202 (1994) 477-479
    • (1994) Virology , vol.202 , pp. 477-479
    • Neumann, G.1    Zobel, A.2    Hobom, G.3
  • 27
    • 40449116417 scopus 로고    scopus 로고
    • Heterologous influenza vRNA segments with identical non-coding sequences stimulate viral RNA replication in trans
    • Ng S.S., Li O.T., Cheung T.K., Peiris J.M., and Poon L.L. Heterologous influenza vRNA segments with identical non-coding sequences stimulate viral RNA replication in trans. Virol. J. 5 (2008) 2
    • (2008) Virol. J. , vol.5 , pp. 2
    • Ng, S.S.1    Li, O.T.2    Cheung, T.K.3    Peiris, J.M.4    Poon, L.L.5
  • 28
    • 0025044657 scopus 로고
    • Nucleotide sequence of the PA gene of influenza A/WSN/33(H1N1)
    • Odagiri T., and Tobita K. Nucleotide sequence of the PA gene of influenza A/WSN/33(H1N1). Nucleic Acids Res. 18 (1990) 654
    • (1990) Nucleic Acids Res. , vol.18 , pp. 654
    • Odagiri, T.1    Tobita, K.2
  • 29
    • 34447299235 scopus 로고    scopus 로고
    • Orthomyxoviridae: the viruses and their replication
    • Knipe D.M., and Howley P.M. (Eds), Lippincott Williams and Wilkins, Philadelphia, PA
    • Palese P., and Shaw M.L. Orthomyxoviridae: the viruses and their replication. In: Knipe D.M., and Howley P.M. (Eds). Fields Virology. 5th ed. (2007), Lippincott Williams and Wilkins, Philadelphia, PA 1647-1689
    • (2007) Fields Virology. 5th ed. , pp. 1647-1689
    • Palese, P.1    Shaw, M.L.2
  • 30
    • 35948937639 scopus 로고    scopus 로고
    • Age at infection affects the pathogenicity of Asian highly pathogenic avian influenza H5N1 viruses in ducks
    • Pantin-Jackwood M.J., Suarez D.L., Spackman E., and Swayne D.E. Age at infection affects the pathogenicity of Asian highly pathogenic avian influenza H5N1 viruses in ducks. Virus Res. 130 (2007) 151-161
    • (2007) Virus Res. , vol.130 , pp. 151-161
    • Pantin-Jackwood, M.J.1    Suarez, D.L.2    Spackman, E.3    Swayne, D.E.4
  • 31
    • 0025369455 scopus 로고
    • Hemagglutinin mutations related to attenuation and altered cell tropism of a virulent avian influenza A virus
    • Philpott M., Hioe C., Sheerar M., and Hinshaw V.S. Hemagglutinin mutations related to attenuation and altered cell tropism of a virulent avian influenza A virus. J. Virol. 64 (1990) 2941-2947
    • (1990) J. Virol. , vol.64 , pp. 2941-2947
    • Philpott, M.1    Hioe, C.2    Sheerar, M.3    Hinshaw, V.S.4
  • 32
    • 0018674114 scopus 로고
    • 5′ and 3′ terminal nucleotide sequences of the RNA genome segments of influenza virus
    • Robertson J.S. 5′ and 3′ terminal nucleotide sequences of the RNA genome segments of influenza virus. Nucleic Acids Res. 6 (1979) 3745-3757
    • (1979) Nucleic Acids Res. , vol.6 , pp. 3745-3757
    • Robertson, J.S.1
  • 33
    • 0036734038 scopus 로고    scopus 로고
    • Lethal H5N1 influenza viruses escape host anti-viral cytokine responses
    • Seo S.H., Hoffmann E., and Webster R.G. Lethal H5N1 influenza viruses escape host anti-viral cytokine responses. Nat. Med. 8 (2002) 950-954
    • (2002) Nat. Med. , vol.8 , pp. 950-954
    • Seo, S.H.1    Hoffmann, E.2    Webster, R.G.3
  • 34
    • 0019958063 scopus 로고
    • Sequence analysis of the polymerase 1 gene and the secondary structure prediction of polymerase 1 protein of human influenza virus A/WSN/33
    • Sivasubramanian N., and Nayak D.P. Sequence analysis of the polymerase 1 gene and the secondary structure prediction of polymerase 1 protein of human influenza virus A/WSN/33. J. Virol. 44 (1982) 321-329
    • (1982) J. Virol. , vol.44 , pp. 321-329
    • Sivasubramanian, N.1    Nayak, D.P.2
  • 35
    • 0017799135 scopus 로고
    • Nucleotide sequences at the 5′ termini of influenza virus RNAs and their transcripts
    • Skehel J.J., and Hay A.J. Nucleotide sequences at the 5′ termini of influenza virus RNAs and their transcripts. Nucleic Acids Res. 5 (1978) 1207-1219
    • (1978) Nucleic Acids Res. , vol.5 , pp. 1207-1219
    • Skehel, J.J.1    Hay, A.J.2
  • 37
    • 0344015773 scopus 로고    scopus 로고
    • Multiple alignment comparison of the non-structural genes of influenza A viruses
    • Suarez D.L., and Perdue M.L. Multiple alignment comparison of the non-structural genes of influenza A viruses. Virus Res. 54 (1998) 59-69
    • (1998) Virus Res. , vol.54 , pp. 59-69
    • Suarez, D.L.1    Perdue, M.L.2
  • 38
    • 0037210960 scopus 로고    scopus 로고
    • Rapid method for the characterization of 3′ and 5′ UTRs of influenza viruses
    • Szymkowiak C., Kwan W.S., Su Q., Toner T.J., Shaw A.R., and Youil R. Rapid method for the characterization of 3′ and 5′ UTRs of influenza viruses. J. Virol. Methods 107 (2003) 15-20
    • (2003) J. Virol. Methods , vol.107 , pp. 15-20
    • Szymkowiak, C.1    Kwan, W.S.2    Su, Q.3    Toner, T.J.4    Shaw, A.R.5    Youil, R.6
  • 39
    • 0034957221 scopus 로고    scopus 로고
    • The packaging signal of influenza viral RNA molecules
    • Tchatalbachev S., Flick R., and Hobom G. The packaging signal of influenza viral RNA molecules. RNA 7 (2001) 979-989
    • (2001) RNA , vol.7 , pp. 979-989
    • Tchatalbachev, S.1    Flick, R.2    Hobom, G.3
  • 40
    • 0019330373 scopus 로고
    • Antigenic drift between the haemagglutinin of the Hong Kong influenza strains A/Aichi/2/68 and A/Victoria/3/75
    • Verhoeyen M., Fang R., Jou W.M., Devos R., Huylebroeck D., Saman E., and Fiers W. Antigenic drift between the haemagglutinin of the Hong Kong influenza strains A/Aichi/2/68 and A/Victoria/3/75. Nature 286 (1980) 771-776
    • (1980) Nature , vol.286 , pp. 771-776
    • Verhoeyen, M.1    Fang, R.2    Jou, W.M.3    Devos, R.4    Huylebroeck, D.5    Saman, E.6    Fiers, W.7
  • 43
    • 38949185350 scopus 로고    scopus 로고
    • Interspecies and intraspecies transmission of triple reassortant H3N2 influenza A viruses
    • Yassine H.M., Al-Natour M.Q., Lee C.W., and Saif Y.M. Interspecies and intraspecies transmission of triple reassortant H3N2 influenza A viruses. Virol. J. 4 (2007) 129
    • (2007) Virol. J. , vol.4 , pp. 129
    • Yassine, H.M.1    Al-Natour, M.Q.2    Lee, C.W.3    Saif, Y.M.4
  • 44
    • 0029911606 scopus 로고    scopus 로고
    • Nonconserved nucleotides at the 3′ and 5′ ends of an influenza A virus RNA play an important role in viral RNA replication
    • Zheng H., Palese P., and Garcia-Sastre A. Nonconserved nucleotides at the 3′ and 5′ ends of an influenza A virus RNA play an important role in viral RNA replication. Virology 217 (1996) 242-251
    • (1996) Virology , vol.217 , pp. 242-251
    • Zheng, H.1    Palese, P.2    Garcia-Sastre, A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.