Sample size requirements to detect the effect of a group of genetic variants in case-control studies

Emerging Themes in Epidemiology

Volumn 5, Issue , 2008, Pages

  Moonesinghe, Ramal ^a   Yang, Quanhe ^b   Khoury, Muin J ^b  

^a CENTERS FOR DISEASE CONTROL AND PREVENTION   (United States)

^b NATIONAL CENTER ON BIRTH DEFECTS AND DEVELOPMENTAL DISABILITIES   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 61849164426     PISSN: None     EISSN: 17427622     Source Type: Journal    
DOI: 10.1186/1742-7622-5-24     Document Type: Review

References (21)

1. Realizing the promise of genomics in biomedical research. AE Guttmacher FS Collins, JAMA 2005 294 1399 1402 10.1001/jama.294.11.1399 16174701
2. The emergence of epidemiology in the genomics age. MJ Khoury R Millikan J Little M Gwinn, Int J Epidemiol 2004 33 936 44 10.1093/ije/dyh278 15319400
3. Genetic associations: false or true? JPA Ioannidis, Trends Mol Med 2003 9 135 8 10.1016/S1471-4914(03)00030-3 12727138
4. Genomic epidemiology of complex disease: the need for an electronic evidence-based approach to research synthesis. MB Bracken, Am J Epidemiol 2005 162 297 301 10.1093/aje/kwi200 16014778
5. Multifactor-Dimensionality reduction reveals high-order interactions among estrogen-metabolism genes in sporadic breast cancer. MD Ritchie LW Hahn N Roody LR Bailey WD Dupont FF Parl JH Moore, Am J Hum Genet 2001 69 138 47 11404819 10.1086/321276
6. Polymorphisms in coagulation factor genes and their impact on arterial and venous thrombosis. G Endler C Mannhalter, Clin Chim Acta 2003 330 31 55 10.1016/S0009-8981(03)00022-6 12636925
7. Gene-gene interaction in folate-related genes and risk of neural tube defects in a UK population. CL Relton CS Wilding MS Pearce AJ Laffling PA Jonas SA Lynch EJ Tawn J Burn, J Med Genet 2004 41 256 60 15060097 10.1136/jmg.2003.010694
8. Sample size determination in case-control studies: The influence of the distribution of exposure. GE McKeown-Eyssen DC Thomas, J Chron Dis 1985 38 559 68 10.1016/0021-9681(85)90044-X 4008598
9. Joint distribution of simultaneous exposures to several carcinogens in a case-control study: sample size determination. BR Rao, Commun Statist-Theor Meth 1986 15 3035 65 10.1080/03610928608829294
10. Introduction to sample size determination and power analysis of clinical trials. JM Lachin, Control Clin Trials 1981 2 93 113 10.1016/0197-2456(81)90001- 5 7273794
11. How many genes underlie the occurrence of common complex diseases in the population? Q Yang MJ Khoury JM Friedman J Little WD Flanders, Int J Epidemiol 2005 34 1129 37 10.1093/ije/dyi130 16043441
12. A simple sequentially rejective multiple procedure. S Holm, Scand J Statist 1979 6 65 70
13. A sharper Bonferroni procedure for multiple tests of significance. Y Hochberg, Biometrika 1988 75 800 02 10.1093/biomet/75.4.800
14. Controlling the False Discovery Rate: a Practical and Powerful Approach to Multiple Testing. Y Benjamin Y Hochberg, JRSS B 1995 57 289 300
15. Genetic Variation in the Nucleotide Excision Repair Pathway and Bladder Cancer Risk. M Garcia-Closas N Malats FX Real R Welch M Kogevinas N Chatterjee R Pfeiffer D Silverman M Dosemeci A Tardon C Serra A Carrato R Garcia-Closas G Castano-Vinyals S Chanock M Yeager N Rothman, Cancer Epidemiol Biomarkers Prev 2006 15 536 42 10.1158/1055-9965.EPI-05-0749 16537713
16. Resampling based multiple testing. PH Westfall SS Young, New York: John Wiley & Sons, Inc 1993
17. On the need for the rare disease assumption in case-control studies. S Greenland DC Thomas, Am J Epidemiol 1982 116 547 53 7124721
18. Designing case-control studies. T Yanagawa, Environ Health Perspect 1979 32 143 56 540588 10.2307/3429012
19. A balanced accuracy function for epistasis modeling in imbalanced datasets using multifactor dimensionality reduction. DR Velez BC White AA Motsinger WS Bush MD Ritchie MW Scott JH Moore, Genet Epidemiol 2007 31 306 15 10.1002/gepi.20211 17323372
20. Logic Regression. I Ruczinski C Kooperberg M LeBlanc, J Comp Graph Stats 2003 12 475 511 10.1198/1061860032238
21. Sample size determination for multiple continuous risk factors in case-control studies. K Lui, Biometrics 1993 49 873 76 10.2307/2532207