-
2
-
-
33748756171
-
Sedimentation in chemically reacting systems. II. Numerical calculations for dimerization
-
Belford G.G., and Belford R.L. Sedimentation in chemically reacting systems. II. Numerical calculations for dimerization. J. Chem Phys. 37 (1962) 1926-1932
-
(1962)
J. Chem Phys.
, vol.37
, pp. 1926-1932
-
-
Belford, G.G.1
Belford, R.L.2
-
4
-
-
34548101735
-
-
978-1-59593-697
-
Brookes E., and Demeler B. Parsimonious regularization using genetic algorithms applied to the analysis of analytical ultracentrifugation experiments. GECCO Proc. ACM (2007) 978-1-59593-697
-
(2007)
GECCO Proc. ACM
-
-
Brookes, E.1
Demeler, B.2
-
5
-
-
34347326250
-
Using prior knowledge in the determination of macromolecular size-distributions by analytical ultracentrifugation
-
Brown P., Balbo A., and Schuck P. Using prior knowledge in the determination of macromolecular size-distributions by analytical ultracentrifugation. Biomacromol. 8 (2007) 2011-2024
-
(2007)
Biomacromol.
, vol.8
, pp. 2011-2024
-
-
Brown, P.1
Balbo, A.2
Schuck, P.3
-
6
-
-
35548952674
-
Hydrodynamic modeling: The solution conformation of macromolecules and their complexes
-
Byron O. Hydrodynamic modeling: The solution conformation of macromolecules and their complexes. Methods Cell Biol. 84 (2008) 327-373
-
(2008)
Methods Cell Biol.
, vol.84
, pp. 327-373
-
-
Byron, O.1
-
8
-
-
0016243318
-
Theory of sedimentation for kinetically controlled dimerization reaction
-
Can J.R., and Kegele G. Theory of sedimentation for kinetically controlled dimerization reaction. Biochemistry 13 (1974) 1868-1874
-
(1974)
Biochemistry
, vol.13
, pp. 1868-1874
-
-
Can, J.R.1
Kegele, G.2
-
9
-
-
0017912735
-
Measurement of protein interactions mediated by small molecules using sedimentation velocity
-
Cann J.R. Measurement of protein interactions mediated by small molecules using sedimentation velocity. Methods Enzymol. 48 (1978) 242-248
-
(1978)
Methods Enzymol.
, vol.48
, pp. 242-248
-
-
Cann, J.R.1
-
10
-
-
0017917405
-
Ligand binding by associating sytems
-
Cann J.R. Ligand binding by associating sytems. Methods Enzymol. 48 (1978) 299-307
-
(1978)
Methods Enzymol.
, vol.48
, pp. 299-307
-
-
Cann, J.R.1
-
11
-
-
55549138004
-
Interferon regulatory factor activation revealed by the crystal structure of dimeric IRF-5
-
Chen W., Lam S.S., Srinath H., Jiang Z., Correia J.J., Schiffer C.A., Fitzgerald K.A., Lin K., and Royer Jr. W.E. Interferon regulatory factor activation revealed by the crystal structure of dimeric IRF-5. Nature Struct. & Mol. Biol. 15 (2008) 1213-1220
-
(2008)
Nature Struct. & Mol. Biol.
, vol.15
, pp. 1213-1220
-
-
Chen, W.1
Lam, S.S.2
Srinath, H.3
Jiang, Z.4
Correia, J.J.5
Schiffer, C.A.6
Fitzgerald, K.A.7
Lin, K.8
Royer Jr., W.E.9
-
12
-
-
0017179272
-
Sedimentation of generalized systems of interacting particles III. Concentration dependent sedimentation and extension to other transport methods
-
Claverie J.M. Sedimentation of generalized systems of interacting particles III. Concentration dependent sedimentation and extension to other transport methods. Biopolymers 15 (1976) 843-857
-
(1976)
Biopolymers
, vol.15
, pp. 843-857
-
-
Claverie, J.M.1
-
13
-
-
0016702458
-
Sedimentation of generalized systems of interacting particles. I. Solution of systems of complete Lamm equations
-
Claverie J.M., Dreux H., and Cohen R. Sedimentation of generalized systems of interacting particles. I. Solution of systems of complete Lamm equations. Biopolymers 14 (1975) 1685-1700
-
(1975)
Biopolymers
, vol.14
, pp. 1685-1700
-
-
Claverie, J.M.1
Dreux, H.2
Cohen, R.3
-
14
-
-
0033917806
-
The analysis of weight average sedimentation data
-
Correia J.J. The analysis of weight average sedimentation data. Methods in Enzymol. 321 (2000) 81-100
-
(2000)
Methods in Enzymol.
, vol.321
, pp. 81-100
-
-
Correia, J.J.1
-
15
-
-
0035814804
-
Sedimentation studies reveal a direct role of phosphorylation in Smad3:Smad4 homo- and hetero-trimerization
-
Correia J.J., Chacko B.M., Lam S.S., and Lin K. Sedimentation studies reveal a direct role of phosphorylation in Smad3:Smad4 homo- and hetero-trimerization. Biochemistry 40 (2001) 1473-1482
-
(2001)
Biochemistry
, vol.40
, pp. 1473-1482
-
-
Correia, J.J.1
Chacko, B.M.2
Lam, S.S.3
Lin, K.4
-
16
-
-
0028917410
-
Sedimentation studies on the kinesin head domain constructs K401, K366 and K341
-
Correia J.J., Gilbert S.P., Moyer M.L., and Johnson K.A. Sedimentation studies on the kinesin head domain constructs K401, K366 and K341. Biochemistry 34 (1995) 4898-4907
-
(1995)
Biochemistry
, vol.34
, pp. 4898-4907
-
-
Correia, J.J.1
Gilbert, S.P.2
Moyer, M.L.3
Johnson, K.A.4
-
18
-
-
0038365809
-
Calculation of simulated sedimentation velocity profiles for self-associating solutes
-
Cox D.J. Calculation of simulated sedimentation velocity profiles for self-associating solutes. Methods Enzymol. 48 (1978) 212-242
-
(1978)
Methods Enzymol.
, vol.48
, pp. 212-242
-
-
Cox, D.J.1
-
19
-
-
20444380585
-
Sedimentation velocity analysis of heterogeneous protein-protein interactions: Lamm equation modeling and sedimentation coefficient distributions c(s)
-
Dam J., Velikovsky C.A., Mariuzza R.A., Urbanke C., and Schuck P. Sedimentation velocity analysis of heterogeneous protein-protein interactions: Lamm equation modeling and sedimentation coefficient distributions c(s). Biophys. J. 89 (2005) 619-634
-
(2005)
Biophys. J.
, vol.89
, pp. 619-634
-
-
Dam, J.1
Velikovsky, C.A.2
Mariuzza, R.A.3
Urbanke, C.4
Schuck, P.5
-
20
-
-
0031982612
-
Determination of molecular parameters by fitting sedimentation data to finite-element solutions of the Lamm equation
-
Demeler B., and Saber H. Determination of molecular parameters by fitting sedimentation data to finite-element solutions of the Lamm equation. Biophys. J. 74 (1998) 444-454
-
(1998)
Biophys. J.
, vol.74
, pp. 444-454
-
-
Demeler, B.1
Saber, H.2
-
21
-
-
84984086797
-
Numerical solutions of the Lamm equation. I. Numerical procedure
-
Dishon M., Weiss G.H., and Yphantis D.A. Numerical solutions of the Lamm equation. I. Numerical procedure. Biopolymers 4 (1966) 449-456
-
(1966)
Biopolymers
, vol.4
, pp. 449-456
-
-
Dishon, M.1
Weiss, G.H.2
Yphantis, D.A.3
-
22
-
-
84984088128
-
Numerical solutions of the Lamm equation. III. Velocity centrifugation
-
Dishon M., Weiss G.H., and Yphantis D.A. Numerical solutions of the Lamm equation. III. Velocity centrifugation. Biopolymers 5 (1967) 697-713
-
(1967)
Biopolymers
, vol.5
, pp. 697-713
-
-
Dishon, M.1
Weiss, G.H.2
Yphantis, D.A.3
-
24
-
-
0142210107
-
Modern analytical ultracentrifugation in protein science: Look forward, not back
-
Eisenberg H. Modern analytical ultracentrifugation in protein science: Look forward, not back. Protein Sci. 11 (2002) 2647-2649
-
(2002)
Protein Sci.
, vol.11
, pp. 2647-2649
-
-
Eisenberg, H.1
-
25
-
-
2342525163
-
Mutational analysis of the energetics of the GrpE·DnaK binding interface: Equilibrium association constants by sedimentation velocity analytical ultracentrifugation
-
Gelinas A.D., Toth J., Bethoney K.A., Stafford W.F., and Harrison C.J. Mutational analysis of the energetics of the GrpE·DnaK binding interface: Equilibrium association constants by sedimentation velocity analytical ultracentrifugation. J. Mol. Biol. 339 (2004) 447-458
-
(2004)
J. Mol. Biol.
, vol.339
, pp. 447-458
-
-
Gelinas, A.D.1
Toth, J.2
Bethoney, K.A.3
Stafford, W.F.4
Harrison, C.J.5
-
27
-
-
0008128739
-
Sedimentation and electrophoresis of interacting substances. 1. Idealized boundary shape for a single substance aggregating reversibly
-
Gilbert G.A. Sedimentation and electrophoresis of interacting substances. 1. Idealized boundary shape for a single substance aggregating reversibly. Proc. Roy. Soc. (London) A250 (1959) 377-388
-
(1959)
Proc. Roy. Soc. (London)
, vol.A250
, pp. 377-388
-
-
Gilbert, G.A.1
-
28
-
-
36949071110
-
Concentration-dependent sedimentation of aggregating proteins in the ultracentrifuge
-
Gilbert G.A. Concentration-dependent sedimentation of aggregating proteins in the ultracentrifuge. Nature 186 (1960) 882-883
-
(1960)
Nature
, vol.186
, pp. 882-883
-
-
Gilbert, G.A.1
-
29
-
-
0000829337
-
Sedimentation and electrophoresis of interacting substances. II. Asymptotic boundary shape for two substances interacting reversibly
-
Ll
-
Gilbert G.A., and Jenkins R.C. Sedimentation and electrophoresis of interacting substances. II. Asymptotic boundary shape for two substances interacting reversibly. Proc. Royal Soc. London Ser. A 253 (1959) 420-437 Ll
-
(1959)
Proc. Royal Soc. London Ser. A
, vol.253
, pp. 420-437
-
-
Gilbert, G.A.1
Jenkins, R.C.2
-
30
-
-
0017919529
-
Molecular transport of reversibly reacting systems: Asymptotic boundary profiles in sedimentation, electrophoresis, and chromatography
-
Gilbert L.M., and Gilbert G.A. Molecular transport of reversibly reacting systems: Asymptotic boundary profiles in sedimentation, electrophoresis, and chromatography. Methods Enzymol. 48 (1978) 195-213
-
(1978)
Methods Enzymol.
, vol.48
, pp. 195-213
-
-
Gilbert, L.M.1
Gilbert, G.A.2
-
31
-
-
0019756004
-
Analysis of data from the analytical ultracentrifuge by nonlinear least-squares techniques
-
Johnson M.L., Correia J.J., Halvorson H., and Yphantis D.A. Analysis of data from the analytical ultracentrifuge by nonlinear least-squares techniques. Biophysical J. 36 (1981) 575-588
-
(1981)
Biophysical J.
, vol.36
, pp. 575-588
-
-
Johnson, M.L.1
Correia, J.J.2
Halvorson, H.3
Yphantis, D.A.4
-
32
-
-
0017912831
-
Pressure-jump light-scattering observations of macromolecular interaction kinetics
-
Kegeles G. Pressure-jump light-scattering observations of macromolecular interaction kinetics. Methods Enzymol. 48 (1978) 308-320
-
(1978)
Methods Enzymol.
, vol.48
, pp. 308-320
-
-
Kegeles, G.1
-
33
-
-
0017912462
-
Kinetically controlled mass transport of associating-dossociating macromolecules
-
Kegeles G., and Cann J. Kinetically controlled mass transport of associating-dossociating macromolecules. Methods Enzymol. 48 (1978) 248-270
-
(1978)
Methods Enzymol.
, vol.48
, pp. 248-270
-
-
Kegeles, G.1
Cann, J.2
-
34
-
-
0014104791
-
Sedimentation behavior of chemically reacting systems
-
Kegeles G., Rhodes L., and Bethune J.L. Sedimentation behavior of chemically reacting systems. PNAS 58 (1967) 45-51
-
(1967)
PNAS
, vol.58
, pp. 45-51
-
-
Kegeles, G.1
Rhodes, L.2
Bethune, J.L.3
-
35
-
-
0002498995
-
Computer-aided interpretation of analytical sedimentation data for proteins
-
Harding S.E., et al. (Ed), Royal Society of Chemistry, Cambridge, UK
-
Laue T.M., Shah B.D., Ridgeway T.M., and Pelletier S.L. Computer-aided interpretation of analytical sedimentation data for proteins. In: Harding S.E., et al. (Ed). Analytical ultracentrifugation in biochemistry and polymer science (1992), Royal Society of Chemistry, Cambridge, UK 90-125
-
(1992)
Analytical ultracentrifugation in biochemistry and polymer science
, pp. 90-125
-
-
Laue, T.M.1
Shah, B.D.2
Ridgeway, T.M.3
Pelletier, S.L.4
-
36
-
-
0000238336
-
A simplex method for function minimization
-
Nelder J.A., and Mead R. A simplex method for function minimization. Comput. J. 7 (1965) 308-313
-
(1965)
Comput. J.
, vol.7
, pp. 308-313
-
-
Nelder, J.A.1
Mead, R.2
-
37
-
-
33748754518
-
Countercurrent distibutions of chemically reacting systems: IV. Kinectically controlled dimerization in a boundary
-
Oberhauser D.F., Bethune J.L., and Kegeles G. Countercurrent distibutions of chemically reacting systems: IV. Kinectically controlled dimerization in a boundary. Biochemistry 4 (1965) 1878-1884
-
(1965)
Biochemistry
, vol.4
, pp. 1878-1884
-
-
Oberhauser, D.F.1
Bethune, J.L.2
Kegeles, G.3
-
38
-
-
0028871804
-
How to measure and predict the molar absorption coefficient of a protein
-
Pace C.N., Vajdos F., Fee L., Grimsley G., and Gray T. How to measure and predict the molar absorption coefficient of a protein. Prot. Sci 4 (1995) 2411-2423
-
(1995)
Prot. Sci
, vol.4
, pp. 2411-2423
-
-
Pace, C.N.1
Vajdos, F.2
Fee, L.3
Grimsley, G.4
Gray, T.5
-
39
-
-
0034654352
-
A method for directly fitting the time derivative of sedimentation velocity data and an alternative algorithm for calculating sedimentation coefficient distribution functions
-
Philo J.S. A method for directly fitting the time derivative of sedimentation velocity data and an alternative algorithm for calculating sedimentation coefficient distribution functions. Anal. Biochem. 279 (2000) 151-163
-
(2000)
Anal. Biochem.
, vol.279
, pp. 151-163
-
-
Philo, J.S.1
-
40
-
-
33745216899
-
Improved methods for fitting sedimentation coefficient distributions derived by time-derivative techniques
-
Philo J.S. Improved methods for fitting sedimentation coefficient distributions derived by time-derivative techniques. Anal. Biochem. 354 (2006) 238-246
-
(2006)
Anal. Biochem.
, vol.354
, pp. 238-246
-
-
Philo, J.S.1
-
41
-
-
0014667364
-
Studies of self-associating systems by equilibrium ultracentrifugation
-
Roark D.E., and Yphantis D.A. Studies of self-associating systems by equilibrium ultracentrifugation. Ann. N.Y. Acad. Sci. 164 (1969) 245-278
-
(1969)
Ann. N.Y. Acad. Sci.
, vol.164
, pp. 245-278
-
-
Roark, D.E.1
Yphantis, D.A.2
-
42
-
-
0031688168
-
Sedimentation analysis of noninteracting and self-associating solutes using numerical solutions to the Lamm equation
-
Schuck P. Sedimentation analysis of noninteracting and self-associating solutes using numerical solutions to the Lamm equation. Biophys. J. 75 (1998) 1503-1512
-
(1998)
Biophys. J.
, vol.75
, pp. 1503-1512
-
-
Schuck, P.1
-
43
-
-
0033058274
-
Direct sedimentation analysis of interference optical data in analytical ultracentrifugation
-
Schuck P., and Demeler B. Direct sedimentation analysis of interference optical data in analytical ultracentrifugation. Biophys. J. 76 (1999) 2288-2296
-
(1999)
Biophys. J.
, vol.76
, pp. 2288-2296
-
-
Schuck, P.1
Demeler, B.2
-
44
-
-
1942521723
-
Interaction of the trp RNA-binding attenuation protein (TRAP) with anti-TRAP
-
-662
-
Snyder D., Lary J., Chen Y., Gollnick P., and Cole J.L. Interaction of the trp RNA-binding attenuation protein (TRAP) with anti-TRAP. J. Mol. Biol. 338 (2004) 669 -662
-
(2004)
J. Mol. Biol.
, vol.338
, pp. 669
-
-
Snyder, D.1
Lary, J.2
Chen, Y.3
Gollnick, P.4
Cole, J.L.5
-
45
-
-
1642298085
-
A comparison of weight average and direct boundary fitting of sedimentation velocity data for indefinite polymerizing systems
-
Sontag C.A., Stafford W.F., and Correia J.J. A comparison of weight average and direct boundary fitting of sedimentation velocity data for indefinite polymerizing systems. Biophys. Chem. 108 (2004) 215-230
-
(2004)
Biophys. Chem.
, vol.108
, pp. 215-230
-
-
Sontag, C.A.1
Stafford, W.F.2
Correia, J.J.3
-
46
-
-
78651158388
-
Physical studies of muramidase (lysozyme) II. pH-dependent dimerization
-
Sophianopoulos A.J., and van Holde K.E. Physical studies of muramidase (lysozyme) II. pH-dependent dimerization. J. Biol. Chem. 239 (1964) 2516-2524
-
(1964)
J. Biol. Chem.
, vol.239
, pp. 2516-2524
-
-
Sophianopoulos, A.J.1
van Holde, K.E.2
-
47
-
-
0018917327
-
Graphical analysis of nonideal monomer, N-mer, isodesmic, and type II indefinite self-associating systems by equilibrium ultracentrifugation
-
Stafford W.F. Graphical analysis of nonideal monomer, N-mer, isodesmic, and type II indefinite self-associating systems by equilibrium ultracentrifugation. Biophys. J. 29 (1980) 149-166
-
(1980)
Biophys. J.
, vol.29
, pp. 149-166
-
-
Stafford, W.F.1
-
48
-
-
0026747656
-
Boundary analysis in sedimentation transport experiments: A procedure for obtaining sedimentation coefficient distributions using the time derivative of the concentration profile
-
Stafford W.F. Boundary analysis in sedimentation transport experiments: A procedure for obtaining sedimentation coefficient distributions using the time derivative of the concentration profile. Anal. Biochem. 203 (1992) 295-301
-
(1992)
Anal. Biochem.
, vol.203
, pp. 295-301
-
-
Stafford, W.F.1
-
49
-
-
0002852793
-
Time difference sedimentation velocity analysis of rapidly reversible interacting systems: Determination of equilibrium constants by non-linear curve fitting procedures
-
Stafford W.F. Time difference sedimentation velocity analysis of rapidly reversible interacting systems: Determination of equilibrium constants by non-linear curve fitting procedures. Biophys. J. 74 (1998) A301
-
(1998)
Biophys. J.
, vol.74
-
-
Stafford, W.F.1
-
50
-
-
0034581366
-
Analysis of reversibly interacting macromolecular systems by time derivative sedimentation velocity
-
Stafford W.F. Analysis of reversibly interacting macromolecular systems by time derivative sedimentation velocity. Methods Enzymol. 323 (2000) 302-325
-
(2000)
Methods Enzymol.
, vol.323
, pp. 302-325
-
-
Stafford, W.F.1
-
51
-
-
62649089303
-
Protein-protein and ligand-protein interactions studied by analytical ultracentrifugation
-
Schriver J.W. (Ed), Humana Press, New York
-
Stafford W.F. Protein-protein and ligand-protein interactions studied by analytical ultracentrifugation. In: Schriver J.W. (Ed). Protein structure, stability, and interactions vol. 490 (2009), Humana Press, New York 83-113
-
(2009)
Protein structure, stability, and interactions
, vol.490
, pp. 83-113
-
-
Stafford, W.F.1
-
52
-
-
1642368109
-
Analysis of heterologous interacting systems by sedimentation velocity: Curve fitting algorithms for estimation of sedimentation coefficients, equilibrium and kinetic constants
-
Stafford W.F., and Sherwood P.J. Analysis of heterologous interacting systems by sedimentation velocity: Curve fitting algorithms for estimation of sedimentation coefficients, equilibrium and kinetic constants. Biophys. Chem. 108 (2004) 231-243
-
(2004)
Biophys. Chem.
, vol.108
, pp. 231-243
-
-
Stafford, W.F.1
Sherwood, P.J.2
-
53
-
-
0001632752
-
The application of the oil turbine type of ultracentrifuge to the study of the stability region of CO-hemoglobin
-
Svedberg T., and Nichols J.B. The application of the oil turbine type of ultracentrifuge to the study of the stability region of CO-hemoglobin. J. Am. Chem. Soc. 49 (1927) 2920-2934
-
(1927)
J. Am. Chem. Soc.
, vol.49
, pp. 2920-2934
-
-
Svedberg, T.1
Nichols, J.B.2
-
54
-
-
0008566463
-
General solution to the inverse problem of the differential equation of the ultracentrifuge
-
Todd G.P., and Haschemeyer R.H. General solution to the inverse problem of the differential equation of the ultracentrifuge. PNAS 78 (1981) 6739-6743
-
(1981)
PNAS
, vol.78
, pp. 6739-6743
-
-
Todd, G.P.1
Haschemeyer, R.H.2
-
55
-
-
0001577821
-
Sedimentation in chemically reacting systems. I. The isomerization reaction
-
van Holde K.E. Sedimentation in chemically reacting systems. I. The isomerization reaction. J. Chem. Phys. 37 (1962) 1922-1926
-
(1962)
J. Chem. Phys.
, vol.37
, pp. 1922-1926
-
-
van Holde, K.E.1
-
56
-
-
1642330626
-
Sedimentation equilibrium and the foundations of protein chemistry
-
van Holde K.E. Sedimentation equilibrium and the foundations of protein chemistry. Biophys. Chem. 108 (2004) 5-8
-
(2004)
Biophys. Chem.
, vol.108
, pp. 5-8
-
-
van Holde, K.E.1
-
57
-
-
1642385074
-
Characterization of macromolecular heterogeneity by equilibrium sedimentation techniques
-
Xu Y. Characterization of macromolecular heterogeneity by equilibrium sedimentation techniques. Biophys. Chem. 108 (2004) 141-163
-
(2004)
Biophys. Chem.
, vol.108
, pp. 141-163
-
-
Xu, Y.1
-
58
-
-
0015386141
-
Equilibrium centrifugation of nonideal systems. Molecular weight moments for removing the effects of nonideality
-
Yphantis D.A., and Roark D.E. Equilibrium centrifugation of nonideal systems. Molecular weight moments for removing the effects of nonideality. Biochemistry 11 (1972) 2925-2934
-
(1972)
Biochemistry
, vol.11
, pp. 2925-2934
-
-
Yphantis, D.A.1
Roark, D.E.2
-
59
-
-
84912372841
-
Detection of Heterogeneity in Self Associating Systems
-
Catsimpoolas N. (Ed), Elsevier, New York
-
Yphantis D.A., Correia J.J., Johnson M.L., and Wu G.M. Detection of Heterogeneity in Self Associating Systems. In: Catsimpoolas N. (Ed). Physical Aspects of Protein Interactions (1978), Elsevier, New York 275-303
-
(1978)
Physical Aspects of Protein Interactions
, pp. 275-303
-
-
Yphantis, D.A.1
Correia, J.J.2
Johnson, M.L.3
Wu, G.M.4
-
60
-
-
44649131886
-
Kinetic partitioning between alternative protein-protein interactions controls a transcriptional switch
-
Zhao H., and Beckett D. Kinetic partitioning between alternative protein-protein interactions controls a transcriptional switch. J. Mol. Biol. 380 (2008) 223-236
-
(2008)
J. Mol. Biol.
, vol.380
, pp. 223-236
-
-
Zhao, H.1
Beckett, D.2
|