Molecular characterization of an Indian isolate of Banana bunchy top virus based on six genomic DNA components

Virus Genes

Volumn 38, Issue 2, 2009, Pages 334-344

  Vishnoi, Radha ^a   Raj, Shri Krishna ^a   Prasad, Vivek ^b  

^a CSIR NATIONAL BOTANICAL RESEARCH INSTITUTE   (India)

^b UNIVERSITY OF LUCKNOW   (India)

Author keywords

Babuvirus; Banana bunchy top virus; Indian isolates; Nanovirus; Phylogenetic analysis; Sequence identities; Six DNA components; South Pacific group

Indexed keywords

CIRCULAR DNA; GENOMIC DNA;

AMPLICON; ARTICLE; BABUVIRUS; BANANA; GENE AMPLIFICATION; MOLECULAR CLONING; MOLECULAR GENETICS; NANOVIRIDAE; NONHUMAN; NUCLEOTIDE SEQUENCE; PACIFIC ISLANDS; PHYLOGENY; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; UNINDEXED SEQUENCE; VIRUS ISOLATION;

AMINO ACID SEQUENCE; BABUVIRUS; BASE SEQUENCE; CLUSTER ANALYSIS; DNA PRIMERS; DNA, VIRAL; INDIA; MOLECULAR SEQUENCE DATA; MUSA; PHYLOGENY; PLANT DISEASES; POLYMERASE CHAIN REACTION; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY;

BABUVIRUS; BANANA BUNCHY TOP VIRUS; DNA VIRUSES; NANOVIRIDAE; NANOVIRUS;

EID: 61849083044     PISSN: 09208569     EISSN: 1572994X     Source Type: Journal    
DOI: 10.1007/s11262-009-0331-8     Document Type: Article

References (31)

1. JL Dale 1987 Adv. Virus Res. 33 301 325 10.1016/S0065-3527(08)60321-8
2. C.W. Wardlaw, Banana Diseases, Including Plantains and Abaca (William Clowes and Sons Ltd. London, Beccles and Colchester, 1972), pp. 68-115
3. RM Harding TM Burns JL Dale 1991 J. Gen. Virol. 72 225 230 10.1099/0022-1317-72-2-225
4. JE Thomas RG Dietzgen 1991 J. Gen. Virol. 72 217 224 10.1099/0022-1317- 72-2-217
5. RY Wu HJ Su 1990 J. Phytopathol. 128 153 160 10.1111/j.1439-0434.1990. tb04261.x
6. H.J. Vetten, P.W. Chu, J.L. Dale, R.M. Harding, J. Hu, L. Katul, M. Kojima, J.W. Randles, Y. Sano, J.E. Thomas, in Virus Taxonomy: Eighth Report of the International Committee on Taxonomy of Viruses, ed. by C.M. Fauquet, M.A. Mayo, J. Maniloff, U. Desselberger, L.A. Ball (Academic Press, San Diego, London, 2005), pp. 343-352
7. TM Burns RM Harding JL Dale 1995 J. Gen. Virol. 76 1471 1480 10.1099/0022-1317-76-6-1471
8. RP Beetham GJ Hafner RM Harding JL Dale 1997 J. Gen. Virol. 78 229 236
9. M Karan RM Harding JL Dale 1994 J. Gen. Virol. 75 3541 3546 10.1099/0022-1317-75-12-3541
10. M. Karan, R.M. Harding, J.L. Dale, Molecular Plant Pathology on-line (1997), http://www.bspp.org.uk/mppol/1997/0624karan. Accessed 30 Jan 2009
11. TE Zhuang Jun L Zhi-Xin Chin 2005 J. Agric. Biotechnol. 2 91 97 10.1079/CJB200566
12. N Furuya TO Dizon KT Natsuaki 2005 J. Gen. Plant Pathol. 71 68 73 10.1007/s10327-004-0162-3
13. N Furuya TO Dizon KT Natsuaki 2006 J. Agric. Sci. 51 92 101
14. I Amin J Qazi S Mansoor M Ilyas RW Briddon 2008 Virus Genes 36 191 198 10.1007/s11262-007-0168-y
15. M Sharman JE Thomas S Skabo TA Holton 2008 Arch. Virol. 153 135 147 10.1007/s00705-007-1077-z
16. F.A.O.S.T.A.T. Anonymous, ProdSTAT: Crops. UN Food and Agriculture Organisation (2008), p. 567, ( http://faostat.fao.org/site/567/DesktopDefault. aspx?PageID=567 ). Accessed 19 Feb 2007
17. SL Dellaporta J Woods TB Hicks 1983 Plant Mol. Biol. Rep. 1 19 21 10.1007/BF02712670
18. RM Harding GJ Hafner RG Dietzgen JL Dale 1993 J. Gen. Virol. 74 323 328 10.1099/0022-1317-74-3-323
19. SF Altschul TL Madden AA Schaffer J Zhang W Miller DJ Lipman 1997 Nucleic Acids Res. 25 3389 3402 10.1093/nar/25.17.3389
20. B Morgenstern K Frech A Dress T Werner 1998 Bioinformatics 14 290 294 10.1093/bioinformatics/14.3.290
21. S. Kumar, K. Tamura, I.B. Jakobsen, M. Nei, MEGA2: Molecular Evolutionary Genetics Analysis Software (Arizona State University, Arizona, USA, 2001)
22. VA Herrera-Valencia B Dugdale RM Harding JL Dale 2006 J. Gen. Virol. 87 3409 3412 10.1099/vir.0.82166-0
23. TM Burns RM Harding JL Dale 1994 Arch. Virol. 137 371 380 10.1007/BF01309482
24. AE Gorbalenya EV Koonin Y Wolf 1990 FEBS Lett. 262 145 148 10.1016/0014-5793(90)80175-I
25. PR Beetham RM Harding JL Dale 1999 Arch. Virol. 144 89 105 10.1007/s007050050487
26. GN Revington G Sunter DM Bisaro 1987 Plant Cell 1 985 992
27. K Saunders A Lucy J Stanley 1991 Nucleic Acids Res. 19 2325 2330 10.1093/nar/19.9.2325
28. F Heyraud V Matzeit M Kammann S Schaefer J Schell B Gronenborn 1993 EMBO J. 12 4445 4452
29. T Timchenko F Kouchkovsky L Katul C David HJ Vetten B Gronenborn 1999 J. Virol. 73 10173 10182
30. J-M Hu H-C Fu C-H Lin H-J Su H-H Yeh 2007 J. Virol. 81 1746 1761 10.1128/JVI.01390-06
31. K Manickam S Doraiswamy T Ganapathy G Thiribhuvana R Rabindran Z Pflanzenkr 2001 Pflanzenschutz 108 490 499