메뉴 건너뛰기




Volumn 4, Issue , 2009, Pages

CHSMiner: A GUI tool to identify chromosomal homologous segments

Author keywords

[No Author keywords available]

Indexed keywords


EID: 61649102674     PISSN: None     EISSN: 17487188     Source Type: Journal    
DOI: 10.1186/1748-7188-4-2     Document Type: Article
Times cited : (11)

References (15)
  • 2
    • 5044230820 scopus 로고    scopus 로고
    • Computational approaches to unveiling ancient genome duplications
    • 10.1038/nrg1449 15510166
    • Peer Van de Y Computational approaches to unveiling ancient genome duplications. Nat Rev Genet 2004, 5:752-763. 10.1038/nrg1449 15510166
    • (2004) Nat Rev Genet , vol.5 , pp. 752-763
    • Van de Peer, Y.1
  • 3
    • 8844271705 scopus 로고    scopus 로고
    • Recent developments in computational approaches for uncovering genomic homology
    • 10.1002/bies.20127 15499578
    • Simillion C Vandepoele K Peer Van de Y Recent developments in computational approaches for uncovering genomic homology. Bioessays 2004, 26:1225-1235. 10.1002/bies.20127 15499578
    • (2004) Bioessays , vol.26 , pp. 1225-1235
    • Simillion, C.1    Vandepoele, K.2    Van De Peer, Y.3
  • 4
    • 0036852286 scopus 로고    scopus 로고
    • The automatic detection of homologous regions (ADHoRe) and its application to microcolinearity between Arabidopsis and rice
    • 187543 12421767 10.1101/gr.400202
    • Vandepoele K Saeys Y Simillion C Raes J Peer Van De Y The automatic detection of homologous regions (ADHoRe) and its application to microcolinearity between Arabidopsis and rice. Genome Res 2002, 12:1792-1801. 187543 12421767 10.1101/gr.400202
    • (2002) Genome Res , vol.12 , pp. 1792-1801
    • Vandepoele, K.1    Saeys, Y.2    Simillion, C.3    Raes, J.4    Van de Peer, Y.5
  • 5
    • 1042276327 scopus 로고    scopus 로고
    • Fast identification and statistical evaluation of segmental homologies in comparative maps
    • 10.1093/bioinformatics/btg1008 12855440
    • Calabrese PP Chakravarty S Vision TJ Fast identification and statistical evaluation of segmental homologies in comparative maps. Bioinformatics 2003, 19(Suppl 1):i74-80. 10.1093/bioinformatics/btg1008 12855440
    • (2003) Bioinformatics , vol.19 , Issue.SUPPL. 1
    • Calabrese, P.P.1    Chakravarty, S.2    Vision, T.J.3
  • 6
    • 0037767267 scopus 로고    scopus 로고
    • LineUp: Statistical detection of chromosomal homology with application to plant comparative genomics
    • 430881 12695327 10.1101/gr.814403
    • Hampson S McLysaght A Gaut B Baldi P LineUp: Statistical detection of chromosomal homology with application to plant comparative genomics. Genome Res 2003, 13:999-1010. 430881 12695327 10.1101/gr.814403
    • (2003) Genome Res , vol.13 , pp. 999-1010
    • Hampson, S.1    McLysaght, A.2    Gaut, B.3    Baldi, P.4
  • 7
    • 0036613237 scopus 로고    scopus 로고
    • Extensive genomic duplication during early chordate evolution
    • 10.1038/ng884 12032567
    • McLysaght A Hokamp K Wolfe KH Extensive genomic duplication during early chordate evolution. Nat Genet 2002, 31:200-204. 10.1038/ng884 12032567
    • (2002) Nat Genet , vol.31 , pp. 200-204
    • McLysaght, A.1    Hokamp, K.2    Wolfe, K.H.3
  • 8
    • 17444395994 scopus 로고    scopus 로고
    • Statistical detection of chromosomal homology using shared-gene density alone
    • 10.1093/bioinformatics/bti168 15585535
    • Hampson SE Gaut BS Baldi P Statistical detection of chromosomal homology using shared-gene density alone. Bioinformatics 2005, 21:1339-1348. 10.1093/bioinformatics/bti168 15585535
    • (2005) Bioinformatics , vol.21 , pp. 1339-1348
    • Hampson, S.E.1    Gaut, B.S.2    Baldi, P.3
  • 9
    • 38549148339 scopus 로고    scopus 로고
    • EPGD: A comprehensive web resource for integrating and displaying eukaryotic paralog/paralogon information
    • 2238967 17984073 10.1093/nar/gkm924
    • Ding G Sun Y Li H Wang Z Fan H Wang C Yang D Li Y EPGD: A comprehensive web resource for integrating and displaying eukaryotic paralog/paralogon information. Nucleic Acids Res 2008, 36:D255-262. 2238967 17984073 10.1093/nar/gkm924
    • (2008) Nucleic Acids Res , vol.36
    • Ding, G.1    Sun, Y.2    Li, H.3    Wang, Z.4    Fan, H.5    Wang, C.6    Yang, D.7    Li, Y.8
  • 10
    • 23844501306 scopus 로고    scopus 로고
    • Identifying conserved gene clusters in the presence of homology families
    • 10.1089/cmb.2005.12.638 16108708
    • He X Goldwasser MH Identifying conserved gene clusters in the presence of homology families. J Comput Biol 2005, 12:638-656. 10.1089/ cmb.2005.12.638 16108708
    • (2005) J Comput Biol , vol.12 , pp. 638-656
    • He, X.1    Goldwasser, M.H.2
  • 11
    • 27644546689 scopus 로고    scopus 로고
    • The statistical analysis of spatially clustered genes under the maximum gap criterion
    • 10.1089/cmb.2005.12.1083 16241899
    • Hoberman R Sankoff D Durand D The statistical analysis of spatially clustered genes under the maximum gap criterion. J Comput Biol 2005, 12:1083-1102. 10.1089/cmb.2005.12.1083 16241899
    • (2005) J Comput Biol , vol.12 , pp. 1083-1102
    • Hoberman, R.1    Sankoff, D.2    Durand, D.3
  • 13
    • 0036613509 scopus 로고    scopus 로고
    • Age distribution of human gene families shows significant roles of both large- and small-scale duplications in vertebrate evolution
    • 10.1038/ng902 12032571
    • Gu X Wang Y Gu J Age distribution of human gene families shows significant roles of both large- and small-scale duplications in vertebrate evolution. Nat Genet 2002, 31:205-209. 10.1038/ng902 12032571
    • (2002) Nat Genet , vol.31 , pp. 205-209
    • Gu, X.1    Wang, Y.2    Gu, J.3
  • 14
    • 33344470194 scopus 로고    scopus 로고
    • Diagnosing duplications-can it be done?
    • 10.1016/j.tig.2006.01.002 16442663
    • Durand D Hoberman R Diagnosing duplications-can it be done?. Trends Genet 2006, 22:156-164. 10.1016/j.tig.2006.01.002 16442663
    • (2006) Trends Genet , vol.22 , pp. 156-164
    • Durand, D.1    Hoberman, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.