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Volumn 21, Issue 8, 2005, Pages 1339-1348

Statistical detection of chromosomal homology using shared-gene density alone

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; ARTICLE; CHROMOSOME ANALYSIS; CHROMOSOME DUPLICATION; CHROMOSOME INVERSION; CHROMOSOME STRUCTURE; COMPUTER PROGRAM; CONTROLLED STUDY; DENSITY; EVOLUTION; GENE DELETION; GENE INSERTION; GENETIC ALGORITHM; INFORMATION PROCESSING; INTERMETHOD COMPARISON; MAIZE; MATHEMATICAL COMPUTING; MONTE CARLO METHOD; NONHUMAN; PLANT GENETICS; POINT MUTATION; PRIORITY JOURNAL; RANDOMIZATION; SEQUENCE HOMOLOGY; STATISTICAL ANALYSIS; TIME;

EID: 17444395994     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/bti168     Document Type: Article
Times cited : (29)

References (23)
  • 2
    • 0037313579 scopus 로고    scopus 로고
    • A recent polyploidy superimposed on older large-scale duplications in the arabidopsis genome
    • Blanc,G., Hokamp,K. and Wolfe,K.H. (2003) A recent polyploidy superimposed on older large-scale duplications in the arabidopsis genome. Genome Res., 13, 136-144.
    • (2003) Genome Res. , vol.13 , pp. 136-144
    • Blanc, G.1    Hokamp, K.2    Wolfe, K.H.3
  • 3
    • 1042276327 scopus 로고    scopus 로고
    • Fast identification and statistical evaluation of segmental homologies in comparative maps
    • Calabrese,P.P., Chakravarty,S. and Vision,T.J. (2003) Fast identification and statistical evaluation of segmental homologies in comparative maps. Bioinformatics, 19 (Suppl. 1),74-80.
    • (2003) Bioinformatics , vol.19 , Issue.SUPPL. 1 , pp. 74-80
    • Calabrese, P.P.1    Chakravarty, S.2    Vision, T.J.3
  • 4
    • 0242606435 scopus 로고    scopus 로고
    • Tests for gene clustering
    • Durand,D. and Sankoff,D. (2003) Tests for gene clustering. J. Comput. Biol., 10, 453-482.
    • (2003) J. Comput. Biol. , vol.10 , pp. 453-482
    • Durand, D.1    Sankoff, D.2
  • 5
    • 0042027896 scopus 로고    scopus 로고
    • Structural dynamics of eukaryotic chromosome evolution
    • Eichler,E.E. and Sankoff,D. (2003) Structural dynamics of eukaryotic chromosome evolution. Science, 301, 793-797.
    • (2003) Science , vol.301 , pp. 793-797
    • Eichler, E.E.1    Sankoff, D.2
  • 6
    • 0035147066 scopus 로고    scopus 로고
    • Patterns of chromosomal duplication in maize and their implications for comparative maps of the grasses
    • Gaut,B.S. (2001) Patterns of chromosomal duplication in maize and their implications for comparative maps of the grasses. Genome Res., 11, 55-66.
    • (2001) Genome Res. , vol.11 , pp. 55-66
    • Gaut, B.S.1
  • 7
    • 0037767267 scopus 로고    scopus 로고
    • Lineup: Statistical detection of chromosomal homology with applications to plant comparative genomics
    • Hampson,S., McLysaght,A., Gaut,B. and Baldi,P. (2003) Lineup: statistical detection of chromosomal homology with applications to plant comparative genomics. Genome Res., 13, 999-1010.
    • (2003) Genome Res. , vol.13 , pp. 999-1010
    • Hampson, S.1    McLysaght, A.2    Gaut, B.3    Baldi, P.4
  • 8
    • 0037174983 scopus 로고    scopus 로고
    • Global gene expression profiling in Escherichia coli K12: The effects of leucine-responsive regulatory protein
    • Hung,S., Baldi,P., Wesley Hatfield,G., Hung,S. and Baldi,P. (2002) Global gene expression profiling in Escherichia coli K12: the effects of leucine-responsive regulatory protein. J. Biol. Chem. 277, 40309-40323.
    • (2002) J. Biol. Chem. , vol.277 , pp. 40309-40323
    • Hung, S.1    Baldi, P.2    Wesley Hatfield, G.3    Hung, S.4    Baldi, P.5
  • 9
    • 0035368857 scopus 로고    scopus 로고
    • Inversions and the dynamics of eukaryotic gene order
    • Huynen,M.A., Snel,B. and Bork,P. (2000) Inversions and the dynamics of eukaryotic gene order. Trends Genet., 17, 304-306.
    • (2000) Trends Genet. , vol.17 , pp. 304-306
    • Huynen, M.A.1    Snel, B.2    Bork, P.3
  • 10
    • 0034649566 scopus 로고    scopus 로고
    • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • Arabidopsis Genome Initiative
    • Arabidopsis Genome Initiative (2002) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408, 796-815.
    • (2002) Nature , vol.408 , pp. 796-815
  • 11
    • 0141815478 scopus 로고    scopus 로고
    • Evolution's cauldron: Duplication, deletion and rearrangement in the mouse and human genomes
    • Kent,W.J., Baertsch,R., Hinrichs,A., Miller,W. and Haussler,D. (2003) Evolution's cauldron: duplication, deletion and rearrangement in the mouse and human genomes. Proc. Natl Acad. Sci. USA, 100, 11484-11489.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 11484-11489
    • Kent, W.J.1    Baertsch, R.2    Hinrichs, A.3    Miller, W.4    Haussler, D.5
  • 12
    • 0000791476 scopus 로고
    • Lengths of chromosomal segments conserved since divergence of mouse and man
    • Nadeau,J.H. and Taylor,B.A. (1984) Lengths of chromosomal segments conserved since divergence of mouse and man. Proc. Natl Acad. Sci. USA, 81, 814-818.
    • (1984) Proc. Natl. Acad. Sci. USA , vol.81 , pp. 814-818
    • Nadeau, J.H.1    Taylor, B.A.2
  • 13
    • 0037264074 scopus 로고    scopus 로고
    • Genome rearrangements in mammalian evolution: Lessons from human and mouse genomes
    • Pevzner,P. and Tesler,G. (2003a) Genome rearrangements in mammalian evolution: lessons from human and mouse genomes. Genome Res. 13, 37-45.
    • (2003) Genome Res. , vol.13 , pp. 37-45
    • Pevzner, P.1    Tesler, G.2
  • 14
    • 0038271921 scopus 로고    scopus 로고
    • Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution
    • Pevzner,P. and Tesler,G. (2003b) Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution. Proc. Natl Acad. Sci. USA, 100, 7672-7677.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 7672-7677
    • Pevzner, P.1    Tesler, G.2
  • 17
    • 0033965281 scopus 로고    scopus 로고
    • Comparative genomics, marker density and statistical analysis of chromosome rearrangements
    • Schoen,D.J. (2000) Comparative genomics, marker density and statistical analysis of chromosome rearrangements. Genetics, 154 943-952.
    • (2000) Genetics , vol.154 , pp. 943-952
    • Schoen, D.J.1
  • 20
    • 0035099929 scopus 로고    scopus 로고
    • Synteny of orthologous genes conserved in mammals, snake, fly, nematode and fission yeast
    • Trachtulec,Z. and Forejt,J. (2001) Synteny of orthologous genes conserved in mammals, snake, fly, nematode and fission yeast. Mamm. Genome, 3, 227-231.
    • (2001) Mamm. Genome , vol.3 , pp. 227-231
    • Trachtulec, Z.1    Forejt, J.2
  • 21
    • 0036852286 scopus 로고    scopus 로고
    • The automatic detection of homologous regions (ADHoREe) and its application to microcolinearity between arabidopsis and rice
    • Vandepoele,K., Saeys,Y., Simillion,C., Raes,J. and Van De Peer,Y. (2002) The automatic detection of homologous regions (ADHoREe) and its application to microcolinearity between arabidopsis and rice. Genome Res., 11, 1792-1801.
    • (2002) Genome Res. , vol.11 , pp. 1792-1801
    • Vandepoele, K.1    Saeys, Y.2    Simillion, C.3    Raes, J.4    Van De Peer, Y.5
  • 22
    • 0034671866 scopus 로고    scopus 로고
    • The origins of genomic duplication in the Arabidopsis genome
    • Vision,T.J., Brown,D.G. and Tanksley,S.D. (2003) The origins of genomic duplication in the Arabidopsis genome. Science, 290, 2114-2117.
    • (2003) Science , vol.290 , pp. 2114-2117
    • Vision, T.J.1    Brown, D.G.2    Tanksley, S.D.3
  • 23
    • 0037370306 scopus 로고    scopus 로고
    • Molecular evolution meets the genomics revolution
    • Wolfe,K.H. and Li,W-H. (2003) Molecular evolution meets the genomics revolution. Nat. Genet., 33, 255-265.
    • (2003) Nat. Genet. , vol.33 , pp. 255-265
    • Wolfe, K.H.1    Li, W.-H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.