A novel dichloromethane-degrading Lysinibacillus sphaericus strain wh22 and its degradative plasmid

Applied Microbiology and Biotechnology

Volumn 82, Issue 4, 2009, Pages 731-740

  Wu, Shijin J ^a   Hu, Zhihang H ^a   Zhang, Lili L ^a   Yu, Xiang ^a   Chen, Jianmeng M ^a  

^a ZHEJIANG UNIVERSITY OF TECHNOLOGY   (China)

Author keywords

Biodegradation; Degradative plasmid; Dichloromethane; L. sphaericus wh22

Indexed keywords

BACTERIUM STRAINS; CELLULAR FATTY ACIDS; CONCENTRATION OF; DEGRADATIVE PLASMID; DEOXYRIBONUCLEIC ACIDS; DICHLOROETHANE; GENBANK; GENES CODING; GENETIC MANIPULATIONS; GENETICALLY ENGINEERED MICROORGANISMS; GENETICALLY MODIFIED; GUANINE CYTOSINES; HALOCARBONS; HEXACHLOROBENZENE; INDUSTRIAL EFFLUENTS; L. SPHAERICUS WH22; MICROBIAL STRAINS; MOLE PERCENTS; NUCLEOTIDE SEQUENCE ANALYSIS; PHYSIOLOGICAL PROPERTIES; TRICHLOROETHANE; WASTE GAS;

BIOCHEMISTRY; BIODEGRADATION; DEGRADATION; DICHLOROMETHANE; EFFLUENTS; ESCHERICHIA COLI; FATTY ACIDS; MICROBIOLOGY; NUCLEIC ACIDS; ORGANIC ACIDS; SEWAGE; TRICHLOROETHYLENE;

STRAIN;

BACTERIUM; BIODEGRADATION; ENZYME ACTIVITY; METHANE; PLASMID;

BACTERIA; DNA, BACTERIAL; DNA, RIBOSOMAL; ESCHERICHIA COLI; METHYLENE CHLORIDE; MOLECULAR SEQUENCE DATA; PHYLOGENY; PHYSICAL CHROMOSOME MAPPING; PLASMIDS; RNA, RIBOSOMAL, 16S; SEWAGE; TRANSFORMATION, BACTERIAL;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 61449231519     PISSN: 01757598     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00253-009-1873-3     Document Type: Article

References (34)

1. MA Bhat M Tsuda K Horiike M Nozaki CS Vaidyanathan T Nakazawa 1994 Identification and characterisation of a new plasmid carrying genes for degradation of 2,4-dichlorophenoxyacetate from Pseudomonas cepacia CSV90 Appl Environ Microbiol 60 306 312
2. W Brunner D Staub T Leisinger 1980 Bacterial degradation of dichloromethane Appl Environ Microbiol 40 950 958
3. JG Chung HF Lu CC Yeh KC Cheng SS Lin JH Lee 2004 Inhibition of N-acetyltransferase activity and gene expression in human colon cancer cell lines by diallyl sulfide Food Chem Toxicol 42 2 195 202
4. GR Chaudhry GH Huang 1988 Isolation and characterisation of a new plasmid from a Flavobacterium sp. which carries the genes for degradation of 2,4-dichlorophenoxyacetate J Bacteriol 170 3897 3902
5. NV Doronina YA Trotsenko TP Tourova BB Kuznetzov T Leisinger 2000 Methylophila helvetica sp. nov. and Methylobacterium dichloromethanicum sp. nov.-novel aerobic facultatively methylotrophic bacteria utilizing dichloromethane Syst Appl Microbiol 23 210 218
6. RH Don JM Pemberton 1985 Genetic and physical map of the 2,4-dichlorophenoxyacetic acid-degradative plasmid pJP4 J Bacteriol 161 466 468
7. Dong XZ, Cai MY (2001) Manual of general bacteria systemic identification. Science Press, Beijing, pp 180-182
8. L Fishbein 1976 Industrial mutagens and potential mutagens. I. Halogenated aliphatic derivatives Mutat Res 32 267 308
9. 1H nuclear magnetic resonance spectrometry and multivariate analysis techniques Phytochemistry 65 1999 2004
10. D Gisi L Willi H Traber T Leisinger S Vuilleumier 1998 Effects of bacterial host and DCM dehalogenases on the competitiveness of methylotrophic bacteria growing with dichloromethane Appl Environ Microbiol 64 1194 1202
11. KD Goodwin JK Schaefer RS Oremland 1998 Bacterial oxidation of dibromomethane and methyl bromide in natural waters and enrichment cultures Appl Environ Microbiol 64 4629 4636
12. J Havel W Reineke 1991 Total degradation of various chlorobiphenyls by cocultures and in vivo constructed hybrid pseudomonads FEMS Microbiol Lett 78 163 170
13. D Kohler-Staub S Hartmans R Galli F Suter T Leisinger 1986 Evidence for identical dichloromethane dehalogenases in different methylotrophic bacteria J Gen Microbiol 132 2837 2843
14. IO Ka JM Tiedje 1994 Integration and excision of a 2,4- dichlorophenoxyacetic acid-degradative plasmid in natural intergeneric transfer J Bacteriol 176 5284 5289
15. LT LaPat-Polasko PL McCarty AJB Zehnder 1984 Secondary substrate utilization of methylene chloride byan isolated strain of Pseudomonas sp Appl Environ Microbiol 47 825 830
16. ZQ Liu Y Li LF Ping 2007 Isolation and identification of a novel Rhodococcus sp. ML-0004 producing epoxide hydrolase and optimization of enzyme production Process Biochem 42 889 894
17. IR McDonald NV Doronina YA Trotsenko C McAnulla JC Murrell 2001 Hyphomicrobium chloromethanicum sp. nov. and Methylobacterium chloromethanicum sp. nov., chloromethane-utilizing bacteria isolated from a polluted environment Int J Syst Evol Microbiol 51 119 122
18. AA Mae RO Marits NR Ausmees VM Koiv AL Heinaru 1993 Characterisation of a new 2,4-dichlorophenoxyacetic acid degradating plasmid pEST4011: physical map and localisation of catabolic genes J Gen Microbiol 139 3164 3170
19. Maniatis T, Fritsch EF, Sambrook J (1982) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y
20. Y Nagata K Miyauchi J Damborsky K Manova A Ansorgova M Takagi 1997 Purification and characterization of a haloalkane dehalogenase of a new substrate class from a y-hexachlorocyclohexane-degrading bacterium, Sphingomonas paucimobilis UT26 Appl Environ Microbiol 63 3707 3710
21. D Prakash A Chauhan RK Jain 1996 Plasmid encoded degradation of p-nitrophenol by P. cepacia Biochem Biophys Res Commun 224 375 381
22. BE Rittmann PL McCarty 1980 Utilization of dichloromethane by suspended and fixed-film bacteria Appl Environ Microbiol 39 1225 1226
23. R Simon U Priefer A Puhler 1983 A broad host range mobilization system for in vivo genetic engineering: transposon mutagenesis in gram-negative bacteria Biotechnology 1 784 791
24. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual, 2nd edn. Coldspring Harbour Laboratory Press, USA
25. G Stucki W Brunner D Staub T Leisinger 1981
26. I Singleton 1994 Microbial metabolism of xenobiotics: fundamental and applied research J Chem Technol Biotechnol 59 9 23
27. D Tautz M Renz 1983 An optimized freeze-squeeze method for recovery of DNA fragments from agarose gels Anal Biochem 132 14 19
28. T Vannelli M Messmer A Studer S Vuilleumier T Leisinger 1999 A corrinoid-dependent catabolic pathway for growth of a Methylobacterium strain with chloromethane Proc Natl Acad Sci U S A 96 4615 4620
29. JD Wang JM Chen 2006 Removal of dichloromethane from waste gases with a bio-contact oxidation reactor Chem Eng J 123 3 103 107
30. SJ Wu LL Zhang JD Wang JM Chen 2007 Bacillus circulans WZ-12-a newly discovered aerobic dichloromethane-degrading methylotrophic bacterium Appl Microbiol Biotechnol 76 6 1289 1296
31. RC Wyndham AE Cashore CH Nakatsu MC Peel 1994 Catabolic transposons Biodegradation 5 323 342
32. RB Winter KM Yen BD Ensley 1989 Efficient degradation of trichloroethylene by a recombinant Escherichia coli Biotechnology 7 282 285
33. E Yabuuchi I Yano H Oyaizu Y Hashimoto T Ezaki H Yamamoto 1990 Proposals of Sphingomonas paucimobilis gen. nov. and comb. nov., Sphingomonas parapaucimobilis sp.nov., Sphingomonas yanoikuyae sp. nov., Sphingomonas adhaesiva sp. nov., Sphingomonas capsulata comb. nov., and two genospecies of the genus Sphingomonas Microbiol Immunol 34 99 119
34. GJ Zylstra LP Wackett DT Gibson 1989 Trichloroethylene degradation by E. coli containing cloned Pseudomonas putida F1 toluene dioxygenase genes Appl Environ Microbiol 55 3162 3166