메뉴 건너뛰기




Volumn 59, Issue 1, 2009, Pages 69-72

Pedobacter daechungensis sp. nov., from freshwater lake sediment in South Korea

Author keywords

[No Author keywords available]

Indexed keywords

FATTY ACID; FRESH WATER; GENOMIC DNA; MENAQUINONE; RNA 16S; BACTERIAL DNA; RIBOSOME DNA;

EID: 60549095482     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.001529-0     Document Type: Article
Times cited : (34)

References (23)
  • 1
    • 0020407158 scopus 로고
    • Nonstaining (KOH) method for determination of Gram reactions of marine bacteria
    • Buck, J. D. (1982). Nonstaining (KOH) method for determination of Gram reactions of marine bacteria. Appl Environ Microbiol 44, 992-993.
    • (1982) Appl Environ Microbiol , vol.44 , pp. 992-993
    • Buck, J.D.1
  • 2
    • 0024358339 scopus 로고
    • Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
    • Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 224-229
    • Ezaki, T.1    Hashimoto, Y.2    Yabuuchi, E.3
  • 3
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 4
    • 69049086675 scopus 로고    scopus 로고
    • Hall, T. A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41, 95-98.
    • Hall, T. A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41, 95-98.
  • 5
    • 0030435636 scopus 로고    scopus 로고
    • Comparative lipoquinone analysis of influent sewage and activated sludge by high-performance liquid chromatography and photodiode array detection
    • Hiraishi, A., Ueda, Y., Ishihara, J. & Mori, T. (1996). Comparative lipoquinone analysis of influent sewage and activated sludge by high-performance liquid chromatography and photodiode array detection. J Gen Appl Microbiol 42, 457-469.
    • (1996) J Gen Appl Microbiol , vol.42 , pp. 457-469
    • Hiraishi, A.1    Ueda, Y.2    Ishihara, J.3    Mori, T.4
  • 6
    • 33747883185 scopus 로고    scopus 로고
    • Pedobacter roseus sp. nov., isolated from a hypertrophic pond, and emended description of the genus Pedobacter
    • Hwang, C. Y., Choi, D. H. & Cho, B. C. (2006). Pedobacter roseus sp. nov., isolated from a hypertrophic pond, and emended description of the genus Pedobacter. Int J Syst Evol Microbiol 56, 1831-1836.
    • (2006) Int J Syst Evol Microbiol , vol.56 , pp. 1831-1836
    • Hwang, C.Y.1    Choi, D.H.2    Cho, B.C.3
  • 7
    • 19344364985 scopus 로고    scopus 로고
    • Sphingopyxis granuli sp. nov., a β-glucosidase producing bacterium in the family Sphingomonadaceae in α-4 subclass of the Proteobacteria
    • Kim, M. K., Im, W.-T., Ohta, H., Lee, M. & Lee, S.-T. (2005). Sphingopyxis granuli sp. nov., a β-glucosidase producing bacterium in the family Sphingomonadaceae in α-4 subclass of the Proteobacteria. J Microbiol 43, 152-157.
    • (2005) J Microbiol , vol.43 , pp. 152-157
    • Kim, M.K.1    Im, W.-T.2    Ohta, H.3    Lee, M.4    Lee, S.-T.5
  • 9
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated Software for Molecular Evolutionary Genetics Analysis and sequence alignment
    • Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: Integrated Software for Molecular Evolutionary Genetics Analysis and sequence alignment. Brief Bioinform 5, 150-163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 10
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography
    • Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 11
    • 0003174184 scopus 로고
    • Preparation and analysis of DNA
    • Edited by F. W. Ausubel, R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith & K. Struhl. New York: Wiley
    • Moore, D. D. & Dowhan, D. (1995). Preparation and analysis of DNA. In Current Protocols in Molecular Biology, pp. 2-11. Edited by F. W. Ausubel, R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith & K. Struhl. New York: Wiley.
    • (1995) Current Protocols in Molecular Biology , pp. 2-11
    • Moore, D.D.1    Dowhan, D.2
  • 12
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 14
    • 19544372992 scopus 로고    scopus 로고
    • Pedobacter himalayensis sp. nov., from the Hamta glacier located in the Himalayan mountain ranges of India
    • Shivaji, S., Chaturvedi, P., Reddy, G. S. N. & Suresh, K. (2005). Pedobacter himalayensis sp. nov., from the Hamta glacier located in the Himalayan mountain ranges of India. Int J Syst Evol Microbiol 55, 1083-1088.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 1083-1088
    • Shivaji, S.1    Chaturvedi, P.2    Reddy, G.S.N.3    Suresh, K.4
  • 15
    • 0028028182 scopus 로고
    • Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 16
    • 0031894349 scopus 로고    scopus 로고
    • Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. Proposal of the family Sphingobacteriaceae fam. nov
    • Steyn, P. L., Segers, P., Vancanneyt, M., Sandra, P., Kersters, K. & Joubert, J. J. (1998). Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. Proposal of the family Sphingobacteriaceae fam. nov. Int J Syst Bacteriol 48, 165-177.
    • (1998) Int J Syst Bacteriol , vol.48 , pp. 165-177
    • Steyn, P.L.1    Segers, P.2    Vancanneyt, M.3    Sandra, P.4    Kersters, K.5    Joubert, J.J.6
  • 17
    • 1142273245 scopus 로고    scopus 로고
    • Development of a plate technique for screening of polysaccharide-degrading microorganisms by using a mixture of insoluble chromogenic substrates
    • Ten, L. N., Im, W.-T., Kim, M.-K., Kang, M.-S. & Lee, S.-T. (2004). Development of a plate technique for screening of polysaccharide-degrading microorganisms by using a mixture of insoluble chromogenic substrates. J Microbiol Methods 56, 375-382.
    • (2004) J Microbiol Methods , vol.56 , pp. 375-382
    • Ten, L.N.1    Im, W.-T.2    Kim, M.-K.3    Kang, M.-S.4    Lee, S.-T.5
  • 18
    • 33751208318 scopus 로고    scopus 로고
    • Pedobacter gingsengisoli sp. nov., a DNase-producing bacterium isolated from soil of a ginseng field in South Korea
    • Ten, L. N., Liu, Q.-M., Im, W.-T., Lee, M., Yang, D.-C. & Lee, S.-T. (2006). Pedobacter gingsengisoli sp. nov., a DNase-producing bacterium isolated from soil of a ginseng field in South Korea. Int J Syst Evol Microbiol 56, 2565-2570.
    • (2006) Int J Syst Evol Microbiol , vol.56 , pp. 2565-2570
    • Ten, L.N.1    Liu, Q.-M.2    Im, W.-T.3    Lee, M.4    Yang, D.-C.5    Lee, S.-T.6
  • 19
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 20
    • 19544392194 scopus 로고    scopus 로고
    • Pedobacter caeni sp. nov., a novel species isolated from a nitrifying inoculum
    • Vanparys, B., Heylen, K., Lebbe, L. & De Vos, P. (2005). Pedobacter caeni sp. nov., a novel species isolated from a nitrifying inoculum. Int J Syst Evol Microbiol 55, 1315-1318.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 1315-1318
    • Vanparys, B.1    Heylen, K.2    Lebbe, L.3    De Vos, P.4
  • 22
    • 34848917966 scopus 로고    scopus 로고
    • Pedobacter lentus sp. nov. and Pedobacter terricola sp. nov., isolated from soil
    • Yoon, J.-H., Kang, S.-J., Park, S. & Oh, T.-K. (2007a). Pedobacter lentus sp. nov. and Pedobacter terricola sp. nov., isolated from soil. Int J Syst Evol Microbiol 57, 2089-2095.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 2089-2095
    • Yoon, J.-H.1    Kang, S.-J.2    Park, S.3    Oh, T.-K.4
  • 23
    • 33847241884 scopus 로고    scopus 로고
    • Pedobacter panaciterrae sp. nov., isolated from soil in South Korea
    • Yoon, M.-H., Ten, L. N., Im, W.-T. & Lee, S.-T. (2007b). Pedobacter panaciterrae sp. nov., isolated from soil in South Korea. Int J Syst Evol Microbiol 57, 381-386.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 381-386
    • Yoon, M.-H.1    Ten, L.N.2    Im, W.-T.3    Lee, S.-T.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.