European cave shrimp species (Decapoda: Caridea: Atyidae), redefined after a phylogenetic study; Redefinition of some taxa, a new genus and four new Troglocaris species

Zoological Journal of the Linnean Society

Volumn 155, Issue 4, 2009, Pages 786-818

  Sket, Boris ^a   ZakŠek, Valerija ^a  

^a UNIVERSITY OF LJUBLJANA   (Slovenia)

Author keywords

Europe; Freshwater; New taxa; Phylogeny; Subterranean; Systematics

Indexed keywords

ATYIDAE (CRUSTACEANS); CARIDEA; DECAPODA (CRUSTACEA); TROGLOCARIS; TYPHLATYA;

EID: 60549084338     PISSN: 00244082     EISSN: 10963642     Source Type: Journal    
DOI: 10.1111/j.1096-3642.2008.00473.x     Document Type: Article

References (68)

1. Absolon K. 1916. Z vyzkumnych cest po krasech Balkanu. Zlata Praha 33 : 574 576, 586 588, 597 600, 609 612, 622 624.
2. Alvarez F, Iliffe TM, Villalobos JL. 2005. New species of the genus Typhlatya (Decapoda: Atyidae) from anchialine caves in Mexico, the Bahamas, and Honduras. Journal of Crustacean Biology 25 : 81 94.
3. Anastasiadou C, Kitsos MS, Koukouras A. 2006. Redescription of Atyaephyra desmarestii (Millet, 1831) (Decapoda, Caridea, Atyidae) based on topotypical specimens. Crustaceana 79 : 1195 1207.
4. Babić K. 1922. Über die drei Atyiden aus Jugoslavien. Glasnik Hrvatskog prirodoslovnog druŠtva 34 : 300 306.
5. Bauer RT. 1979. Antifouling adaptations of marine shrimp (Decapoda: Caridea): gill cleaning mechanisms and grooming of brooded embryos. Zoological Journal of the Linnean Society 65 : 281 303.
6. Birstein JA. 1933. Malacostraca der Kutais-Höhlen am Rion (Transkaukasus, Georgien). Zoologischer Anzeiger 104 : 143 156.
7. BirŠtejn (Birstein) JA. 1939. O peŠčernyh krevetkah Abhazii. Zoologičeskij žurnal 18 : 960 975.
8. BirŠtejn JA. 1948. Nahoždenie peŠčernoj krevetki v gruntovyh vodah Macesty i svjazannye s etim voprosy. Bjulletin Moskovskogo obŠčestva ispitatelei prirody (Bull. Soc. Nat Moscou) 53 : 3 10.
9. Botosaneanu L, Holthuis LB. 1970. Subterranean shrimps from Cuba (Crustacea Decapoda Natantia). Travaux de l'Institut de Speologie 'Emile Racovitza 9 : 121 133.
10. Bouvier LME. 1925. Recherches sur la morphologie, les variations, la distribution géographique des crevettes de la famille des Atyides. Paris : Paul Lechevalier.
11. Bouvier LME. 1912. Dugastella marocana, crevette primitive nouvelle de la famille des Atyides. Academie des Sciences. Memoires et communications des members et des correspondants de l'Academie 155 : 993 998.
12. Chace FA. 1942. A new cave shrimp from Cuba. Proceedings of the New England zoological club 19 : 99 102, plate 29.
13. Chace FA. 1954. Two new subterranean shrimps (Decapoda: Caridea) from Florida and the West Indies, with a revised key to the American species. Journal of the Washington academy of sciences 44 : 318 324.
14. Chace FA. 1983. The Atya-like Shrimps of the Indo-Pacific Region (Decapoda: Atyidae). Smithsonian contributions to zoology 384 : 1 54.
15. Chace FA. 1997. The caridean shrimps (Crustacea: Decapoda) of the Albatross Philippine expedition, 1907-1910, part 7. Smithsonian contributions to zoology 587 : 1 106.
16. Chace FA, Manning RB. 1972. Two new caridean shrimps, one representing a new family, from marine pools on Ascension Island (Crustacea: Decapoda: Natantia). Smithsonian contributions to zoology 131 : 1 18.
17. Cobolli Sbordoni M, Mattoccia M, Rosa GL, Matthaeis E, Sbordoni V. 1990. Secondary sympatric occurence of sibling species of subterranean shrimps in the Karst. International Journal of Speleology 19 : 9 27.
18. Creaser EP. 1936. Crustaceans from Yucatan. In : Pearse AS, Creaser EP, Hall FG, eds. The cenotes of Yucatan: a zoological and hydrographic survey, Vol. 457. Washington : Carnegie institution of Washington publications, 17 132.
19. Dormitzer M. 1853. Troglocaris Schmidtii. Lotos 3 : 85 88.
20. Fabjan E. 2001. Prispevek k taksonomiji jamskih kozic Troglocaris (Crustacea: Decapoda: Atyidae). (Contribution to the taxonomy of the cave shrimps Troglocaris (Crustacea: Decapoda: Atyidae). Graduation thesis, Univerza v Ljubljani, BiotehniŠka fakulteta.
21. Fage L. 1931. Crustacés Amphipodes et Décapodes. In: Biospéologica, LVI: Campagne Spéologique de C: Bolivar et R. Jeannel dans l'Amérique du Nord (1928). Archives de zoologie expérimentale et générale 71 : 361 374.
22. Fage L. 1937. Troglocaris schmidtii subspecies nova: inermis Crustacé décapode aveugle des eaux souterraines francaises. Archives de zoologie expérimentale et générale 78 : 215 230.
23. Ferrer Galdiano M. 1924. Una nueva especie de Atyaephyra (Decapoda, Atyidae). Boletin de la Real Sociedad Espanola de Historia Natural 25 : 210 213.
24. Franjević D. 2006. Molekularna filogenija dinaridskih vrsta roda Troglocaris (Crustacea, Caridea, Atyidae). Doctor thesis, Zagreb: Prirodoslovno-matematički fakultet.
25. Goldstein JS, Tlusty MF. 2003. Substrate determinants and developmental rate of claw asymmetry in American lobsters, Homarus americanus. Journal of Crustacean Biology 23 : 890 896.
26. Gottstein Matočec S. 2003. Intraspecijska i interspecijska varijabilnost podzemnih kozica roda Troglocaris (Crustacea, Natantia, Atyidae) u Dinarskom krŠu. Doctor thesis, Zagreb: Prirodoslovno-matematički fakultet.
27. Govind CK, Pearce J. 1989. Critical period for determining claw asymmetry in developing lobsters. Journal experimental zoology 249 : 31 35.
28. Guindon S, Gascuel O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Systematic Biology 52 : 696 704.
29. Hobbs H III., Hobbs HH Jr. 1976. On the troglobitic shrimps of the Yucatan Peninsula, Mexico (Decapoda: Atyidae and Palaemonidae). Smithsonian contributions to zoology 240 : 1 23.
30. Holthuis LB. 1956. An enumeration of the Crustacea Decapoda Natantia inhabiting subterranean waters. Vie et Milieu 6 : 43 76.
31. Holthuis LB. 1986. A new genus and species of subterranean shrimp from western Australia (Crustacea: Decapoda: Atyidae). Zoologische Mededelingen 60 : 103 111.
32. Holthuis LB. 1993. The recent genera of the Caridean and Stenopodidean shrimps (Crustacea, Decapoda): with an appendix on the order Amphionidacea. Leiden : Nationaal Natuurhistorisch Museum.
33. Hunter RL, Webb MS, Iliffe TM, Alvarado Bremer JR. 2008. Phylogeny and historical biogeography of the cave-adapted shrimp genus Typhlatya (Atyidae) in the Caribbean Sea and western Atlantic. Journal of Biogeography 35 : 65 75.
34. ICZN (International Commission on Zoological Nomenclature). 1999. International Code of Zoological Nomenclature, Fourth Edition. London : The International Trust for Zoological Nomenclature R/O The Natural History Museum.
35. Jaume D, Bréhier F. 2005. A new species of Typhlatya (Crustacea: Decapoda: Atyidae) from anchialine caves on the French Mediteranean coast. Zoological Journal of the Linnean Society 144 : 387 414.
36. Juarrero A. 1994. Nueva especie de camaron cavernicola (Decapoda: Atyidae: Typhlatya) de Cuba. A new species of cavernicolous shrimp (Decapoda: Atyidae: Typhlatya) from Cuba. Avicennia 1 : 57 66.
37. Juarrero A, Ortiz M. 2000. El género Typhlatya (Crustacea: Decapoda: Atyidae) en Cuba, con la descripción de una nueva especie. Avicennia 12/13 : 45 54.
38. JuzbaŠ'jan SM. 1940a. O peŠčernyh Atyidae. Akademija Nauk SSSR - Zakavkazskij Filial Gruzinskoe Otdelenie. Trudy zoologičeskogo sektora (Trav. zool. Acad. Sci. USSR sect. Georg.) 3 : 153 172.
39. JuzbaŠ'jan SM. 1940b. O Šakuranskoj peŠčernoj krevetke. Trudy biologičeskoj stancii Narkomprosa Gruzinskoj SSR (Arb. biol. Hochgebirgssta. Komiss. Volksbild. georg. SSR) 1 : 73 86.
40. JuzbaŠ'jan (Yuzbashyan) SM. 1940c. O redukcii nekotoryh organov u peŠčernyh Atyidae urnal obŠčej biologii 1 : 309 316.
41. JuzbaŠ'jan SM. 1951. O regressivnyh javlenijah u peŠčernyh Atyidae. Zoologičeskij žurnal 30 : 499 512.
42. Keane TM, Creevey CJ, Pentony MM, Naughton TJ, McInerney OJ. 2006. Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified. BMC Evolutionary Biology 6 : 29.
43. Klotz W, Karge A. 2007. Süßwassergarnelen aus aller Welt. Ettlingen : Dähne Verlag.
44. Kollar V. 1848. Über ein neues sehr merkwürdiges Crustaceum aus den unterirdischen Gewässern von Krain, welches Herr Custos H. Freyer an das k.k. Hof-Naturalien-Cabinet eingesendet hat. Sitzungsberichte der Akademie der Wissenschaften in Wien 2 : 200 202.
45. Liang X, Cai Y. 1999. Sinodina, a new genus of freshwater shrimnps (Crustacea: Decapoda: Atyidae) from southern China, with descriptions of three new species. Raffles Bulletin of Zoology, Singapore 47 : 577 590.
46. Martin JW, Wicksten MK. 2004. Review and redescription of the freshwater atyid shrimp genus Syncaris Holmes, 1900, in California. Journal of Crustacean Biology 24 : 447 462.
47. MatjaŠič J. 1956a. Ein neuer Höhlendecapode aus Jugoslawien. Zoologischer Anzeiger 157 : 65 68.
48. MatjaŠič J. 1956b. Eine neue Höhlengarnele aus Herzegowina. Bulletin Scientifique Yugoslavie 3 : 8.
49. MatjaŠič J. 1960. O vjetreniŠkih troglocarisih (Über zwei Troglocaris-arten aus Vjetrenica). BioloŠki vestnik 7 : 75 80.
50. Mayr E. 1969. Principles of systematic zoology. New York : McGraw-Hill.
51. Mayr E, Ashlock PD. 1991. Principles of systematic zoology. Singapore : Mcgraw-Hill College.
52. Monod T, Cals P. 1970. Sur une espece nouvelle de crevette cavernicole: Typhlatya galapagensis (Decapoda Natantia; Atyidea). Mission zoologique belge aux iles Galapagos et en Ecuador 2 : 57 103.
53. Mugue N, Zueva O, Ershov A. 2001. Cave shrimps, genus Troglocaris (Decapoda: Atyidae), in West Transcaucasus: genetics of sympatric and allopatric populations. In : Trajano E, Pinto-da-Rocha R, eds. Abstracts of the XVth International Symposium of Biospeleology. São Paulo : Instituto de Biociências da Universidade, 36 37.
54. Page TJ, Humphreys WF, Hughes JM. 2008. Shrimps down under: Evolutionary relationships of subterranean crustaceans from Western Australia (Decapoda: Atyidae: Stygiocaris). PLoS ONE 3 : e1618.
55. Richard J, Clark PF. 2005. Caridina nilotica (P. Roux, 1833) (Crustacea: Decapoda: Caridea: Atyidae) from East Africa, with descriptions of four new species. Proceedings of the Biological Society of Washington 118 : 706 730.
56. Sadovskij (Sadowsky) AA. 1930. Xiphocaridinella kutaissiana nov. gen. et sp. (sem. Atyidae) iz podzemnoj peŠčery pod Kutaisom. Zakavkazskij kraevedstvenny sbornik naučno-issledovatel'nogo kraevedstvenogo kabineta Universiteta Tiflis 1 : 93 104.
57. Sanz S, Platvoet D. 1995. New perspectives on the evolution of the genus Typhlatya (Crustacea, Decapoda): first record of a cavernicolous atyid in the Iberian Peninsula, Typhlatya miravetensis n. sp. Contributions to Zoology (Amsterdam) 65 : 215 296.
58. Sket B. 1992. Rdeči seznam ogroženih sladkovodnih viŠjih rakov (Malacostraca aquatica: Isopoda, Amphipoda, Decapoda) v Sloveniji (The Red Data List of endangered freshwater Malacostraca (Isopoda aquatica, Amphipoda, Decapoda) in Slovenia). Varstvo narave 17 : 147 156.
59. Sket B. 1994. Distribution patterns of some subterranean Crustacea in the territory of the former Yugoslavia. Hydrobiologia 287 : 65 75.
60. Sket B. 2003. O podzemnoj fauni, prvenstveno Vjetrenice (Cave fauna, the particular case of Vjetrenica). In : Lučić I, ed. Vjetrenica, pogled u duŠu Zemlje (Vjetrenica, insight into the Earth's soul). Zagreb : ArTresor, 149 202.
61. Sket B, Zagmajster M. 2006. Subterranean fauna of Montenegro: its biodiversity and biogeographical character. In : PeŠić V, Hadžiablahović S, eds. II international symposium of ecologists of the Republic of Montenegro, Kotor, 20-24. 09. 2006. Book of abstracts and programme. Podgorica : Centre for biodiversity of Montenegro, 23 24.
62. Stammer HJ. 1932. Die Fauna des Timavo. Ein Beitrag zur Kenntnis der Höhlengewässer, des Süss- und Brackwassers im Karst. Zoologische Jahrbücher, Abteilung Systematik 63 : 521 656.
63. Stammer HJ. 1933. Einige seltene oder neue Höhlentiere. Zoologischer Anzeiger 6 (Suppl. 263 266.
64. Stammer HJ. 1935. Untersuchungen über die Tierwelt der Karsthöhlengewässer. Verhandlungen der Internationellen Vereinigung Limnologie 7 : 92 99.
65. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The CLUSTALX Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 24 : 4876 4882.
66. d'Udekem d'Acoz C. 1999. Inventaire et distribution des crustaces decapodes de l'Atlantique nord-oriental, de la Mediterranee et des eaux continentales adjacentes au nord de 25°N. Patrimoines Naturels (MNHN/SPN) 40 : 1 383.
67. Wilkens H. 1988. Evolution and genetics of epigean and cave Astyanax fasciatus (Characidae, Pisces. In : Hecht MK, Wallace B, eds. Evolutionary biology, Vol. 23. New York : Plenum Publishing Corporation, 271 236.
68. ZakŠek V, Sket B, Trontelj P. 2007. Phylogeny of the cave shrimp Troglocaris: evidence of a young connection between Balkans and Caucasus. Molecular Phylogenetics and Evolution 42 : 223 235.