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Volumn 6, Issue 4, 2004, Pages 364-377

Metabolic design based on a coupled gene expression - Metabolic network model of tryptophan production in Escherichia coli

Author keywords

Central carbon metabolism; Gene expression; Nonlinear optimization; Tryptophan synthesis

Indexed keywords

TRYPTOPHAN;

EID: 6044249046     PISSN: 10967176     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ymben.2004.06.003     Document Type: Article
Times cited : (61)

References (28)
  • 1
    • 0022578073 scopus 로고
    • Interaction of the Escherichia coli trp aporeressor with its ligand, L-tryptophan
    • D.N. Arvidson, C. Bruce, and R.P. Gunsalus Interaction of the Escherichia coli trp aporeressor with its ligand, L-tryptophan Journal of Biological Chemistry 261 1986 238 243
    • (1986) Journal of Biological Chemistry , vol.261 , pp. 238-243
    • Arvidson, D.N.1    Bruce, C.2    Gunsalus, R.P.3
  • 2
    • 0035209901 scopus 로고    scopus 로고
    • Metabolic engineering for microbial production of aromatic amino acids and derived compounds
    • J. Bongaerts, M. Krämer, U. Müller, L. Raeven, and M. Wubbolts Metabolic engineering for microbial production of aromatic amino acids and derived compounds Metabolic Engineering 3 2001 289 300
    • (2001) Metabolic Engineering , vol.3 , pp. 289-300
    • Bongaerts, J.1    Krämer, M.2    Müller, U.3    Raeven, L.4    Wubbolts, M.5
  • 4
    • 0027772102 scopus 로고
    • Identification and removal of impediments to biocatalytic synthesis of aromatics from D-glucose: Rate-limiting enzymes in the common pathway of aromatic amino acid biosynthesis
    • K.A. Dell, and J.W. Frost Identification and removal of impediments to biocatalytic synthesis of aromatics from D-glucose rate-limiting enzymes in the common pathway of aromatic amino acid biosynthesis Journal of American Chemical Society 115 1993 11581 11589
    • (1993) Journal of American Chemical Society , vol.115 , pp. 11581-11589
    • Dell, K.A.1    Frost, J.W.2
  • 5
    • 0020612907 scopus 로고
    • Expression of naphthalene oxidation genes in Escherichia coli results in the biosynthesis of indigo
    • B.D. Ensley, B.J. Ratzkin, T.D. Osslund, M.J. Simon, L.P. Wackett, and D.T. Gibson Expression of naphthalene oxidation genes in Escherichia coli results in the biosynthesis of indigo Science 222 1983 167 169
    • (1983) Science , vol.222 , pp. 167-169
    • Ensley, B.D.1    Ratzkin, B.J.2    Osslund, T.D.3    Simon, M.J.4    Wackett, L.P.5    Gibson, D.T.6
  • 6
  • 7
    • 0027572108 scopus 로고
    • A simple genetically structured model of trp repressor-operator interactions
    • B.T. Koh, and M.G.S. Yap A simple genetically structured model of trp repressor-operator interactions Biotechnology and Bioengineering 41 1993 707 714
    • (1993) Biotechnology and Bioengineering , vol.41 , pp. 707-714
    • Koh, B.T.1    Yap, M.G.S.2
  • 8
    • 2642704240 scopus 로고    scopus 로고
    • Genetically structured mathematical modeling of trp attenuator mechanism
    • B.T. Koh, R.B.H. Tan, and M.G.S. Yap Genetically structured mathematical modeling of trp attenuator mechanism Biotechnology and Bioengineering 58 1997 502 509
    • (1997) Biotechnology and Bioengineering , vol.58 , pp. 502-509
    • Koh, B.T.1    Tan, R.B.H.2    Yap, M.G.S.3
  • 9
    • 0034805944 scopus 로고    scopus 로고
    • The organization of metabolic reaction networks: II. Signal processing in hierarchical structured functional units
    • A. Kremling, and E.D. Gilles The organization of metabolic reaction networks II. Signal processing in hierarchical structured functional units Metabolic Engineering 3 2 2001 138 150
    • (2001) Metabolic Engineering , vol.3 , Issue.2 , pp. 138-150
    • Kremling, A.1    Gilles, E.D.2
  • 10
    • 0035206064 scopus 로고    scopus 로고
    • The organization of metabolic reaction networks: III. Application for diauxic growth on glucose and lactose
    • A. Kremling, K. Bettenbrock, B. Laube, K. Jahreis, J.W. Lengeler, and E.D. Gilles The organization of metabolic reaction networks III. Application for diauxic growth on glucose and lactose Metabolic Engineering 3 4 2001 362 379
    • (2001) Metabolic Engineering , vol.3 , Issue.4 , pp. 362-379
    • Kremling, A.1    Bettenbrock, K.2    Laube, B.3    Jahreis, K.4    Lengeler, J.W.5    Gilles, E.D.6
  • 11
    • 84978701453 scopus 로고    scopus 로고
    • Amino acids - Technical production and use
    • Rehm, H.-J., Reed, G. (Eds.). VCH Verlagsgesellschaft mbH, Weinheim, Germany
    • Leuchtenberger, W., 1996. Amino acids - technical production and use. In: Rehm, H.-J., Reed, G. (Eds.), Biotechnology, vol. 6. VCH Verlagsgesellschaft mbH, Weinheim, Germany, pp. 465-502.
    • (1996) Biotechnology , vol.6 , pp. 465-502
    • Leuchtenberger, W.1
  • 12
    • 0030571222 scopus 로고    scopus 로고
    • Pathway analysis, engineering, and physiological considerations for redirecting central metabolism
    • J.C. Liao, S.-Y. Hou, and Y.-P. Chao Pathway analysis, engineering, and physiological considerations for redirecting central metabolism Biotechnology and Bioengineering 52 1996 129 140
    • (1996) Biotechnology and Bioengineering , vol.52 , pp. 129-140
    • Liao, J.C.1    Hou, S.-Y.2    Chao, Y.-P.3
  • 14
    • 0005467961 scopus 로고    scopus 로고
    • Computer aided design of metabolic networks
    • Rawlings, J.,Ogunnaike, T., Eaton, J. (Eds.)
    • Mauch, K., Buziol, S., Schmid, J., Reuss, M., 2002. Computer aided design of metabolic networks. In: Rawlings, J.,Ogunnaike, T., Eaton, J. (Eds.), AIChE Symposium Series, vol. 98. pp. 82-91.
    • (2002) AIChE Symposium Series , vol.98 , pp. 82-91
    • Mauch, K.1    Buziol, S.2    Schmid, J.3    Reuss, M.4
  • 17
    • 0014430315 scopus 로고
    • Amino acid transport systems in Escherichia coli K12
    • J.R. Piperno, and D.L. Oxender Amino acid transport systems in Escherichia coli K12 Journal of Biological Chemistry 243 22 1968 5914 5920
    • (1968) Journal of Biological Chemistry , vol.243 , Issue.22 , pp. 5914-5920
    • Piperno, J.R.1    Oxender, D.L.2
  • 18
    • 0035561009 scopus 로고    scopus 로고
    • Enzyme-catalyzed processes in pharmaceutical industry
    • J.P. Rasor, and E. Voss Enzyme-catalyzed processes in pharmaceutical industry Applied Catalysis A General 221 2001 145 158
    • (2001) Applied Catalysis A: General , vol.221 , pp. 145-158
    • Rasor, J.P.1    Voss, E.2
  • 19
    • 0343907200 scopus 로고    scopus 로고
    • In vivo analysis of metabolic dynamics in Saccharomyces cerevisiae: II. Mathematical model
    • M. Rizzi, M. Baltes, U. Theobald, and M. Reuss In vivo analysis of metabolic dynamics in Saccharomyces cerevisiae II. Mathematical model Biotechnology and Bioengineering 55 1997 592 608
    • (1997) Biotechnology and Bioengineering , vol.55 , pp. 592-608
    • Rizzi, M.1    Baltes, M.2    Theobald, U.3    Reuss, M.4
  • 20
    • 0035852686 scopus 로고    scopus 로고
    • Dynamic regulation of the tryptophan operon: A modeling study and comparison with experimental data
    • Santillan, M., Mackey, M.C., 2001. Dynamic regulation of the tryptophan operon: a modeling study and comparison with experimental data. Proceedings of the National Academy of Science, 98, 1364-1369.
    • (2001) Proceedings of the National Academy of Science , vol.98 , pp. 1364-1369
    • Santillan, M.1    MacKey, M.C.2
  • 21
    • 0033080396 scopus 로고    scopus 로고
    • Detection of elementary flux modes in biochemical networks: A promising tool for pathway analysis and metabolic engineering
    • S. Schuster, T. Dandekar, and D.A. Fell Detection of elementary flux modes in biochemical networks a promising tool for pathway analysis and metabolic engineering TIBTECH 17 1999 53 60
    • (1999) TIBTECH , vol.17 , pp. 53-60
    • Schuster, S.1    Dandekar, T.2    Fell, D.A.3
  • 22
    • 0024278213 scopus 로고
    • Theoretical study of tryptophan operon: Application in microbial technology
    • S. Sinha Theoretical study of tryptophan operon application in microbial technology Biotechnology and Bioengineering 31 1988 117 124
    • (1988) Biotechnology and Bioengineering , vol.31 , pp. 117-124
    • Sinha, S.1
  • 24
    • 0018295216 scopus 로고
    • Hyperproduction of tryptophan by Escherichia coli: Genetic manipulation of the pathways leading to tryptophan formation
    • D.E. Tribe, and J. Pittard Hyperproduction of tryptophan by Escherichia coli genetic manipulation of the pathways leading to tryptophan formation Applied Environmental Microbiology 38 2 1979 181 190
    • (1979) Applied Environmental Microbiology , vol.38 , Issue.2 , pp. 181-190
    • Tribe, D.E.1    Pittard, J.2
  • 25
    • 0027716622 scopus 로고
    • Metabolic capabilities of Escherichia coli: I. Synthesis of biosynthetic precursors and cofactors
    • A. Varma, and B.O. Palsson Metabolic capabilities of Escherichia coli I. Synthesis of biosynthetic precursors and cofactors Journal of Theoretical Biology 165 1993 477 502
    • (1993) Journal of Theoretical Biology , vol.165 , pp. 477-502
    • Varma, A.1    Palsson, B.O.2
  • 26
    • 0027723421 scopus 로고
    • Metabolic capabilities of Escherichia coli: II. Optimal growth pattern
    • A. Varma, and B.O. Palsson Metabolic capabilities of Escherichia coli II. Optimal growth pattern Journal of Theoretical Biology 165 1993 503 522
    • (1993) Journal of Theoretical Biology , vol.165 , pp. 503-522
    • Varma, A.1    Palsson, B.O.2
  • 27
    • 0342762090 scopus 로고    scopus 로고
    • Model analysis concerning the effects of growth rate and intracellular tryptophan level on the stability and dynamics of tryptophan biosynthesis in bacteria
    • Z. Xiu, A. Zeng, and W.-D. Deckwer Model analysis concerning the effects of growth rate and intracellular tryptophan level on the stability and dynamics of tryptophan biosynthesis in bacteria Journal of Biotechnology 58 1997 125 140
    • (1997) Journal of Biotechnology , vol.58 , pp. 125-140
    • Xiu, Z.1    Zeng, A.2    Deckwer, W.-D.3
  • 28
    • 0026006958 scopus 로고
    • Physiological studies of tryptophan transport and tryptophanase operon induction in Escherichia coli
    • C. Yanofsky, V. Horn, and P. Gollnick Physiological studies of tryptophan transport and tryptophanase operon induction in Escherichia coli Journal of Bacteriology 173 1991 6009 6017
    • (1991) Journal of Bacteriology , vol.173 , pp. 6009-6017
    • Yanofsky, C.1    Horn, V.2    Gollnick, P.3


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