-
1
-
-
34447303049
-
Transcriptome changes and cAMP oscillations in an archaeal cell cycle
-
Baumann A, Lange C, Soppa J. 2007. Transcriptome changes and cAMP oscillations in an archaeal cell cycle. BMC Cell Biol 8:21.
-
(2007)
BMC Cell Biol
, vol.8
, pp. 21
-
-
Baumann, A.1
Lange, C.2
Soppa, J.3
-
2
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini Y, Hochberg Y. 1995. Controlling the false discovery rate: A practical and powerful approach to multiple testing. J Roy Stat Soc Ser B (Stat Method) 57(1):289-300.
-
(1995)
J Roy Stat Soc Ser B (Stat Method)
, vol.57
, Issue.1
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
3
-
-
0037162469
-
Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays
-
Bernstein JA, Khodursky AB, Lin P-H, Lin-Chao S, Cohen SN. 2002. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci USA 99(15):9697-9702.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, Issue.15
, pp. 9697-9702
-
-
Bernstein, J.A.1
Khodursky, A.B.2
Lin, P.-H.3
Lin-Chao, S.4
Cohen, S.N.5
-
4
-
-
0019379037
-
The cell cycle in Escherichia coli B/r
-
Bremer H, Chuang L. 1981. The cell cycle in Escherichia coli B/r. J Theor Biol 88:47-80.
-
(1981)
J Theor Biol
, vol.88
, pp. 47-80
-
-
Bremer, H.1
Chuang, L.2
-
5
-
-
0032112293
-
A genome-wide transcriptional analysis of the mitotic cell cycle
-
Cho RJ, Campbell MJ, Winzeler EA, Steinmetz L, Wolfsberg TG, Gabriellian AE, Landsman D, Lockhart DJ, Davis RW. 1998. A genome-wide transcriptional analysis of the mitotic cell cycle. Mol Cell 2(1):65-73.
-
(1998)
Mol Cell
, vol.2
, Issue.1
, pp. 65-73
-
-
Cho, R.J.1
Campbell, M.J.2
Winzeler, E.A.3
Steinmetz, L.4
Wolfsberg, T.G.5
Gabriellian, A.E.6
Landsman, D.7
Lockhart, D.J.8
Davis, R.W.9
-
6
-
-
0035163845
-
Transcriptional regulation and function during the human cell cycle
-
Cho RJ, Huang M, Campbell MJ, Dong H, Steinmetz L, Sapinoso L, Hampton G, Elledge SJ, Davis RW, Lockhart DJ. 2001. Transcriptional regulation and function during the human cell cycle. Nat Genet 27(1): 48-54.
-
(2001)
Nat Genet
, vol.27
, Issue.1
, pp. 48-54
-
-
Cho, R.J.1
Huang, M.2
Campbell, M.J.3
Dong, H.4
Steinmetz, L.5
Sapinoso, L.6
Hampton, G.7
Elledge, S.J.8
Davis, R.W.9
Lockhart, D.J.10
-
7
-
-
38949097057
-
Building a parallel metabolism within the cell. ACS
-
Filipovska A, Rackham O. 2008. Building a parallel metabolism within the cell. ACS Chem Biol 3(1):51-63.
-
(2008)
Chem Biol
, vol.3
, Issue.1
, pp. 51-63
-
-
Filipovska, A.1
Rackham, O.2
-
8
-
-
33846108255
-
Towards synthesis of a minimal cell
-
Article
-
Forster AC, Church GM. 2006. Towards synthesis of a minimal cell. Mol Syst Biol:Article 45.
-
(2006)
Mol Syst Biol
, pp. 45
-
-
Forster, A.C.1
Church, G.M.2
-
9
-
-
0026733965
-
Consequences of replication fork movement through transcription units in vivo
-
French S. 1992. Consequences of replication fork movement through transcription units in vivo. Science 258:1362-1365.
-
(1992)
Science
, vol.258
, pp. 1362-1365
-
-
French, S.1
-
10
-
-
0027176669
-
Transcription of ftsZ oscillates during the cell cycle of Escherichia coli
-
Garrido T, Sanchez M, Palacios P, Aldea M, Vicente M. 1993. Transcription of ftsZ oscillates during the cell cycle of Escherichia coli. EMBO J 12(10):3957-3965.
-
(1993)
EMBO J
, vol.12
, Issue.10
, pp. 3957-3965
-
-
Garrido, T.1
Sanchez, M.2
Palacios, P.3
Aldea, M.4
Vicente, M.5
-
11
-
-
39449112551
-
Complete chemical synthesis, assembly, and cloning of a Mycoplasma genitalium genome
-
Gibson DG, Benders GA, Andrews-Pfannkoch C, Denisova EA, Baden-Tillson H, Zaveri J, Stockwell TB, Brownley A, Thomas DW, Algire MA, Merryman C, Young L, Naskov VN, Glass JI, Venter JC, Hutchison III CA, Smith HO. 2008. Complete chemical synthesis, assembly, and cloning of a Mycoplasma genitalium genome. Science 319:1215-1220.
-
(2008)
Science
, vol.319
, pp. 1215-1220
-
-
Gibson, D.G.1
Benders, G.A.2
Andrews-Pfannkoch, C.3
Denisova, E.A.4
Baden-Tillson, H.5
Zaveri, J.6
Stockwell, T.B.7
Brownley, A.8
Thomas, D.W.9
Algire, M.A.10
Merryman, C.11
Young, L.12
Naskov, V.N.13
Glass, J.I.14
Venter, J.C.15
Hutchison III, C.A.16
Smith, H.O.17
-
12
-
-
0033818954
-
A concise guide to cDNA microarray analysis - II
-
Hegde P, Qi R, Abernathy K, Gay C, Dharap S, Gaspard R, Earle-Hughes J, Snesrud E, Lee N, Quackenbush J. 2000. A concise guide to cDNA microarray analysis - II. BioTechniques 29(3):548-562.
-
(2000)
BioTechniques
, vol.29
, Issue.3
, pp. 548-562
-
-
Hegde, P.1
Qi, R.2
Abernathy, K.3
Gay, C.4
Dharap, S.5
Gaspard, R.6
Earle-Hughes, J.7
Snesrud, E.8
Lee, N.9
Quackenbush, J.10
-
13
-
-
77956834490
-
Methods for studying the microbial division cycle
-
Norris JR, Ribbons DW, editors, London, New York: Academic Press. p
-
Helmstetter CE. 1969. Methods for studying the microbial division cycle. In: Norris JR, Ribbons DW, editors. Methods in microbiology. London, New York: Academic Press. p 327-363.
-
(1969)
Methods in microbiology
, pp. 327-363
-
-
Helmstetter, C.E.1
-
14
-
-
0041695905
-
Synchrony in human, mouse and bacterial cell cycles
-
Helmstetter CE, Thornton M, Romero A, Eward KL. 2003. Synchrony in human, mouse and bacterial cell cycles. Cell Cycle 2:42-45.
-
(2003)
Cell Cycle
, vol.2
, pp. 42-45
-
-
Helmstetter, C.E.1
Thornton, M.2
Romero, A.3
Eward, K.L.4
-
15
-
-
13444262374
-
EcoCyc: A comprehensive database resource for Escherichia coli
-
Keseler IM, Collado-Vides J, Gama-Castro S, Ingraham J, Paley S, Paulsen IT, Peralta-Gil M, Karp PD. 2005. EcoCyc: A comprehensive database resource for Escherichia coli. Nucleic Acids Res 33:D334-D337.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Keseler, I.M.1
Collado-Vides, J.2
Gama-Castro, S.3
Ingraham, J.4
Paley, S.5
Paulsen, I.T.6
Peralta-Gil, M.7
Karp, P.D.8
-
16
-
-
2942614884
-
Programmable cells: Interfacing natural and engineered gene networks
-
Kobayashi H, Kaern M, Araki M, Chung K, Gardner TS, Cantor CR, Collins JJ. 2004. Programmable cells: Interfacing natural and engineered gene networks. Proc Natl Acad Sci USA 101(22):8414-8419.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, Issue.22
, pp. 8414-8419
-
-
Kobayashi, H.1
Kaern, M.2
Araki, M.3
Chung, K.4
Gardner, T.S.5
Cantor, C.R.6
Collins, J.J.7
-
17
-
-
1542272747
-
Comparative genomics, minimal gene sets and the last universal common ancestor
-
Koonin EV. 2003. Comparative genomics, minimal gene sets and the last universal common ancestor. Nat Rev Microbiol 1(2):127 - 136.
-
(2003)
Nat Rev Microbiol
, vol.1
, Issue.2
, pp. 127-136
-
-
Koonin, E.V.1
-
18
-
-
0034671792
-
Global analysis of the genetic network controlling a bacterial cell cycle
-
Laub MT, McAdams HH, Feldblyum T, Fraser CM, Shapiro L. 2000. Global analysis of the genetic network controlling a bacterial cell cycle. Science 290:2144-2148.
-
(2000)
Science
, vol.290
, pp. 2144-2148
-
-
Laub, M.T.1
McAdams, H.H.2
Feldblyum, T.3
Fraser, C.M.4
Shapiro, L.5
-
20
-
-
33847258804
-
Genome-wide transcription map of an archaeal cell cycle
-
Lundgren M, Bernander R. 2007. Genome-wide transcription map of an archaeal cell cycle. Proc Natl Acad Sci USA 104(8):2939-2944.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, Issue.8
, pp. 2939-2944
-
-
Lundgren, M.1
Bernander, R.2
-
21
-
-
24944557141
-
Differential roles of the universal stress proteins of Escherichia coli in oxidative stress resistance, adhesion, and motility
-
Nachin L, Nannmark U, Nyström T. 2005. Differential roles of the universal stress proteins of Escherichia coli in oxidative stress resistance, adhesion, and motility. J Bacteriol 187(18):6265-6272.
-
(2005)
J Bacteriol
, vol.187
, Issue.18
, pp. 6265-6272
-
-
Nachin, L.1
Nannmark, U.2
Nyström, T.3
-
22
-
-
22744437234
-
The cell cycle-regulated genes of Schizosacchar-omyces pombe
-
Oliva A, Rosebrock A, Ferrezuelo F, Pyne S, Chen H, Skiena S, Futcher B, Leatherwood J. 2005. The cell cycle-regulated genes of Schizosacchar-omyces pombe. PLoS Biol 3(7):e225.
-
(2005)
PLoS Biol
, vol.3
, Issue.7
-
-
Oliva, A.1
Rosebrock, A.2
Ferrezuelo, F.3
Pyne, S.4
Chen, H.5
Skiena, S.6
Futcher, B.7
Leatherwood, J.8
-
23
-
-
20044366888
-
Identification of cell cycle-regulated genes in fission yeast
-
Peng X, Karuturi RKM, Miller LD, Lin K, Jia YH, Kondu P, Wang L, Wong LS, Liu ET, Balasubramanian MK, et al. 2005. Identification of cell cycle-regulated genes in fission yeast. Mol Biol Cell 16(3):1026-1042.
-
(2005)
Mol Biol Cell
, vol.16
, Issue.3
, pp. 1026-1042
-
-
Peng, X.1
Karuturi, R.K.M.2
Miller, L.D.3
Lin, K.4
Jia, Y.H.5
Kondu, P.6
Wang, L.7
Wong, L.S.8
Liu, E.T.9
Balasubramanian, M.K.10
-
24
-
-
3242773890
-
Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays
-
Rhee S-K, Liu X, Wu L, Chong SC, Wan X, Zhou J. 2004. Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays. Appl Environ Microbiol 70(7):4303-4317.
-
(2004)
Appl Environ Microbiol
, vol.70
, Issue.7
, pp. 4303-4317
-
-
Rhee, S.-K.1
Liu, X.2
Wu, L.3
Chong, S.C.4
Wan, X.5
Zhou, J.6
-
25
-
-
0003678206
-
-
Washington, DC: Carnegie Institute of Washington
-
Roberts RB, Abelson PH, Cowie DB, Boulton ET, Britten RJ. 1955. Studies of biosynthesis in Escherichia coli. Washington, DC: Carnegie Institute of Washington.
-
(1955)
Studies of biosynthesis in Escherichia coli
-
-
Roberts, R.B.1
Abelson, P.H.2
Cowie, D.B.3
Boulton, E.T.4
Britten, R.J.5
-
26
-
-
0038239283
-
OligoArray 2.0: Design of oligonucleotide probes for DNA microarrays using a thermodynamic approach
-
Rouillard J-M, Zuker M, Gulari E. 2003. OligoArray 2.0: Design of oligonucleotide probes for DNA microarrays using a thermodynamic approach. Nucleic Acids Res 31(12):3057-3062.
-
(2003)
Nucleic Acids Res
, vol.31
, Issue.12
, pp. 3057-3062
-
-
Rouillard, J.-M.1
Zuker, M.2
Gulari, E.3
-
27
-
-
3543042493
-
Periodic gene expression program of the fission yeast cell cycle
-
Rustici G, Mata J, Kivinen K, Lio P, Penkett CJ, Burns G, Hayles J, Brazma A, Nurse P, Bahler J. 2004. Periodic gene expression program of the fission yeast cell cycle. Nat Genet 36(8):809-817.
-
(2004)
Nat Genet
, vol.36
, Issue.8
, pp. 809-817
-
-
Rustici, G.1
Mata, J.2
Kivinen, K.3
Lio, P.4
Penkett, C.J.5
Burns, G.6
Hayles, J.7
Brazma, A.8
Nurse, P.9
Bahler, J.10
-
28
-
-
0038581499
-
Temporal and spatial regulation in prokaryotic cell cycle progression and development
-
Ryan KR, Shapiro L. 2003. Temporal and spatial regulation in prokaryotic cell cycle progression and development. Annu Rev Biochem 72:367-394.
-
(2003)
Annu Rev Biochem
, vol.72
, pp. 367-394
-
-
Ryan, K.R.1
Shapiro, L.2
-
29
-
-
0037315564
-
Global RNA half-life analysis in Escherichia coli reveals positional patterns of transcript degradation
-
Selinger DW, Saxena RM, Cheung KJ, Church GM, Rosenow C. 2003. Global RNA half-life analysis in Escherichia coli reveals positional patterns of transcript degradation. Genome Res 13:216-223.
-
(2003)
Genome Res
, vol.13
, pp. 216-223
-
-
Selinger, D.W.1
Saxena, R.M.2
Cheung, K.J.3
Church, G.M.4
Rosenow, C.5
-
30
-
-
0031909812
-
Cell reproduction and morphological changes in Mycoplasma capricolum
-
Seto S, Miyata M. 1998. Cell reproduction and morphological changes in Mycoplasma capricolum. J Bacteriol 180(2):256-264.
-
(1998)
J Bacteriol
, vol.180
, Issue.2
, pp. 256-264
-
-
Seto, S.1
Miyata, M.2
-
32
-
-
0031742022
-
Comprehensive identification of cell cycle-related genes of the yeast Saccharomyces cervisiae by microarray hybridization
-
Spellman PT, Sherlock G, Zhang MQ, Iyer VR, Anders K, Eisen MB, Brown PO, Botstein D, Futcher B. 1998. Comprehensive identification of cell cycle-related genes of the yeast Saccharomyces cervisiae by microarray hybridization. Mol Biol Cell 9(12):3273-3297.
-
(1998)
Mol Biol Cell
, vol.9
, Issue.12
, pp. 3273-3297
-
-
Spellman, P.T.1
Sherlock, G.2
Zhang, M.Q.3
Iyer, V.R.4
Anders, K.5
Eisen, M.B.6
Brown, P.O.7
Botstein, D.8
Futcher, B.9
-
33
-
-
0027482233
-
Correlation of gene transcription with the time of initiation of chromosome replication in Escherichia coli
-
Theisen PW, Grimwade JE, Leonard AC, Bogan JA, Helmstetter CE. 1993. Correlation of gene transcription with the time of initiation of chromosome replication in Escherichia coli. Mol Microbiol 10(3):575-584.
-
(1993)
Mol Microbiol
, vol.10
, Issue.3
, pp. 575-584
-
-
Theisen, P.W.1
Grimwade, J.E.2
Leonard, A.C.3
Bogan, J.A.4
Helmstetter, C.E.5
-
34
-
-
0035985177
-
Identification of genes periodically expressed in the human cell cycle and their expression in tumors
-
Whitfield ML, Sherlock G, Saldanha AJ, Murray JI, Ball CA, Alexander KE, Matese JC, Perou CM, Hurt MM, Brown PO, et al. 2002. Identification of genes periodically expressed in the human cell cycle and their expression in tumors. Mol Biol Cell 13(6):1977-2000.
-
(2002)
Mol Biol Cell
, vol.13
, Issue.6
, pp. 1977-2000
-
-
Whitfield, M.L.1
Sherlock, G.2
Saldanha, A.J.3
Murray, J.I.4
Ball, C.A.5
Alexander, K.E.6
Matese, J.C.7
Perou, C.M.8
Hurt, M.M.9
Brown, P.O.10
-
35
-
-
0028170164
-
Relationship between ftsZ gene expression and chromosome replication in Escherichia coli
-
Zhou P, Helmstetter CE. 1994. Relationship between ftsZ gene expression and chromosome replication in Escherichia coli. J Bacteriol 176(19): 6100-6106.
-
(1994)
J Bacteriol
, vol.176
, Issue.19
, pp. 6100-6106
-
-
Zhou, P.1
Helmstetter, C.E.2
-
36
-
-
0031037705
-
Gene transcription and chromosome replication in Escherichia coli
-
Zhou P, Bogan JA, Welch K, Pickett SP, Wang H-J, Zaritsky A, Helmstetter CE. 1997. Gene transcription and chromosome replication in Escherichia coli. J Bacteriol 179(1):163-169.
-
(1997)
J Bacteriol
, vol.179
, Issue.1
, pp. 163-169
-
-
Zhou, P.1
Bogan, J.A.2
Welch, K.3
Pickett, S.P.4
Wang, H.-J.5
Zaritsky, A.6
Helmstetter, C.E.7
|