DichroCalc - Circular and linear dichroism online

Bioinformatics

Volumn 25, Issue 4, 2009, Pages 539-540

  Bulheller, Benjamin M ^a   Hirst, Jonathan D ^a  

^a UNIVERSITY OF NOTTINGHAM   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ANALYTIC METHOD; ANALYTICAL PARAMETERS; ARTICLE; CIRCULAR DICHROISM; INFORMATION DISSEMINATION; INFORMATION RETRIEVAL; LINEAR DICHROISM; MATHEMATICAL ANALYSIS; MATHEMATICAL COMPUTING; ONLINE SYSTEM; PRIORITY JOURNAL; SPECTROSCOPY;

CIRCULAR DICHROISM; DATABASES, PROTEIN; INTERNET; PROTEIN CONFORMATION; PROTEIN FOLDING; PROTEINS; SOFTWARE;

EID: 60149110635     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btp016     Document Type: Article

References (12)

1. Ardhammar,M. et al. (2001) Ligand substituents of ruthenium dipyridophenazine complexes sensitively determine orientation in liposome membrane. J. Phys. Chem. B, 105, 11363-11368.
2. Bayley,P.M. et al. (1969) The rotatory properties of molecules containing two peptide groups. J. Phys. Chem., 73, 228-243.
3. Besley,N.A. and Hirst,J.D. (1999) Theoretical studies toward quantitative protein circular dichroism calculations. J. Am. Chem. Soc., 121, 9636-9644.
4. Brooks,B.R. et al. (1983) CHARMM - a program for macromolecular energy, minimization, and dynamics calculations. J. Comput. Chem., 4, 187-217.
5. Bulheller,B.M. et al. (2007) Circular and linear dichroism of proteins. Phys. Chem. Chem. Phys., 9, 2020-2025.
6. Bulheller,B.M. et al. (2008) Charge-transfer transitions in the vacuum-ultraviolet of protein circular dichroism spectra. J. Phys. Chem. B, 112, 1866-1874.
7. Oakley,M.T. and Hirst,J.D. (2006) Charge-transfer transitions in protein circular dichroism calculations. J. Am. Chem. Soc., 128, 12414-12415.
8. Rodger,A. and Nordén,B. (1997) Circular Dichroism & Linear Dichroism. Oxford University Press, Oxford.
9. Rodger,A. et al. (2002) Flow oriented linear dichroism to probe protein orientation in membrane environments. Phys. Chem. Chem. Phys. 4, 4051-4057.
10. Rogers,D.M. and Hirst,J.D. (2003) Ab initio study of aromatic side chains of amino acids in gas phase and solution. J. Phys. Chem. A, 107, 11191-11200. Stajich,J.E. et al. (2002) The BioPerl toolkit: Perl modules for the life sciences. Genome Res., 12 1611-1618.
11. Whitmore,L. and Wallace,B.A. (2004) Dichroweb, an online server for protein secondary structure analyses from circular dichroism spectroscopic data; http://www.cryst.bbk.ac.uk/cdweb. Nucleic Acids Res., 32, W668-W673.
12. 10-helix. J. Chem. Phys., 46, 4927-4945.