메뉴 건너뛰기




Volumn 76, Issue 3, 2009, Pages 253-261

Selective detection of live bacteria combining propidium monoazide sample treatment with microarray technology

Author keywords

Microarray detection; Molecular diagnostics; Propidium monoazide; Quantitative PCR; Viability

Indexed keywords

AZIDE; BACTERIAL DNA; PROPIDIUM MONOAZIDE; UNCLASSIFIED DRUG;

EID: 60049083963     PISSN: 01677012     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mimet.2008.11.004     Document Type: Article
Times cited : (132)

References (19)
  • 1
    • 52049099615 scopus 로고    scopus 로고
    • Selective PCR detection of viable Enterobacter sakazakii cells utilizing propidium monoazide or ethidium bromide monoazide
    • Cawthorn D.M., and Witthuhn R.C. Selective PCR detection of viable Enterobacter sakazakii cells utilizing propidium monoazide or ethidium bromide monoazide. J. Appl. Microbiol. 105 (2008) 1178-1185
    • (2008) J. Appl. Microbiol. , vol.105 , pp. 1178-1185
    • Cawthorn, D.M.1    Witthuhn, R.C.2
  • 2
    • 2942590260 scopus 로고    scopus 로고
    • Establishment of a real-time PCR based approach for accurate quantification of bacterial RNA targets in water, using Salmonella as a model organism
    • Fey A., Eichler S., Flavier Ss., Christen R., Höfle M.G., and Guzmán C.A. Establishment of a real-time PCR based approach for accurate quantification of bacterial RNA targets in water, using Salmonella as a model organism. Appl. Environ. Microbiol. 70 (2004) 3618-3623
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 3618-3623
    • Fey, A.1    Eichler, S.2    Flavier, Ss.3    Christen, R.4    Höfle, M.G.5    Guzmán, C.A.6
  • 3
    • 34249908634 scopus 로고    scopus 로고
    • Insufficient differentiation of live and dead Campylobacter jejuni and Listeria monocytogenes cells by ethidium monoazide (EMA) compromises EMA/real-time PCR
    • Flekna G., Stefanic P., Wagner M., Smulders F.J., Mozina S.S., and Hein I. Insufficient differentiation of live and dead Campylobacter jejuni and Listeria monocytogenes cells by ethidium monoazide (EMA) compromises EMA/real-time PCR. Res. Microbiol. 158 (2007) 405-412
    • (2007) Res. Microbiol. , vol.158 , pp. 405-412
    • Flekna, G.1    Stefanic, P.2    Wagner, M.3    Smulders, F.J.4    Mozina, S.S.5    Hein, I.6
  • 5
    • 0034459932 scopus 로고    scopus 로고
    • Identification of Enterococcus species and phenotypically similar Lactococcus and Vagococcus species by reverse checkerboard hybridization to chaperonin 60 gene sequences
    • Goh S.H., Facklam R.R., Chang M., Hill J.E., Tyrrell G.J., Burns E.C.M., Chan D., He C., Rahim T., Shaw C., and Hemmingsen S.M. Identification of Enterococcus species and phenotypically similar Lactococcus and Vagococcus species by reverse checkerboard hybridization to chaperonin 60 gene sequences. J. Clin. Microbiol. 38 (2000) 3953-3959
    • (2000) J. Clin. Microbiol. , vol.38 , pp. 3953-3959
    • Goh, S.H.1    Facklam, R.R.2    Chang, M.3    Hill, J.E.4    Tyrrell, G.J.5    Burns, E.C.M.6    Chan, D.7    He, C.8    Rahim, T.9    Shaw, C.10    Hemmingsen, S.M.11
  • 7
    • 21744463047 scopus 로고    scopus 로고
    • Rapid and quantitative detection of blood Serratia marcescens by a real-time PCR assay: its clinical application and evaluation in a mouse evaluation in a mouse infection model
    • Iwaya A., Nakagawa S., Iwakura N., Taneike I., Kurihara M., Kuwano T., Gondaira F., Endo M., Hatakeyama K., and Yamamoto T. Rapid and quantitative detection of blood Serratia marcescens by a real-time PCR assay: its clinical application and evaluation in a mouse evaluation in a mouse infection model. FEMS Microbiol. Lett. 248 (2005) 163-170
    • (2005) FEMS Microbiol. Lett. , vol.248 , pp. 163-170
    • Iwaya, A.1    Nakagawa, S.2    Iwakura, N.3    Taneike, I.4    Kurihara, M.5    Kuwano, T.6    Gondaira, F.7    Endo, M.8    Hatakeyama, K.9    Yamamoto, T.10
  • 9
    • 33748746842 scopus 로고    scopus 로고
    • Comparison of propidium monoazide and ethidium monoazide for differentiation of live vs. dead bacteria by selective removal of DNA from dead cells
    • Nocker A., Cheung C.Y., and Camper A.K. Comparison of propidium monoazide and ethidium monoazide for differentiation of live vs. dead bacteria by selective removal of DNA from dead cells. J. Microbiol. Methods 67 (2006) 310-320
    • (2006) J. Microbiol. Methods , vol.67 , pp. 310-320
    • Nocker, A.1    Cheung, C.Y.2    Camper, A.K.3
  • 10
    • 34547599355 scopus 로고    scopus 로고
    • Molecular monitoring of disinfection efficacy
    • Nocker A., Sossa K., and Camper A.K. Molecular monitoring of disinfection efficacy. J. Microbiol. Methods 70 (2007) 252-260
    • (2007) J. Microbiol. Methods , vol.70 , pp. 252-260
    • Nocker, A.1    Sossa, K.2    Camper, A.K.3
  • 11
    • 34548261775 scopus 로고    scopus 로고
    • Use of propidium monoazide for live-dead distinction in microbial ecology
    • Nocker A., Sossa P., Burr M., and Camper A.K. Use of propidium monoazide for live-dead distinction in microbial ecology. Appl. Environ. Microbiol. 73 (2007) 5111-5117
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 5111-5117
    • Nocker, A.1    Sossa, P.2    Burr, M.3    Camper, A.K.4
  • 12
    • 0037390078 scopus 로고    scopus 로고
    • Ethidium monoazide for DNA-based differentiation of viable and dead bacteria by 5′-nuclease
    • Nogva H.K., Dromtorp S.M., Nissen H., and Rudi K. Ethidium monoazide for DNA-based differentiation of viable and dead bacteria by 5′-nuclease. PCR BioTechniques 810 (2003) 804-813
    • (2003) PCR BioTechniques , vol.810 , pp. 804-813
    • Nogva, H.K.1    Dromtorp, S.M.2    Nissen, H.3    Rudi, K.4
  • 13
    • 37349080565 scopus 로고    scopus 로고
    • Enumeration of viable Listeria monocytogenes cells by real-time PCR with propidium monoazide and ethidium monoazide in the presence of dead cells
    • Pan Y., and Breidt Jr. F. Enumeration of viable Listeria monocytogenes cells by real-time PCR with propidium monoazide and ethidium monoazide in the presence of dead cells. Appl. Environ. Microbiol. 73 (2007) 8028-8031
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 8028-8031
    • Pan, Y.1    Breidt Jr., F.2
  • 14
    • 0041919310 scopus 로고    scopus 로고
    • Use of real-time PCR with multiple targets to identify Pseudomonas aeruginosa and other nonfermenting gram-negative bacilli from patients with cystic fibrosis
    • Qin X., Emerson J., Stapp J., Stapp L., Abe P., and Burns J.L. Use of real-time PCR with multiple targets to identify Pseudomonas aeruginosa and other nonfermenting gram-negative bacilli from patients with cystic fibrosis. J. Clin. Microbiol. 41 (2003) 4312-4317
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 4312-4317
    • Qin, X.1    Emerson, J.2    Stapp, J.3    Stapp, L.4    Abe, P.5    Burns, J.L.6
  • 15
    • 13544254304 scopus 로고    scopus 로고
    • Use of ethidium monoazide and PCR in combination for quantification of viable and dead cells in complex samples
    • Rudi K., Moen B., Drømtorp S.M., and Holck A.L. Use of ethidium monoazide and PCR in combination for quantification of viable and dead cells in complex samples. Appl. Environ. Microbiol. 71 (2005) 1018-1024
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 1018-1024
    • Rudi, K.1    Moen, B.2    Drømtorp, S.M.3    Holck, A.L.4
  • 16
    • 16344373263 scopus 로고    scopus 로고
    • Detection of viable and dead Listeria monocytogenes on gouda-like cheeses by real-time PCR
    • Rudi K., Naterstad K., Drømtorp S.M., and Holo H. Detection of viable and dead Listeria monocytogenes on gouda-like cheeses by real-time PCR. Lett. Appl. Microbiol. 40 (2005) 301-306
    • (2005) Lett. Appl. Microbiol. , vol.40 , pp. 301-306
    • Rudi, K.1    Naterstad, K.2    Drømtorp, S.M.3    Holo, H.4
  • 17
    • 0037472216 scopus 로고    scopus 로고
    • Detection of enterohemorrhagic Escherichia coli O157:H7 by using a multiplex real-time PCR assay for genes encoding intimin and Shiga toxins
    • Sharma V.K., and Dean-Nystrom E.A. Detection of enterohemorrhagic Escherichia coli O157:H7 by using a multiplex real-time PCR assay for genes encoding intimin and Shiga toxins. Vet. Microbiol. 93 (2003) 247-260
    • (2003) Vet. Microbiol. , vol.93 , pp. 247-260
    • Sharma, V.K.1    Dean-Nystrom, E.A.2
  • 18
    • 38049016343 scopus 로고    scopus 로고
    • Quantifying fungal viability in air and water samples using quantitative PCR after treatment with propidium monoazide (PMA)
    • Vesper S., McKinstry C., Hartmann C., Neace M., Yoder S., and Vesper A. Quantifying fungal viability in air and water samples using quantitative PCR after treatment with propidium monoazide (PMA). J. Microbiol. Methods 72 (2008) 180-184
    • (2008) J. Microbiol. Methods , vol.72 , pp. 180-184
    • Vesper, S.1    McKinstry, C.2    Hartmann, C.3    Neace, M.4    Yoder, S.5    Vesper, A.6
  • 19
    • 42349085540 scopus 로고    scopus 로고
    • Removal of free extracellular DNA from environmental samples by ethidium monoazide and propidium monoazide
    • Wagner A.O., Malin C., Knapp B.A., and Illmer P. Removal of free extracellular DNA from environmental samples by ethidium monoazide and propidium monoazide. Appl. Environ. Microbiol. 74 (2008) 2537-2539
    • (2008) Appl. Environ. Microbiol. , vol.74 , pp. 2537-2539
    • Wagner, A.O.1    Malin, C.2    Knapp, B.A.3    Illmer, P.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.