Promoter polymorphism in the MS4A2 gene and asthma in the Indian population

International Archives of Allergy and Immunology

Volumn 149, Issue 3, 2009, Pages 208-218

  Sharma, Shilpy ^a   Ghosh, Balaram ^a  

^a CSIR INSTITUTE OF GENOMICS AND INTEGRATIVE BIOLOGY   (India)

Author keywords

Asthma; Fc RI ; MS4A2, promoter polymorphism

Indexed keywords

IMMUNOGLOBULIN E; IMMUNOGLOBULIN E RECEPTOR; MS4A2 PROTEIN, HUMAN;

3' UNTRANSLATED REGION; ADOLESCENT; ADULT; ALLERGIC ASTHMA; ARTICLE; CHILD; CONTROLLED STUDY; DNA POLYMORPHISM; EOSINOPHIL COUNT; FEMALE; GENE; GENETIC ASSOCIATION; GENETIC SUSCEPTIBILITY; GENETIC TRANSCRIPTION; HAPLOTYPE; HUMAN; INDIA; INTRON; MAJOR CLINICAL STUDY; MALE; MS4A2 GENE; PRESCHOOL CHILD; PRIORITY JOURNAL; SCHOOL CHILD; ALLELE; ASTHMA; CASE CONTROL STUDY; EOSINOPHIL; GENE FREQUENCY; GENETIC POLYMORPHISM; GENETIC PREDISPOSITION; GENETICS; GENOTYPE; IMMUNOLOGY; MIDDLE AGED; PROMOTER REGION;

ADOLESCENT; ADULT; ALLELES; ASTHMA; CASE-CONTROL STUDIES; CHILD; CHILD, PRESCHOOL; EOSINOPHILS; FEMALE; GENE FREQUENCY; GENETIC PREDISPOSITION TO DISEASE; GENOTYPE; HAPLOTYPES; HUMANS; INDIA; MALE; MIDDLE AGED; POLYMORPHISM, GENETIC; PROMOTER REGIONS, GENETIC; RECEPTORS, IGE; YOUNG ADULT;

EID: 59849110865     PISSN: 10182438     EISSN: None     Source Type: Journal    
DOI: 10.1159/000199716     Document Type: Article

References (28)

1. Marone G, Poto S, Celestino D, Bonini S: Human basophil releasability. III. Genetic control of human basophil releasability. J Immunol 1986;137:3588-3592.
2. Kinet JP: The high-affinity IgE receptor (Fc epsilon RI): from physiology to pathology. Annu Rev Immunol 1999;17:931-972.
3. Hill MR, Cookson WO: A new variant of the beta subunit of the high-affinity receptor for immunoglobulin E (Fc epsilon RI-beta E237G): associations with measures of atopy and bronchial hyper-responsiveness. Hum
4. Mol Genet 1996; 5: 959-962.
5. Kim YK, Cho SH, Koh YY, Son JW, Lee BJ, Min KU, Kim YY: Linkage between IgE receptor-mediated histamine releasability from basophils and gene marker of chromosome 11q13. J Allergy Clin Immunol 1999; 104:618-622.
6. Kim YK, Oh SY, Oh HB, Chun SY, Cho SH, Koh YY, Min KU, Kim YY: Coding single nucleotide polymorphism in the high-affinity immunoglobulin E receptor b chain (Fc epsilon RI-beta) gene is associated with im- munoglobulin E receptor-mediated hista- mine release from basophils. Clin Exp Allergy 2002;32:751-755.
7. Shirakawa T, Li A, Dubowitz M, Dekker JW, Shaw AE, Faux JA, Ra C, Cookson WO, Hop- kin JM: Association between atopy and variants of the beta subunit of the high-affinity immunoglobulin E receptor. Nat Genet 1994;7:125-129.
8. Kim YK, Park HW, Yang JS, Oh SY, Chang YS, Shin ES, Lee JE, Kim S, Gho YS, Cho SH, Min KU, Kim YY: Association and functional relevance of E237G, a polymorphism of the high-affinity immunoglobulin E-recep- tor beta chain gene, to airway hyper-responsiveness. Clin Exp Allergy 2007;37:592-598.
9. Shirakawa T, Mao XQ, Sasaki S, Enomoto T, Kawai M, Morimoto K, Hopkin J: Association between atopic asthma and a coding variant of Fc epsilon RI beta in a Japanese population. Hum Mol Genet 1996; 5: 1129-1130.
10. Nishiyama C, Akizawa Y, Nishiyama M, Tokura T, Kawada H, Mitsuishi K, Hasegawa M, Ito T, Nakano N, Okamoto A, Takagi A, Yagita H, Okumura K, Ogawa H: Polymorphisms in the Fc epsilon RI beta promoter region affecting transcription activity: a possible promoter-dependent mechanism for association between Fc epsilon RI beta and atopy. J Immunol 2004; 173: 6458-6464.
11. Donnadieu E, Cookson WO, Jouvin MH, Ki- net JP: Allergy-associated polymorphisms of the Fc epsilon RI beta subunit do not impact its two amplification functions. J Immunol 2000;165:3917-3922.
12. Furumoto Y, Hiraoka S, Kawamoto K, Ma- saki S, Kitamura T, Okumura K, Ra C: Polymorphisms in Fc epsilon RI beta chain do not affect IgE-mediated mast cell activation. Biochem Biophys Res Commun 2000; 273: 765-771.
13. Sharma S, Nagarkatti R, Rao C, Niphadkar PV, Vijayan V, Sharma SK, Ghosh B: A-16-C haplotype in the Fc epsilon RIbeta gene confers a higher risk for atopic asthma in the Indian population. Clin Genet 2004;66:417-425.
14. Sharma S, Nagpal K, Mabalirajan U, Kumar A, Ghosh B: Correlation of FCERIB gene haplotypes with histamine release from ba- sophils in atopic asthma. J Allergy Clin Immunol 2006; 118: 960-963.
15. Nagpal K, Sharma S, Rao C, Nahid S, Nip- hadkar PV, Sharma SK, Ghosh B: TGFbeta1 haplotypes and asthma in Indian populations. J Allergy Clin Immunol 2005; 115:527-533.
16. National Asthma Education and Prevention Program Expert Panel Report: Guidelines for the diagnosis and management of asthma update on selected topics: 2002. J Allergy Clin Immunol 2002;110:S141-S219.
17. Laird NM, Horvath S, Xu X: Implementing a unified approach to family-based tests of association. Genet Epidemiol 2000; 19(suppl 1): S36-S42.
18. Rabinowitz D, Laird N: A unified approach to adjusting association tests for population admixture with arbitrary pedigree structure and arbitrary missing marker information. Hum Hered 2000;50:211-223.
19. Abecasis GR, Cardon LR, Cookson WO: A general test of association for quantitative traits in nuclear families. Am J Hum Genet 2000;66: 279-292.
20. Stephens M, Donnelly P: A comparison of bayesian methods for haplotype reconstruction from population genotype data. Am J Hum Genet 2003; 73: 1162-1169.
21. Sham PC, Curtis D: Monte Carlo tests for associations between disease and alleles at highly polymorphic loci. Ann Hum Genet 1995; 59:97-105.
22. Zaboli G, Gizatullin R, Nilsonne A, Wilczek A, Jonsson EG, Ahnemark E, Asberg M, Leopardi R: Tryptophan hydroxylase-1 gene variants associate with a group of suicidal borderline women. Neuropsychopharma-cology 2006; 31: 1982-1990.
23. Zaboli G, Jonsson EG, Gizatullin R, Asberg M, Leopardi R: Tryptophan hydroxylase-1 gene variants associated with schizophrenia. Biol Psychiatry 2006;60:563-569.
24. Hawkins GA, Tantisira K, Meyers DA, Am- pleford EJ, Moore WC, Klanderman B, Liggett SB, Peters SP, Weiss ST, Bleecker ER: Sequence, haplotype, and association analysis of ADRbeta2 in a multiethnic asthma case-control study. Am J Respir Crit Care Med 2006;174:1101-1109.
25. Hizawa N, Maeda Y, Konno S, Fukui Y, Taka- hashi D, Nishimura M: Genetic polymorphisms at FCER1B and PAI-1 and asthma susceptibility. Clin Exp Allergy 2006; 36: 872-876.
26. Hizawa N, Yamaguchi E, Jinushi E, Kawa- kami Y: A common FCER1B gene promoter polymorphism influences total serum IgE levels in a Japanese population. Am J Respir Crit Care Med 2000; 161: 906-909.
27. Kim SH, Bae JS, Holloway JW, Lee JT, Suh CH, Nahm DH, Park HS: A polymorphism of MS4A2 (-109T>C) encoding the beta- chain of the high-affinity immunoglobulin E receptor (Fc epsilon R1beta) is associated with a susceptibility to aspirin-intolerant asthma. Clin Exp Allergy 2006;36:877-883.
28. Traherne JA, Hill MR, Hysi P, D'Amato M, Broxholme J, Mott R, Moffatt MF, Cookson WO: LD mapping of maternally and non- maternally derived alleles and atopy in Fc ep-silon RI-beta. Hum Mol Genet 2003; 12: 2577-2585.