Time-resolved FTIR study of CO recombination with horseradish peroxidase

Biochemical Society Transactions

Volumn 36, Issue 6, 2008, Pages 1165-1168

  Maréchal, Amandine ^a   Ingledew, W John ^b   Rich, Peter R ^a  

^a UNIVERSITY COLLEGE LONDON   (United Kingdom)

^b UNIVERSITY OF ST ANDREWS   (United Kingdom)

Author keywords

Carbon monoxide; Fourier transform infrared spectroscopy (FTIR spectroscopy); Horseradish peroxidase; Rapid scan; Time resolved spectroscopy

Indexed keywords

CARBON MONOXIDE; FERROUS ION; HEME; HORSERADISH PEROXIDASE; IRON;

ARTICLE; BINDING AFFINITY; BINDING KINETICS; BINDING SITE; CHEMICAL REACTION; CONFORMATION; ENZYME BINDING; ENZYME SUBSTRATE; INFRARED SPECTROSCOPY; PH; PHOTOLYSIS; PRIORITY JOURNAL; PROTEIN STRUCTURE; THERMOSTABILITY; VIBRATION; KINETICS; LASER; METABOLISM; TIME;

ARMORACIA RUSTICANA;

CARBON MONOXIDE; HORSERADISH PEROXIDASE; IRON; KINETICS; LASERS; PHOTOLYSIS; SPECTROSCOPY, FOURIER TRANSFORM INFRARED; TIME FACTORS; VIBRATION;

EID: 59049108330     PISSN: 03005127     EISSN: 14708752     Source Type: Journal    
DOI: 10.1042/BST0361165     Document Type: Article

References (20)

1. Gajhede, M., Schuller, D.J., Henriksen, A., Smith, A.T. and Poulos, T.L. (1997) Crystal structure of horseradish peroxidase C at 2.15 Å resolution. Nat. Struct. Biol. 4, 1032-1038
2. Berglund, G.I., Carlsson, G.H., Smith, A.T., Szöke, H., Henriksen, A. and Hajdu, J. (2002) The catalytic pathway of horseradish peroxidase at high resolution. Nature 417, 463-468
3. Carlsson, G.H., Nicholls, P., Svistunenko, D.A., Berglund, G.I. and Hajdu, J. (2005) Complexes of horseradish peroxidase with formate, acetate and carbon monoxide. Biochemistry 44, 635-642
4. Meunier, B., Rodriguez-Lopez, J.N., Smith, A.T., Thorneley, R.N.F. and Rich, P.R. (1998) Redox- and anion-linked protonation sites in horseradish peroxidase: analysis of distal haem pocket mutants. Biochem. J. 330, 303-309
5. Barlow, C.H., Ohlsson, P.-I. and Paul, K.-G. (1976) Infrared spectroscopic studies of carbonyl horseradish peroxidases. Biochemistry 15, 2225-2229
6. 38 ← Leu mutants. J. Biol. Inorg. Chem. 3, 44-52
7. Ingledew, W.J. and Rich, P.R. (2005) A study of the horseradish peroxidase catalytic site by FTIR spectroscopy. Biochem. Soc. Trans. 33, 886-889
8. 38 ← Leu mutants. Biochemistry 37, 13575-13581
9. Dalosto, S.D., Prabhu, N.V., Vanderkooi, J.M. and Sharp, K.A. (2008) A density functional theory study of conformers in the ferrous CO complex of horseradish peroxidase with distinct Fe-C-O configurations. J. Phys. Chem. B 107, 1884-1892
10. Braiman, M.S., Ahl, P.L. and Rothschild, K.J. (1987) Millisecond Fourier-transform infrared difference spectra of bacteriorhodopsin's M412 photoproduct. Proc. Natl. Acad. Sci. U.S.A. 84, 5221-5225
11. Uhmann, W., Becker, A., Taran, C. and Siebert, F. (1991) Time-resolved FT-IR absorption spectroscopy using a step-scan interferometer. Appl. Spectrosc. 45, 390-397
12. Johnson, T.J., Simon, A., Weil, J.M. and Harris, G.W. (1993) Applications of time-resolved step-scan and rapid-scan FT-IR spectroscopy: dynamics from ten seconds to ten nanoseconds. Appl. Spectrosc. 47, 1376-1381
13. Kertesz, D., Antonini, E., Brunori, M., Wyman, J. and Zito, R. (1965) Studies of the equilibria and kinetics of the reaction of peroxidases with ligands. I. The reaction of ferroperoxidases with carbon monoxide. Biochemistry 4, 2672-2676
14. Coletta, M., Ascoli, F., Brunori, M. and Traylor, T.G. (1986) pH dependence of carbon monoxide binding to ferrous horseradish peroxidase. J. Biol. Chem. 261, 9811-9814
15. Meunier, B. and Rich, P.R. (1997) Photolysis of the cyanide adduct of the ferrous horseradish peroxidase. Biochim. Biophys. Acta 1318, 235-245
16. Ansari, A., Berendzen, J., Braunstein, D., Cowen, B.R., Frauenfelder, H., Hong, M.K., Iben, I.E.T., Johnson, J.B., Ormos, P., Sauke, T.B. et al. (1987) Rebinding and relaxation in the heme pocket. Biophys. Chem. 26, 337-355
17. Mourant, J.R., Braunstein, D.P., Chu, K., Frauenfelder, H., Nienhaus, G.U., Ormos, P. and Young, R.D. (1993) Ligand binding to heme proteins. II. Transitions in the heme pocket of myoglobin. Biophys. J. 65, 1496-1507
18. Jung, C., Stuehr, D.J. and Ghosh, D.K. (2000) FT-infrared spectroscopic studies of the iron ligand CO stretch mode of iNOS oxygenase domain: effect of arginine and tetrahydrobiopterin. Biochemistry 39, 10163-10171
19. Koutsoupakis, C., Soulimane, T. and Varotsis, C. (2003) Ligand binding in a docking site of cytochrome c oxidase: a time-resolved step-scan Fourier transform infrared study. J. Am. Chem. Soc. 125, 14728-14732
20. Ingledew, W.J., Smith, S.M.E., Gao, Y.T., Jones, R.J., Salerno, J.C. and Rich, P.R. (2005) Ligand, cofactor, and residue vibrations in the catalytic site of endothelial nitric oxide synthase. Biochemistry 44, 4238-4246