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Volumn 90, Issue C, 2008, Pages 417-434

Chapter 18 THz Investigations of Condensed Phase Biomolecular Systems

Author keywords

[No Author keywords available]

Indexed keywords

DIPEPTIDE; NANOTUBE; WATER;

EID: 59049086198     PISSN: 0091679X     EISSN: None     Source Type: Book Series    
DOI: 10.1016/S0091-679X(08)00818-2     Document Type: Review
Times cited : (5)

References (41)
  • 1
    • 0001518274 scopus 로고    scopus 로고
    • The effect of hydrophobic and hydrophilic channel walls on the structure and diffusion of water and ions
    • Allen T.W., Kuyucak S., and Chung S.H. The effect of hydrophobic and hydrophilic channel walls on the structure and diffusion of water and ions. J. Chem. Phys. 111 (1999) 7985-7999
    • (1999) J. Chem. Phys. , vol.111 , pp. 7985-7999
    • Allen, T.W.1    Kuyucak, S.2    Chung, S.H.3
  • 2
    • 34248669575 scopus 로고    scopus 로고
    • Assignment of the lowest-lying THz absorption signatures in biotin and lactose monohydrate by sold-state density functional theory
    • Allis D.G., Fedor A.M., Korter T.M., Bjarnason J.E., and Brown E.R. Assignment of the lowest-lying THz absorption signatures in biotin and lactose monohydrate by sold-state density functional theory. Chem. Phys. Lett. 440 (2007) 203-209
    • (2007) Chem. Phys. Lett. , vol.440 , pp. 203-209
    • Allis, D.G.1    Fedor, A.M.2    Korter, T.M.3    Bjarnason, J.E.4    Brown, E.R.5
  • 3
    • 33748573642 scopus 로고    scopus 로고
    • The influence of geometry, surface character, and flexibility on the permeation of ions and water through biological pores
    • Beckstein O., and Sansom M.S.P. The influence of geometry, surface character, and flexibility on the permeation of ions and water through biological pores. Phys. Biol. 1 (2004) 42-52
    • (2004) Phys. Biol. , vol.1 , pp. 42-52
    • Beckstein, O.1    Sansom, M.S.P.2
  • 5
    • 0035861454 scopus 로고    scopus 로고
    • Water permeation across biological membranes: Mechanism and dynamics of aquaporin-1 and GlpF
    • De Groot B.L., and Grubmuller H. Water permeation across biological membranes: Mechanism and dynamics of aquaporin-1 and GlpF. Science 294 (2001) 2353-2357
    • (2001) Science , vol.294 , pp. 2353-2357
    • De Groot, B.L.1    Grubmuller, H.2
  • 6
    • 34447260582 scopus 로고
    • An all-electron numerical method for solving the local density functional for polyatomic molecules
    • Delley B. An all-electron numerical method for solving the local density functional for polyatomic molecules. J. Chem. Phys. 92 (1990) 508
    • (1990) J. Chem. Phys. , vol.92 , pp. 508
    • Delley, B.1
  • 10
    • 84977266737 scopus 로고
    • Die Berechnung opticher und elektrostatischer Gotterpotentiale (Evaluation of optical and electrostatic lattice potentials)
    • Ewald P. Die Berechnung opticher und elektrostatischer Gotterpotentiale (Evaluation of optical and electrostatic lattice potentials). Ann. Phys. 64 (1921) 253-287
    • (1921) Ann. Phys. , vol.64 , pp. 253-287
    • Ewald, P.1
  • 11
    • 19044400920 scopus 로고    scopus 로고
    • An exceptionally stable peptide nanotube system with flexible pores
    • Görbitz C.H. An exceptionally stable peptide nanotube system with flexible pores. Acta Crystallogr. B58 (2002) 849-854
    • (2002) Acta Crystallogr. , vol.B58 , pp. 849-854
    • Görbitz, C.H.1
  • 12
    • 1642538387 scopus 로고    scopus 로고
    • Nanotubes from hydrophobic dipeptides: Pore size regulation through side chain substitution
    • Gorbitz C.H. Nanotubes from hydrophobic dipeptides: Pore size regulation through side chain substitution. New J. Chem. 27 (2003) 1789-1793
    • (2003) New J. Chem. , vol.27 , pp. 1789-1793
    • Gorbitz, C.H.1
  • 14
    • 0037136808 scopus 로고    scopus 로고
    • Ab initio and improved empirical potentials for the calculation of the anharmonic vibrational states and intramolecular mode coupling of n-methylacetamide
    • Gregurick S.K., Chaban G.M., and Gerber R.B. Ab initio and improved empirical potentials for the calculation of the anharmonic vibrational states and intramolecular mode coupling of n-methylacetamide. J. Phys. Chem. A 106 (2002) 8696-8707
    • (2002) J. Phys. Chem. A , vol.106 , pp. 8696-8707
    • Gregurick, S.K.1    Chaban, G.M.2    Gerber, R.B.3
  • 15
    • 0031246784 scopus 로고    scopus 로고
    • Vibrational spectroscopy of peptides and peptide-water cmplexes: Anharmonic coupled-mode calculations
    • Gregurick S.K., Fredj E., Elber R., and Gerber R.B. Vibrational spectroscopy of peptides and peptide-water cmplexes: Anharmonic coupled-mode calculations. J. Phys. Chem. B 101 (1997) 8595-8606
    • (1997) J. Phys. Chem. B , vol.101 , pp. 8595-8606
    • Gregurick, S.K.1    Fredj, E.2    Elber, R.3    Gerber, R.B.4
  • 16
    • 0001109647 scopus 로고    scopus 로고
    • Anharmonic vibrational self-consistent field calculations as an approach to improving force fields for monosaccharides
    • Gregurick S.K., Liu J.H.-Y., Brant D.A., and Gerber R.B. Anharmonic vibrational self-consistent field calculations as an approach to improving force fields for monosaccharides. J. Phys. Chem. B 103 (1999) 3476-3488
    • (1999) J. Phys. Chem. B , vol.103 , pp. 3476-3488
    • Gregurick, S.K.1    Liu, J.H.-Y.2    Brant, D.A.3    Gerber, R.B.4
  • 18
    • 42649140251 scopus 로고    scopus 로고
    • Long-range influence of carbohydrates on the salvation dynamics of water-Answers from terahertz absorption measurements and molecular modeling simulations
    • Heyden M., Brundermann E., Heugen U., Niehues G., Leitner D.M., and Havenith M. Long-range influence of carbohydrates on the salvation dynamics of water-Answers from terahertz absorption measurements and molecular modeling simulations. J. Am. Chem. Soc. 130 (2008) 5773-5779
    • (2008) J. Am. Chem. Soc. , vol.130 , pp. 5773-5779
    • Heyden, M.1    Brundermann, E.2    Heugen, U.3    Niehues, G.4    Leitner, D.M.5    Havenith, M.6
  • 19
    • 0035829539 scopus 로고    scopus 로고
    • Water conduction through the hydrophobic channel of a carbon nanotube
    • Hummer G., Rasaiah J.C., and Noworyta J.P. Water conduction through the hydrophobic channel of a carbon nanotube. Nature 414 (2001) 188-190
    • (2001) Nature , vol.414 , pp. 188-190
    • Hummer, G.1    Rasaiah, J.C.2    Noworyta, J.P.3
  • 20
    • 34347355359 scopus 로고    scopus 로고
    • Precise ab-initio prediction of Terahertz vibrational modes in crystalline systems
    • Jepsen P.U., and Clark S.J. Precise ab-initio prediction of Terahertz vibrational modes in crystalline systems. Chem. Phys. Lett. 442 (2007) 275-280
    • (2007) Chem. Phys. Lett. , vol.442 , pp. 275-280
    • Jepsen, P.U.1    Clark, S.J.2
  • 21
    • 1642431820 scopus 로고    scopus 로고
    • Continuous-wave terahertz spectroscopy of biotin: Vibrational anharmonicity in the far-infrared
    • Korter T.M., and Plusquellic D.F. Continuous-wave terahertz spectroscopy of biotin: Vibrational anharmonicity in the far-infrared. Chem. Phys. Lett. 385 (2004) 45
    • (2004) Chem. Phys. Lett. , vol.385 , pp. 45
    • Korter, T.M.1    Plusquellic, D.F.2
  • 22
    • 0007165005 scopus 로고    scopus 로고
    • Mobility and salvation of ions in channels
    • Lynden-Bell R.M., and Rasaiah J.C. Mobility and salvation of ions in channels. J. Chem. Phys. 105 (1996) 9266-9280
    • (1996) J. Chem. Phys. , vol.105 , pp. 9266-9280
    • Lynden-Bell, R.M.1    Rasaiah, J.C.2
  • 23
    • 0242593434 scopus 로고    scopus 로고
    • Development and current status of the CHARMM force field for nucleic acids
    • MacKerell A.D., Banavali N., and Foloppe N. Development and current status of the CHARMM force field for nucleic acids. Biopolymers 56 (2000) 257
    • (2000) Biopolymers , vol.56 , pp. 257
    • MacKerell, A.D.1    Banavali, N.2    Foloppe, N.3
  • 26
    • 33645498526 scopus 로고    scopus 로고
    • Ionic contrast terahertz near-field imaging of axonal water fluxes
    • Masson J.B., Sauviat M.P., Martin J.L., and Gallot G. Ionic contrast terahertz near-field imaging of axonal water fluxes. Proc. Natl. Acad. Sci. 103 (2006) 4808-4812
    • (2006) Proc. Natl. Acad. Sci. , vol.103 , pp. 4808-4812
    • Masson, J.B.1    Sauviat, M.P.2    Martin, J.L.3    Gallot, G.4
  • 28
    • 36048932382 scopus 로고    scopus 로고
    • High-resolution waveguide terahertz spectroscopy of partially oriented organic polycrystalline films
    • Melinger J.S., Laman N., Sree Harsha S., Cheng S., and Grischkowsky D. High-resolution waveguide terahertz spectroscopy of partially oriented organic polycrystalline films. J. Phys. Chem. A 111 (2007) 10977-10987
    • (2007) J. Phys. Chem. A , vol.111 , pp. 10977-10987
    • Melinger, J.S.1    Laman, N.2    Sree Harsha, S.3    Cheng, S.4    Grischkowsky, D.5
  • 29
    • 33845955962 scopus 로고    scopus 로고
    • Line narrowing of terahertz vibrational modes for organic thin polycrystalline films within a parallel plate waveguide
    • Melinger J.S., Laman N., Sree Harsha S., and Grischkowsky D. Line narrowing of terahertz vibrational modes for organic thin polycrystalline films within a parallel plate waveguide. Appl. Phys. Lett. 89 (2006) 251110
    • (2006) Appl. Phys. Lett. , vol.89 , pp. 251110
    • Melinger, J.S.1    Laman, N.2    Sree Harsha, S.3    Grischkowsky, D.4
  • 30
    • 0000858481 scopus 로고    scopus 로고
    • Undistorted guided-wave propagation of sub-picosecond terahertz pulses
    • Mendis R., and Grischkowsky D. Undistorted guided-wave propagation of sub-picosecond terahertz pulses. Opt. Lett. 26 (2001) 846-848
    • (2001) Opt. Lett. , vol.26 , pp. 846-848
    • Mendis, R.1    Grischkowsky, D.2
  • 34
    • 0031862465 scopus 로고    scopus 로고
    • Free energy profiles for H+ conduction along hydrogen-bonded chains of water molecules
    • Pomes R., and Roux B. Free energy profiles for H+ conduction along hydrogen-bonded chains of water molecules. Biophys. J. 75 (1998) 33-40
    • (1998) Biophys. J. , vol.75 , pp. 33-40
    • Pomes, R.1    Roux, B.2
  • 35
    • 0026503030 scopus 로고
    • Appearance of water channels in Xenopus oocytes expressing red cell CHIP28 protein
    • Preston G.M., Carroll T.P., Guggino W.B., and Agre P. Appearance of water channels in Xenopus oocytes expressing red cell CHIP28 protein. Science 256 (1992) 385-387
    • (1992) Science , vol.256 , pp. 385-387
    • Preston, G.M.1    Carroll, T.P.2    Guggino, W.B.3    Agre, P.4
  • 36
    • 0030777710 scopus 로고    scopus 로고
    • The dielectric properties of water within model transbilayer pores
    • Sansom M.S.P., Smith G.R., Adcock C., and Biggin P.C. The dielectric properties of water within model transbilayer pores. Biophys. J. 73 (1997) 2404-2415
    • (1997) Biophys. J. , vol.73 , pp. 2404-2415
    • Sansom, M.S.P.1    Smith, G.R.2    Adcock, C.3    Biggin, P.C.4
  • 37
    • 33646595338 scopus 로고    scopus 로고
    • High resolution Terahertz spectroscopy of crystalline trialanine: Extreme sensitivity to β-sheet structure and cocrystallized water
    • Siegrist K., Bucher C.R., Mandelbaum I., Hight-Walker A., Balu A.R.R., Gregurick R.S.K., and Plusquellic D.F. High resolution Terahertz spectroscopy of crystalline trialanine: Extreme sensitivity to β-sheet structure and cocrystallized water. J. Am. Chem. Soc. 128 (2006) 5764-5775
    • (2006) J. Am. Chem. Soc. , vol.128 , pp. 5764-5775
    • Siegrist, K.1    Bucher, C.R.2    Mandelbaum, I.3    Hight-Walker, A.4    Balu, A.R.R.5    Gregurick, R.S.K.6    Plusquellic, D.F.7
  • 39
    • 0041843665 scopus 로고    scopus 로고
    • Protein flexibility and conformational state: A comparison of collective vibrational modes of wild-type and D96N bacteriorhodopsin
    • Whitmire S.E., Wolpert D., Markelz A.G., Hillebrecht J.R., Galan J., and Birge R.R. Protein flexibility and conformational state: A comparison of collective vibrational modes of wild-type and D96N bacteriorhodopsin. Biophys. J. (2003) 1269-1277
    • (2003) Biophys. J. , pp. 1269-1277
    • Whitmire, S.E.1    Wolpert, D.2    Markelz, A.G.3    Hillebrecht, J.R.4    Galan, J.5    Birge, R.R.6


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