An extended dynamical hydration shell around proteins

Proceedings of the National Academy of Sciences of the United States of America

Volumn 104, Issue 52, 2007, Pages 20749-20752

  Ebbinghaus, Simon ^a   Seung, Joong Kim ^b   Heyden, Matthias ^a   Yu, Xin ^d   Heugen, Udo ^a   Gruebele, Martin ^b,c   Leitner, David M ^d   Havenith, Martina ^a  

^a RUHR UNIVERSITY BOCHUM   (Germany)

^b University of Illinois at Urbana Champaign   (United States)

^c UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN   (United States)

^d UNIVERSITY OF NEVADA   (United States)

Author keywords

Lambda repressor; Molecular modeling; Solvation dynamics; THz spectroscopy

Indexed keywords

ARTICLE; CONCENTRATION (PARAMETERS); CONCENTRATION RESPONSE; ENERGY TRANSFER; HYDRATION; MOLECULAR DYNAMICS; MOLECULAR MODEL; PRIORITY JOURNAL; PROTEIN FOLDING; PROTEIN STRUCTURE; SOLVATION;

BIOCHEMISTRY; DNA-BINDING PROTEINS; ESCHERICHIA COLI; HYDROGEN BONDING; MODELS, MOLECULAR; MODELS, STATISTICAL; MUTATION; PROTEIN CONFORMATION; PROTEIN FOLDING; PROTEINS; REPRESSOR PROTEINS; SOLVENTS; SPECTROPHOTOMETRY; TEMPERATURE; VIRAL REGULATORY AND ACCESSORY PROTEINS; WATER;

EID: 38049115489     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0709207104     Document Type: Article

References (25)

1. Ansari A, Berendzen J, Bowne SF, Frauenfelder H, Iben IET, Sauke TB, Shyamsunder E, Young RD (1985) Proc Natl Acad Sci USA 82:5000-5004.
2. Despa F, Fernández A, Berry RS (2004) Phys Rev Lett 93:228104.
3. Burling FT, Weis WI, Flaherty KM, Brunger AT (1996) Science 271:72-77.
4. Collins M, Hummer G, Quillin ML, Matthews BW, Gruner SM (2005) Proc Natl Acad Sci USA 102:16668-16671.
5. Grant EH, Sheppard RJ, South GP (1978) Dielectric Behaviour of Biological Molecules in Solution (Clarendon, Oxford).
6. Chen J-Y, Knab JR, Cerne J, Markelz AG (2005) Phys Rev E 72:040901.
7. Siegrist K, Bucher CR, Mandelbaum I, Walker AR, Balu R, Gregurick SK, Plusquellic DF (2006) J Am Chem Soc 128:5764-5775.
8. Zanotti JM, Bellissent-Funel MC, Parello J (1999) Biophys J 76:2390-2411.
9. Hochstrasser RM (2005) Nature 434:570-571.
10. Zhong DP, Pal SK, Zhang DQ, Chan SI, Zewail AH (2002) Proc Natl Acad Sci USA 99:13-18.
11. Heugen U, Schwaab G, Bründermann E, Heyden M, Yu X, Leitner DM, Havenith M (2006) Proc Natl Acad Sci USA 103:12301-12306.
12. Rösgen J, Pettitt BM, Bolen DW (2005) Biophys J 89:2988-2997.
13. Beard MC, Turner GM, Schmuttenmaer CA (2002) J Phys Chem B 106:7146-7159.
14. Bergner A, Heugen U, Bründermann E, Schwaab G, Havenith M, Chamberlin DR, Haller EE (2005) Rev Sci Inst 76:063110(1)-063110(5).
15. Xu J, Plaxco KW, Allen SJ (2006) Prot Sci 15:1175-1181.
16. Yang WY, Gruebele M (2003) Nature 423:193-197.
17. Dumont C, Matsumura Y, Kim SJ, Li J, Kondrashkina E, Kihara H, Gruebele M (2006) Protein Sci 5:2596-2604.
18. van Gunsteren WF, Daura X, Mark AE (1998) in Encyclopaedia of Computational Chemistry (Wiley, London) Vol. 2, pp 1211-1216.
19. Rønne C, Thrane L, Åstrand P-O, Wallqvist A, Mikkelsen KV, Keiding SR (1997) J Chem Phys 107:5319-5331.
20. Fischer H, Polikarpov I, Craievich AF (2004) Protein Sci 13:2825-2828.
21. Weingärtner H (1985-1996) in Ullmann's Encyclopedia of Industrial and Technical Chemistry (Wiley-VCH, Weinheim) Vol A28, pp 4-19.
22. Makarov VA, Feig M, Andrews BK, Pettitt BM (1998) Biophys J 75:150-158.
23. Leitner DM, Havenith M, Gruebele M (2006) Int Rev Phys Chem 25:553-582.
24. Svergun D, Richard S, Koch MHJ, Sayers Z, Kuprin S, Zaccai G (1998) Proc Natl Acad Sci USA 95:2267-2272.
25. Merzel F, Smith JC (2002) Proc Natl Acad Sci USA 99:5378-5383.