Development of nine polymorphic microsatellite markers for the phytoparasitic nematode Xiphinema index, the vector of the grapevine fanleaf virus

Molecular Ecology Resources

Volumn 9, Issue 1, 2009, Pages 229-232

  Villate, L ^a,c   Esmenjaud, D ^a   Coedel, S ^d   Plantard, O ^b,c  

^a CEMAGREF   (France)

^b LUNAM UNIVERSITÉ   (France)

^c UNIVERSITÉ DE RENNES 1   (France)

^d Parc Scientifique de Luminy   (France)

Author keywords

Cross priming; Dagger nematode; Enriched library; GFLV; M13 tail; Vitis vinifera

Indexed keywords

GRAPEVINE FANLEAF VIRUS; NEMATODA; VITACEAE; VITIS VINIFERA; XIPHINEMA; XIPHINEMA INDEX;

EID: 58949087251     PISSN: 1755098X     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1755-0998.2008.02411.x     Document Type: Article

References (16)

1. Balloux F, Lehmann L, de Meeus T (2003) The population genetics of clonal and partially clonal diploids. Genetics, 164, 1635 1644.
2. Dalmasso A, Younes T (1969) Ovogenesis and embryogenesis in Xiphinema index (Nematoda: Dorylaimida). Annales de Zoologie et Ecologie Animale, 1, 265 272.
3. De Meeus T, Lehmann L, Balloux F (2006) Molecular epidemiology of clonal diploids: a quick overview and a short DIY (do it yourself) notice. Infection Genetics and Evolution, 6, 163 170.
4. Esmenjaud D (2000) Les nématodes de la vigne. In : Ravageurs de la Vigne (ed. Féret E pp. 17 29. J. Stockel, Bordeaux, France.
5. Floyd R, Abebe E, Papert A, Blaxter M (2002) Molecular barcodes for soil nematode identification. Molecular Ecology, 11, 839 850.
6. Glenn TC, Schable NA (2005) Isolating microsatellite DNA loci. Molecular Evolution: Producing the Biochemical Data, Part B, 395, 202 222.
7. Goudet J (2001) fstat, A Program to Estimate and Test Gene Diversities and Fixation Indices (version 2.9.3). Available from URL: http://www.unil.ch/ izea/softwares/fstat.html.
8. He Y, Li HM, Brown DJF, Lamberti F, Moens M (2003) Isolation and characterisation of microsatellites for Xiphinema index using degenerate oligonucleotide primed PCR. Nematology, 5, 809 819.
9. Hewitt WB, Raski DJ, Goheen AC (1958) Nematode vector of soil-borne fanleaf virus of grapevines. Phytopathology, 48, 586 595.
10. Ibrahim SK, Perry RN, Burrows PR, Hooper DJ (1994) Differentiation of species and populations of Aphelenchoides and of Ditylenchus angustus using a fragment of ribosomal DNA. Journal of Nematology, 26, 412 421.
11. Rozen S, Skaletsky HJ (2000) Primer 3 on the WWW for general users and for biologist. In : Bioinformatics Methods and Protocols: Methods in Molecular Biology (eds Krawetz S, Misener S pp. 365 386. Humana Press, Totowa, New Jersey.
12. Schuelke M (2000) An economic method for the fluorescent labeling of PCR fragments. Nature Biotechnology, 18, 233 234.
13. Stanton JM, McNicol CD, Steele V (1998) Non-manual lysis of second-stage Meloidogyne juveniles for identification of pure and mixed samples based on the polymerase chain reaction. Australasian Plant Pathology, 27, 112 115.
14. Taylor CE, Brown DJF (1997) Nematode Vectors of Plant Viruses. CAB International, Wallingford, UK.
15. Wang XR, Bosselut N, Castagnone C et al 2003) Multiplex polymerase chain reaction identification of single individuals of the Longidorid nematodes Xiphinema index, X. diversicaudatum, X. vuittenezi, and X. italiae using specific primers from ribosomal genes. Phytopathology, 93, 160 166.
16. Wang XR, Bosselut N, Reynal B et al 2002) PCR identification of single individuals of the longidorid nematodes Xiphinema index, X. diversicaudatum and X. vuittenezi using specific primers from ribosomal genes. Nematology, 4, 627 627.