Detection and identification of enteroviruses from various drinking water sources in Taiwan

Journal of Hydrology

Volumn 365, Issue 1-2, 2009, Pages 134-139

  Hsu, Bing Mu ^a   Chen, Chien Hsien ^b   Wan, Min Tao ^b   Chang, Po Jen ^b   Fan, Cheng Wei ^a  

^a NATIONAL CHUNG CHENG UNIVERSITY   (Taiwan)

^b TATUNG UNIVERSITY   (Taiwan)

Author keywords

Coxsackievirus; Enteroviruses; EV 71; Real time PCR; RT PCR

Indexed keywords

COSMIC RAYS; GROUNDWATER; HYDROGEOLOGY; NUCLEIC ACIDS; POTABLE WATER; RESERVOIRS (WATER); SURFACE TREATMENT; SURFACE WATERS; UNDERGROUND RESERVOIRS; WATER TREATMENT;

COXSACKIEVIRUS; ENTEROVIRUSES; EV 71; REAL-TIME PCR; RT-PCR;

NEURAL NETWORKS;

CONCENTRATION (COMPOSITION); DRINKING WATER; NUCLEIC ACID; RESERVOIR; SURFACE WATER; VIRUS; WATER QUALITY; WATER RESOURCE;

ASIA; EURASIA; FAR EAST; TAIWAN;

COXSACKIEVIRUS; ENTEROVIRUS; HUMAN ENTEROVIRUS 71;

EID: 58749096504     PISSN: 00221694     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jhydrol.2008.11.032     Document Type: Article

References (53)

1. Abbaszadegan M., Stewart P., and LeChevallier M. A strategy for the detection of viruses in groundwater by PCR. Appl. Environ. Microbiol. 65 (1999) 444-449
2. APHA, 1995. Standard Method for the Examination of Water and Wastewater, 15th ed., Washington, DC.
3. Bendig J.W.A., O'Brien P.S., Muir P., Porter H.J., and Caul E.O. Enterovirus sequences resembling coxsackievirus A2 detected in stool and spleen from a girl with fatal myocarditis. J. Med. Virol. 64 4 (2001) 482-486
4. Berg, G., Safferman, R.S., Dahling, D.R., Berman, D., 1984. US EPA Manual of Methods for Virology. Publication EPA-600/4-84-013. Environmental Monitoring and Support Laboratory, Cincinnati, OH, USA.
5. Carducci A., Arrighi S., and Ruschi A. Detection of coliphages and enteroviruses in sewage and aerosol from an activated sludge wastewater treatment plant. Lett. Appl. Microbiol. 21 (1995) 207-209
6. Chapron C.D., Ballester N.A., Fontaine J.H., Frades C.N., and Margonlin A.B. Detection of astroviruses, enteroviruses, and adenovirus types 40 and 41 in surface waters collected and evaluated by the information collection rule and an integrated cell culture-nested PCR procedure. Appl. Environ. Microbiol. 66 (2000) 2520-2525
7. Chen W.P., and Lee C.H. Estimating groundwater recharge from streamflow records. Environ. Geol. 44 (2003) 257-265
8. Chen C.H., Hsu B.M., and Wan M.T. Detection of enteroviruses within brackish water from the damshui river watershed, Taiwan. J. Environ. Eng. - ASCE 134 (2008) 486-492
9. Cronin A.A., Taylor R.G., Powell K.L., Barrett M.H., Trowsdale S.A., and Lerner D.N. Temporal variations in the depth-specific hydrochemistry and sewage-related microbiology of an urban sandstone aquifer, Nottingham, United Kingdom. Hydrogeol. J. 11 (2003) 205-216
10. Divizia M., Palombi L., Buonomo E., Donia D., Ruscio V., Equestre M., Leno L., Pana A., and Degener A.M. Genomic characterization of human and environmental polioviruses isolated in Albania. Appl. Environ. Microbiol. 65 (1999) 3534-3539
11. Donaldson K.A., Griffin D.W., and Paul J.H. Detection, quantitation and identification of enteroviruses from surface waters and sponge tissue from the Florida Keys using real-time RT-PCR. Water Res. 36 (2002) 2505-2514
12. Espinosa A.C., Mazari-Hiriart M., Espinosa R., Maruri-Avidal L., Mendez E., and Arias C.F. Infectivity and genome persistence of rotavirus and astrovirus in groundwater and surface water. Water Res. 42 (2008) 2618-2628
13. Fout G.S., Martinson B.C., Moyer M.W.N., and Dahling D.R. A multiplex reverse transcription-PCR method for detection of human enteric viruses in groundwater. Appl. Environ. Microbiol. 69 (2003) 3158-3164
14. Garin D., Fuchs F., Crance J.M., Rouby Y., Chapalain J.C., Lamarque D., Gounot A.M., and Aymard M. Exposure to enteroviruses and hepatitis A virus among divers in environmental waters in France, first biological and serological survey of a controlled cohort. Epidemiol. Infect. 113 (1994) 541-549
15. Gilgen M., Wegmller B., Burkhalter P., Buhler H.P., Luthy J., and Candrian U. Reverse transcription PCR to detect enteroviruses in surface water. Appl. Environ. Microbiol. 61 (1995) 1226-1231
16. Grabow W.O., Taylor M.B., and de Villiers J.C. New methods for the detection of viruses: call for review of drinking water quality guidelines. Water Sci. Technol. 43 (2001) 1-8
17. Grist N.R., Bell E.J., and Assaad F. Enteroviruses in human disease. Prog. Med. Virol. 24 (1978) 114-157
18. Grohmann G., Ashbolt N.J., Genova M.S., Logan G., Cox P., and Kueh C.S.W. Detection of viruses in coastal and river water systems in Sydney, Australia. Water Sci. Technol. 27 (1993) 457-461
19. Hafliger D., Gilgen M., Luthy J., and Hubner P. Semi-nested RT-PCR systems for small round structured viruses and detection of enteric viruses in seafood. Int. J. Food Microbiol. 37 (1997) 27-36
20. Haramoto E., Katayama H., Oguma K., and Ohgaki S. Application of cation-coated filter method to detection of noroviruses, enteroviruses, adenoviruses, and torque teno viruses in the Tamagawa River in Japan. Appl. Environ. Microbiol. 71 (2005) 2403-2411
21. Hovi T., Stenvik M., and Rosenlew M. Relative abundance of enterovirus serotypes in sewage differs from that in patients: clinical and epidemiological implications. Epidemiol. Infect. 116 (1996) 91-97
22. Hsu B.M., Chen C.H., Kung C.M., and Wan M.T. Evaluation of enteroviruses recoveries in surface water by different adsorption and elution procedures. Chemosphere 66 (2006) 964-969
23. Hsu B.M., Chen C.H., and Wan M.T. Genetic diversity of epidemic enterovirus 71 strains recovered from clinical and environmental samples in Taiwan. Virus Res. 126 (2007) 69-75
24. Hsu B.M., Huang Y.L., Hsu Y.F., and Shih F.C. Occurrence of protozoan and bacterial pathogens in water samples from small water systems in mountainous areas of Taiwan. J. Environ. Eng. - ASCE 134 5 (2008) 389-394
25. Hsu B.M., Chen C.H., and Wan M.T. Prevalence of enteroviruses in hot spring recreation areas of Taiwan. FEMS Immunol. Med. Microbiol. 52 (2008) 253-259
26. Jean J.S. Outbreak of enteroviruses and groundwater contamination in Taiwan: concept of biomedical hydrogeology. Hydrogeol. J. 7 (1999) 339-340
27. Jean J.S. Reply to comments by P. Gale and others on "Outbreak of enteroviruses and groundwater contamination in Taiwan: Concept of biomedical hydrogeology" (Jean 1999). Hydrogeol. J. 8 (2000) 350-353
28. Jean J.S., Guo H.R., Shen S.H., Liu C.C., Chang W.T., Yang Y.J., and Huang M.C. The association between rainfall rate and occurrence of enterovirus epidemic due to a contaminated well. J. Appl. Microbiol. 101 (2006) 1224-1231
29. Katayama H., Shimasaki A., and Shinichiro S. Development of a virus 15 concentration method and its application of detection of enterovirus and Norwalk 16 virus from coastal water. Appl. Environ. Microbiol. 68 (2002) 1033-1039
30. Khetsuriani N., Lamonte-Fowlkes A., Oberst S., and Pallansch M.A. Enterovirus surveillance-United States, 1970-2005. Morb. Mortal. Wkly. Rep. Surveill. Summ. 55 (2006) 1-20
31. Kim H.J., Shin Y.O., and Kim S.H. Detection of enteroviruses and mammalian reoviruses in Korean environmental waters. Microbiol. Immunol. 50 (2006) 781-786
32. Kocwa-Haluch R. Waterborne enteroviruses as a hazard for human health. Polish J. Environ. Studies 10 (2001) 485-487
33. Kopecka H., Dubrou S., Prevot J., Marechal J., and Lopez-Pila J.M. Detection of naturally occurring enteroviruses in waters by reverse transcription, polymerase chain reaction, and hybridization. Appl. Environ. Microbiol. 59 (1993) 1213-1219
34. Lee S.H., Lee C., Lee K.W., Cho H.B., and Kim S.J. The simultaneous detection of both enteroviruses and adenoviruses in environmental water samples including tap water with an integrated cell culture-multiplex-nested PCR procedure. J. Appl. Microbiol. 98 (2005) 1020-1029
35. Lee S.C., Lin C.L., Ke Y.F., Yang W.Y., Wu S.L., Wang S.F., Yang S.Y., Yang Z.Y., Chen P.J., and Chen H.Y. Analysis of enterovirus outbreak serotype in Taiwan from 1998 to 2004. Epidemiol. Bull. 21 (2005) 96-117
36. Lewis G.D., and Metcalf T.G. Polyethylene glycol precipitation for recovery of pathogenic viruses, including hepatitis A virus and human rotavirus, from oyster, water and sediment samples. Appl. Environ. Microbiol. 54 (1988) 1983-1988
37. Lin T.Y., Twu S.J., Ho M.S., Chang L.Y., and Lee C.Y. Enterovirus 71 outbreaks, Taiwan: Occurrence and recognition. Emerg. Infect. Dis. 9 (2003) 291-293
38. Lukasik J., Scott T.M., Andryshak D., and Farrah S.R. Influence of salts on virus adsorption to microporous filters. Appl. Environ. Microbiol. 66 (2000) 2914-2920
39. Melnick J.L. Enteroviruses. In: Evans A.S. (Ed). Viral Infections of Humans: Epidemiology and Control (1976), John Wiley & Sons, New York 163-207
40. Murrin K., and Slade J. Rapid detection of viable enteroviruses in water by tissue culture and semi-nested polymerase chain reaction. Water Sci. Technol. 35 (1997) 429-432
41. Nairn C., and Clements G.B. A study of enterovirus isolations in Glasgow from 1977 to 1997. J. Med. Virol. 58 (1999) 304-312
42. Pallin R., WynJones A.P., Place B.M., and Lightfoot N.F. The detection of enteroviruses in large volume concentrates of recreational waters by the polymerase chain reaction. J. Virol. Meth. 57 (1997) 67-77
43. Percival S., Chalmers R., Embrey M., Hunter P., Sellwood J., and Wyn-Jones P. Microbiology of waterborne diseases. Enterovirus: Poliovirus, coxsackievirus, echovirus (2004), Elsevier Academic Press, Amsterdam 401-418
44. Powell K.L., Taylor R.G., Cronin A.A., Barrett M.H., Pedley S., Sellwood J., Trowsdale S.A., and Lerner D.N. Microbial contamination of two urban sandstone aquifers in the UK. Water Res. 37 (2003) 339-352
45. Schwab K.J., De Leon R., and Sobsey M.D. Concentration and purification of beef extract mock eluates from water samples for the detection of enteroviruses, hepatitis A virus and norwalk virus by reverse transcription-PCR. Appl. Environ. Microbiol. 61 (1995) 531-537
46. Sedmak G., Bina D., and MacDonald J. Assessment of an enterovirus sewage surveillance system by comparison of clinical isolates with sewage isolates from Milwaukee, Wisconsin, collected August 1994-December 2002. Appl. Environ. Microbiol. 69 (2003) 7181-7187
47. Shih S., Ho M., Lin K., Wu S., Chen Y., Wu C., Lin T., Chang L., Tsao K., Ning H., Chang P., Jung S., Hsueh C., and Chang K.S. Genetic analysis of enterovirus 71 isolated from fatal and non-fatal cases of hand, foot and mouth disease during an epidemic in Taiwan, 1998. Virus Res. 68 2 (2000) 127-136
48. Tsai Y.L., Sobsey M.D., Sangermano L.R., and Palmer C.J. Simple method of concentrating enteroviruses and hepatitis A virus from sewage and ocean water for rapid detection by reverse transcriptase-polymerase chain reaction. Appl. Environ. Microbiol. 59 (1993) 3488-3491
49. Van Regenmortel M.H.V., Fauguet C.M., Bishop D.H.L., Carstens E.B., Estes M.K., Lemon S.M., Maniloff J., Mayo M.A., McGeoch D.J., Pringle C.R., and Wickner R.B. Virus Taxonomy: The Classification and Nomenclature of Viruses. Seventh Report of the International Committee on Taxonomy of Viruses (2000), Academic Press, San Diego, CA
50. Vivier J.C., Clay C.G., and Grabow W.O. Detection and rapid differentiation of human enteroviruses in water sources by restriction enzyme analysis. Water Sci. Technol. 43 (2001) 209-212
51. Wang J.R., Tuan Y.C., Tsai H.P., Yan J.J., Liu C.C., and Su I.J. Change of major genotype of enterovirus 71 in outbreaks of hand-foot-and-mouth disease in Taiwan between 1998 and 2000. J. Clin. Microbiol. 40 1 (2002) 10-15
52. WHO Scientific Group. Human viruses in water wastewater and soil. WHO Technical Report Series (1979), World Health Organization, Geneva vol. 639
53. Yan J.J., Su I.J., Chen P.F., Liu C.C., Yu C.K., and Wang J.R. Complete genome analysis of enterovirus 71 isolated from an outbreak in Taiwan and rapid identification of enterovirus 71 and coxsackievirus A16 by RT-PCR. J. Med. Virol. 65 2 (2001) 331-339