-
1
-
-
0041940818
-
Dynamic programming algorithms for RNA secondary structure prediction with pseudoknots
-
Akutsu T. Dynamic programming algorithms for RNA secondary structure prediction with pseudoknots. Discrete Appl. Math. 104 (2000) 45-62
-
(2000)
Discrete Appl. Math.
, vol.104
, pp. 45-62
-
-
Akutsu, T.1
-
3
-
-
0027081208
-
A base-triple structural domain in RNA
-
Chastain M., and Tinoco Jr. I. A base-triple structural domain in RNA. Biochemistry 31 (1992) 12733-12741
-
(1992)
Biochemistry
, vol.31
, pp. 12733-12741
-
-
Chastain, M.1
Tinoco Jr., I.2
-
4
-
-
34548812442
-
Crossings and nestings of matchings and partitions
-
Chen W.Y.C., Deng E.Y.P., Du R.R.X., Stanley R.P., and Yan C.H. Crossings and nestings of matchings and partitions. Trans. Amer. Math. Soc. 359 4 (2007) 1555-1575
-
(2007)
Trans. Amer. Math. Soc.
, vol.359
, Issue.4
, pp. 1555-1575
-
-
Chen, W.Y.C.1
Deng, E.Y.P.2
Du, R.R.X.3
Stanley, R.P.4
Yan, C.H.5
-
5
-
-
46349108122
-
Crossings and nestings of tangled-diagrams
-
(electronic)
-
Chen W.Y.C., Qin J., and Reidys C.M. Crossings and nestings of tangled-diagrams. Electron. J. Combin. 15 (2008) R86 (electronic)
-
(2008)
Electron. J. Combin.
, vol.15
-
-
Chen, W.Y.C.1
Qin, J.2
Reidys, C.M.3
-
6
-
-
0028307694
-
Identification and analysis of the pseudoknot containing gag-pro ribosomal frameshift signal of simian retrovirus-1
-
Dam E., Brierley I., Inglis S., and Pleij C. Identification and analysis of the pseudoknot containing gag-pro ribosomal frameshift signal of simian retrovirus-1. Discrete Appl. Math. 22 (1994) 2304-2310
-
(1994)
Discrete Appl. Math.
, vol.22
, pp. 2304-2310
-
-
Dam, E.1
Brierley, I.2
Inglis, S.3
Pleij, C.4
-
7
-
-
0022768309
-
Register allocation for unary-binary trees
-
Flajolet P., and Prodinger H. Register allocation for unary-binary trees. SIAM J. Comput. 15 (1986) 629-640
-
(1986)
SIAM J. Comput.
, vol.15
, pp. 629-640
-
-
Flajolet, P.1
Prodinger, H.2
-
8
-
-
58549086222
-
-
P. Flajolet, R. Sedgewick, Analytic Combinatorics, 2007 (electronic)
-
P. Flajolet, R. Sedgewick, Analytic Combinatorics, 2007 (electronic)
-
-
-
-
9
-
-
0000557786
-
Random walks in Weyl chambers and the decomposition of tensor powers
-
Grabiner D.J., and Magyar P. Random walks in Weyl chambers and the decomposition of tensor powers. Discrete Appl. Math. 2 (1993) 239-260
-
(1993)
Discrete Appl. Math.
, vol.2
, pp. 239-260
-
-
Grabiner, D.J.1
Magyar, P.2
-
11
-
-
0000167762
-
Computation of generating functions for biological molecules
-
Howell J.A., Smith T.F., and Waterman M.S. Computation of generating functions for biological molecules. SIAM J. Appl. Math. 39 (1980) 119-133
-
(1980)
SIAM J. Appl. Math.
, vol.39
, pp. 119-133
-
-
Howell, J.A.1
Smith, T.F.2
Waterman, M.S.3
-
12
-
-
43349093351
-
Asymptotic enumeration of RNA structures with pseudoknots
-
DOI 10.1007/s11538-007-9265-2 (electronic)
-
Jin E.Y., and Reidys C.M. Asymptotic enumeration of RNA structures with pseudoknots. Bull. Math. Biol. (2008). DOI 10.1007/s11538-007-9265-2 (electronic)
-
(2008)
Bull. Math. Biol.
-
-
Jin, E.Y.1
Reidys, C.M.2
-
13
-
-
38049010529
-
Combinatorics of RNA structures with pseudoknots
-
Jin E.Y., Qin J., and Reidys C.M. Combinatorics of RNA structures with pseudoknots. Bull. Math. Biol. 70 1 (2008) 45-67
-
(2008)
Bull. Math. Biol.
, vol.70
, Issue.1
, pp. 45-67
-
-
Jin, E.Y.1
Qin, J.2
Reidys, C.M.3
-
14
-
-
58549097181
-
-
E.Y. Jin, C.M. Reidys, R. Wang, Asymptotic analysis of k-noncrossing matchings, 2008, submitted for publication
-
E.Y. Jin, C.M. Reidys, R. Wang, Asymptotic analysis of k-noncrossing matchings, 2008, submitted for publication
-
-
-
-
15
-
-
0029348884
-
A comparison of thermodynamic foldings with comparatively derived structures of 16S and 16S-like rRNAs
-
Konings D.A.M., and Gutell R.R. A comparison of thermodynamic foldings with comparatively derived structures of 16S and 16S-like rRNAs. RNA 1 (1995) 559-574
-
(1995)
RNA
, vol.1
, pp. 559-574
-
-
Konings, D.A.M.1
Gutell, R.R.2
-
16
-
-
0029949699
-
Domain structure of the ribozyme from eubacterial ribonuclease P
-
Loria A., and Pan T. Domain structure of the ribozyme from eubacterial ribonuclease P. RNA 2 (1996) 551-563
-
(1996)
RNA
, vol.2
, pp. 551-563
-
-
Loria, A.1
Pan, T.2
-
17
-
-
58549116013
-
-
R. Lyngso, C. Pedersen, Pseudoknots in RNA secondary structures, in: Physics of Biological Systems: From Molecules to Species Sci., 1996
-
R. Lyngso, C. Pedersen, Pseudoknots in RNA secondary structures, in: Physics of Biological Systems: From Molecules to Species Sci., 1996
-
-
-
-
18
-
-
58549094010
-
-
Mapping RNA form and function. Science 2 (September 2005)
-
(2005)
Science
, vol.2
-
-
-
19
-
-
0035991766
-
Combinatorial properties of RNA secondary structures
-
Nebel M.E. Combinatorial properties of RNA secondary structures. J. Comput. Biol. 9 3 (2003) 541-574
-
(2003)
J. Comput. Biol.
, vol.9
, Issue.3
, pp. 541-574
-
-
Nebel, M.E.1
-
20
-
-
38248999941
-
Spaces of RNA secondary structures
-
Penner R.C., and Waterman M.S. Spaces of RNA secondary structures. Adv. Math. 101 (1993) 31-49
-
(1993)
Adv. Math.
, vol.101
, pp. 31-49
-
-
Penner, R.C.1
Waterman, M.S.2
-
21
-
-
0031105866
-
Generic properties of combinatory maps: Neutral networks of RNA secondary structures
-
Reidys C.M., Stadler P.F., and Schuster P. Generic properties of combinatory maps: Neutral networks of RNA secondary structures. Bull. Math. Biol. 59 2 (1997) 339-397
-
(1997)
Bull. Math. Biol.
, vol.59
, Issue.2
, pp. 339-397
-
-
Reidys, C.M.1
Stadler, P.F.2
Schuster, P.3
-
22
-
-
0033524952
-
A dynamic programming algorithm for RNA structure prediction inclusing pseudoknots
-
Rivas E., and Eddy S. A dynamic programming algorithm for RNA structure prediction inclusing pseudoknots. J. Mol. Biol. 285 (1999) 2053-2068
-
(1999)
J. Mol. Biol.
, vol.285
, pp. 2053-2068
-
-
Rivas, E.1
Eddy, S.2
-
23
-
-
58549120852
-
-
P.F. Stadler, private communication
-
P.F. Stadler, private communication
-
-
-
-
25
-
-
0000410641
-
Differentiably finite power series
-
Stanley R.P. Differentiably finite power series. European J. Combin. 1 (1980) 175-188
-
(1980)
European J. Combin.
, vol.1
, pp. 175-188
-
-
Stanley, R.P.1
-
28
-
-
0001509501
-
Secondary structure of single-stranded nucleic acids
-
Waterman M.S. Secondary structure of single-stranded nucleic acids. Adv. Math. Suppl. Stud. 1 (1978) 167-212
-
(1978)
Adv. Math. Suppl. Stud.
, vol.1
, pp. 167-212
-
-
Waterman, M.S.1
-
29
-
-
0001947129
-
Combinatorics of RNA hairpins and cloverleafs
-
Waterman M.S. Combinatorics of RNA hairpins and cloverleafs. Stud. Appl. Math. 60 (1979) 91-96
-
(1979)
Stud. Appl. Math.
, vol.60
, pp. 91-96
-
-
Waterman, M.S.1
-
30
-
-
0000904385
-
Linear trees and RNA secondary structure
-
Waterman M.S., and Schmitt W.R. Linear trees and RNA secondary structure. Discrete Appl. Math. 51 (1994) 317-323
-
(1994)
Discrete Appl. Math.
, vol.51
, pp. 317-323
-
-
Waterman, M.S.1
Schmitt, W.R.2
|