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Volumn 104, Issue 1-3, 2000, Pages 45-62

Dynamic programming algorithms for RNA secondary structure prediction with pseudoknots

Author keywords

Approximation algorithms; Computational biology; Dynamic programming; Pseudoknot; RNA secondary structure

Indexed keywords


EID: 0041940818     PISSN: 0166218X     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0166-218X(00)00186-4     Document Type: Article
Times cited : (249)

References (18)
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  • 3
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    • Akutsu, T.1
  • 4
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    • RNA pseudoknots modeling using intersections of stochastic context free grammars with applications to database search
    • L. Hunter, & T.E. Klein. Singapore: World Scientific
    • Brown M., Wilson C. RNA pseudoknots modeling using intersections of stochastic context free grammars with applications to database search. Hunter L., Klein T.E. Pacific Symposium on Biocomputing'96. 1996;109-125 World Scientific, Singapore.
    • (1996) Pacific Symposium on biocomputing'96 , pp. 109-125
    • Brown, M.1    Wilson, C.2
  • 5
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    • Dynamic programming with convexity, concavity and sparsity
    • Galil Z., Park K. Dynamic programming with convexity, concavity and sparsity. Theoret. Comput. Sci. 92:1992;49-76.
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    • Galil, Z.1    Park, K.2
  • 8
    • 84976657294 scopus 로고
    • The complexity of some problems on subsequences and supersequences
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    • (1978) J. ACM , vol.25 , pp. 322-336
    • Maier, R.1
  • 9
    • 0018086876 scopus 로고
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    • Mizuno H., Sundaralingam M. Stacking of Crick Wobble pair and Watson-Crick pair: stability rules of G-U pairs at ends of helical stems in tRNAs and the relation to codon-anticodon Wobble interaction. Nucleic Acids Res. 5:1978;4451-4461.
    • (1978) Nucleic Acids Res. , vol.5 , pp. 4451-4461
    • Mizuno, H.1    Sundaralingam, M.2
  • 16
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    • RNA secondary structure: A complete mathematical analysis
    • Waterman M.S., Smith T.F. RNA secondary structure: a complete mathematical analysis. Math. Biosci. 41:1978;257-266.
    • (1978) Math. Biosci. , vol.41 , pp. 257-266
    • Waterman, M.S.1    Smith, T.F.2
  • 17
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    • RNA secondary structures and their prediction
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  • 18
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    • Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information
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    • Zuker, M.1    Stiegler, P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.