A linkage map of the porcine genome from a large-scale White Duroc x Erhualian resource population and evaluation of factors affecting recombination rates

Animal Genetics

Volumn 40, Issue 1, 2009, Pages 47-52

  Guo, Y ^a,b,c   Mao, H ^a   Ren, J ^a   Yan, X ^a   Duan, Y ^a   Yang, G ^a   Ren, D ^a   Zhang, Z ^a   Yang, B ^a   Ouyang, J ^a   Brenig, B ^c   Haley, C ^b,d   Huang, L ^a  

^a JIANGXI AGRICULTURAL UNIVERSITY   (China)

^b UNIVERSITY OF EDINBURGH   (United Kingdom)

^c UNIVERSITY OF GÖTTINGEN   (Germany)

^d WESTERN GENERAL HOSPITAL   (United Kingdom)

Author keywords

Crossover; Genetic marker; Linkage map; Pig

Indexed keywords

MICROSATELLITE DNA;

ANIMAL; ARTICLE; CHROMOSOME MAP; FEMALE; GENETIC RECOMBINATION; GENETICS; GENOME; MALE; SEXUAL DEVELOPMENT; SWINE;

ANIMALS; CHROMOSOME MAPPING; FEMALE; GENOME; MALE; MICROSATELLITE REPEATS; RECOMBINATION, GENETIC; SEX CHARACTERISTICS; SUS SCROFA;

ANIMALIA; SUIDAE; SUS;

EID: 58549095934     PISSN: 02689146     EISSN: 13652052     Source Type: Journal    
DOI: 10.1111/j.1365-2052.2008.01802.x     Document Type: Article

References (31)

1. Andersson L. Sandberg K. (1984) Genetic linkage in the horse. II. Distribution of male recombination estimates and the influence of age, breed and sex on recombination frequency. Genetics 106, 109 22.
2. Archibald A.L., Haley C.S., Brown J.F. et al. (1995) The PiGMaP consortium linkage map of the pig (Sus scrofa). Mammalian Genome 6, 157 75.
3. Barbosa A., Demeure O., Urien C., Milan D., Chardon P. Renard C. (2004) A physical map of large segments of pig chromosome 7q11-q14: comparative analysis with human chromosome 6p21. Mammalian Genome 15, 982 95.
4. Barendse W., Vaiman D., Kemp S.J. et al. (1997) A medium-density genetic linkage map of the bovine genome. Mammalian Genome 8, 21 8.
5. Bridges C.B. (1915) A linkage variation in Drosophila. Journal of Experimental Zoology 19, 1 21.
6. Broman K.W., Murray J.C., Sheffield V.C., White R.L. Weber J.L. (1998) Comprehensive human genetic maps: individual and sex-specific variation in recombination. American Journal of Human Genetics 63, 861 9.
7. Callan H.G. Perry P.E. (1977) Recombination in male and female meiocytes contrasted. Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences 277, 227 33.
8. Donis-Keller H., Green P., Helms C. et al. (1987) A genetic linkage map of the human genome. Cell 51, 319 37.
9. Dunn L.C. Bennett D. (1967) Sex differences in recombination of linked genes in animals. Genetical Research 9, 211 20.
10. Ellegren H., Chowdhary B.P., Johansson M., Marklund L., Fredholm M., Gustavsson I. Andersson L. (1994) A primary linkage map of the porcine genome reveals a low rate of genetic recombination. Genetics 137, 1089 100.
11. Elston R.C., Lange E. Namboodiri K.K. (1976) Age trends in human chiasma frequencies and recombination fractions. II. Method for analyzing recombination fractions and applications to the ABO: nail-patella linkage. American Journal of Human Genetics 28, 69 76.
12. Fahrenkrug S., Wagner M., Morrison L. Alexander L.J. (2005) Map assignments of 373 previously unreported porcine microsatellites. Animal Genetics 36, 76 86.
13. Green P., Falls K. Crooks S. (1994) cri-map Version 2.4. Washington University School of Medicine, St Louis, MO.
14. Groenen M.A., Crooijmans R.P., Veenendaal A., Cheng H.H., Siwek M. van der Poel J.J. (1998) A comprehensive microsatellite linkage map of the chicken genome. Genomics 49, 265 74.
15. Keats B.J., Sherman S.L., Morton N.E., Robson E.B., Buetow K.H., Cartwright P.E., Chakravarti A., Francke U., Green P.P. Ott J. (1991) Guidelines for human linkage maps: an international system for human linkage maps (ISLM, 1990). Genomics 9, 557 60.
16. Korwin-Kossakowska A., Reed K.M., Pelak C., Krause E., Morrison L. Alexander L.J. (2002) Radiation hybrid mapping of 118 new porcine microsatellites. Animal Genetics 33, 224 7.
17. Krause E., Morrison L., Reed K.M. Alexander L.J. (2002) Radiation hybrid mapping of 273 previously unreported porcine microsatellites. Animal Genetics 33, 477 85.
18. Lange K., Page B.M. Elston R.C. (1975) Age trends in human chiasma frequencies and recombination fractions. I. Chiasma frequencies. American Journal of Human Genetics 27, 410 8.
19. Marklund L., Johansson Moller M., Hoyheim B., Davies W., Fredholm M., Juneja R.K., Mariani P., Coppieters W., Ellegren H. Andersson L. (1996) A comprehensive linkage map of the pig based on a wild pig-Large White intercross. Animal Genetics 27, 255 69.
20. Mikawa S., Akita T., Hisamatsu N. et al. (1999) A linkage map of 243 DNA markers in an intercross of Göttingen miniature and Meishan pigs. Animal Genetics 30, 407 17.
21. Morgan T.H., Bridges C.B. Sturtevant A.H. (1925) The genetics of Drosophila. Martinus Nijhoff, Gravenhage, the Netherlands.
22. Neff M.W., Broman K.W., Mellersh C.S., Ray K., Acland G.M., Aguirre G.D., Ziegle J.S., Ostrander E.A. Rine J. (1999) A second-generation genetic linkage map of the domestic dog, Canis familiaris. Genetics 151, 803 20.
23. Ott J. (2001) Analysis of Human Genetic Linkage (revised edition). Johns Hopkins University Press, Baltimore, MD.
24. Ren J., Guo Y.M., Ma J.W. Huang L.S. (2006) Growth and meat quality QTL in pigs with special reference to a very large Erhualian × White Duroc resource population. In : Proceedings of 8th World Congress on Genetics Applied in Livestock Production. Belo Horizonte, MG, Brazil.
25. Renwick J.H. Schulze J. (1965) Male and female recombination fractions for the nailpatella: ABO linkage in man. Annals of Human Genetics 28, 379 92.
26. Rohrer G.A., Alexander L.J., Keele J.W., Smith T.P. Beattie C.W. (1994) A microsatellite linkage map of the porcine genome. Genetics 136, 231 45.
27. Rohrer G.A., Alexander L.J., Hu Z., Smith T.P., Keele J.W. Beattie C.W. (1996) A comprehensive map of the porcine genome. Genome Research 6, 371 91.
28. Simchen G. Stamberg J. (1969) Fine and coarse controls of genetic recombination. Nature 222, 329 32.
29. Sobel E. Lange K. (1996) Descent graphs in pedigree analysis: applications to haplotyping, location scores, and marker-sharing statistics. American Journal of Human Genetics 58, 1323 37.
30. Weitkamp L.R., van Rood J.J., Thorsby E. et al. (1973) The relation of parental sex and age to reombination in the HL-A system. Human Heredity 23, 197 205.
31. Zetka M.C. Rose A.M. (1995) Mutant rec-1 eliminates the meiotic pattern of crossing over in Caenorhabditis elegans. Genetics 141, 1339 49.