A comprehensive linkage map of the pig based on a wild pig - Large White intercross

Animal Genetics

Volumn 27, Issue 4, 1996, Pages 255-269

  Marklund, L ^a   Johansson Moller, M ^a   Hoyheim B ^b   Davies, W ^b   Fredholm, M ^c   Juneja, R K ^a   Mariani, P ^a   Coppieters, W ^d   Ellegren, H ^a   Andersson, L ^a  

^a SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

^b NORWEGIAN UNIVERSITY OF LIFE SCIENCES   (Norway)

^c UNIVERSITY OF COPENHAGEN   (Denmark)

^d UNIVERSITY OF LIÈGE   (Belgium)

Author keywords

linkage heterogeneity; linkage map; pig

Indexed keywords

ANIMALIA; PIERIS BRASSICAE; SUS SCROFA;

EID: 10344262013     PISSN: 02689146     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1365-2052.1996.tb00487.x     Document Type: Article

References (51)

1. Adams M.D., Dubnick M., Kerlavage A.R. et al. (1992) Sequence identification of 2375 human brain genes. Nature 355, 632-4.
2. Andersson L., Haley C., Ellegren H. et al. (1994a) Genetic mapping of quantitative trait loci for growth and fatness in pig. Science 263, 1771-4.
3. Andersson L., Edfors-Lilja I., Ellegren H., Johansson M. & Marklund L. (1994b) Mapping trait loci by crossbreeding genetically divergent populations of domestic animals. Animal Biotechnology 2, 225-31.
4. Andresen E. (1962) Blood group in pigs. Annals of the New York Academy of Sciences 97, 205-25.
5. Aquadro C.F. (1992) Why is the genome variable? Insights from Drosophila. Trends in Genetics 10, 355-62.
6. Archibald A.L., Haley C.S., Brown J.F. et al. (1995) The PIGMaP consortium linkage map of the pig (Sus scrofa). Mammalian Genome 6, 157-75.
7. Brown J.F., Hardge T., Rettenberger G. & Archibald A.L. (1994) Four new porcine polymorphic microsatellite loci (S0032, S0034, S0036, and S0037). Animal Genetics 25, 365.
8. Buetow K.H., Shiang R., Yang P. et al. (1991) A detailed multipoint map of human chromosome 4 provides evidence for linkage heterogeneity and position-specific recombination rates. American Journal of Human Genetics 48, 911-25.
9. Chowdhary B.P., Lundgren S., Johansson M. et al. (1995) In situ hybridization mapping of a 500kDa calcium sensing protein gene (LRP-2) to human chromosome 2q31-q32·1 and porcine chromosome 15q22-q24. Cytogenetic and Cell Genetics 71, 120-3.
10. Coppieters W., Van de Weghe A., Depicker A. et al. (1995) Polymorphic CAC/T repetitive sequence in the pig genome 1. Animal Genetics 26, 327-30.
11. Edfors-Lilja I., Gustafsson U., Duval-Iflah Y, et al. (1995). The porcine intestinal receptor for Escherichia coli K88ab, K88ac: regional localization on chromosome 13 and influence of IgG response to the K88 antigen. Animal Genetics 26, 237-42.
12. Ellegren H. & Basu T. (1995) Filling the gaps in the porcine linkage map: isolation of microsatellites from chromosome 18 using flow-sorting and SINE-PCR. Cytogenetics and Cell Genetics 71, 370-3.
13. Ellegren H., Chowdhary B.P., Johansson M. et al. (1994a) A primary linkage map of the porcine genome reveals a low rate of genetic recombination. Genetics 137, 1089-100.
14. Ellegren H., Chowdhary B.P., Johansson M. & Andersson L. (1994b) Integrating the porcine physical and linkage map using cosmid-derived markers. Animal Genetics 25, 155-64.
15. Ellegren H., Chowdhary B.P., Fredholm M. et al. (1994c) A physically anchored linkage map of pig chromosome 1 uncovers sex- and position-specific recombination rates. Genomics 24, 342-55.
16. n microsatellites: genotyping of unrelated animals from four different breeds and linkage studies. Mammalian Genome 4, 187-92.
17. Gahne B. & Juneja R.K. (1986) Extensive genetic polymorphism of four plasma α-protease inhibitors in pigs and evidence for tight linkage between the structural loci of these inhibitors. Animal Genetics 17, 135-57.
18. Graphodatsky A., Filippov V., Biltueva L. et al. (1992) Localization of the pig gene ESD to chromosome 13 by in situ hybridization. Mammalian Genome 3, 52-3.
19. Green P., Falls K. & Crook S. (1990) Documentation for CRI-MAP, version 2-4 (St Louise: Washington University School of Medicine).
20. Gudmundsson G.H., Magnusson K.P., Chowdhary B.P., Johansson M., Andersson L. & Boman H.G. (1995) Structure of the gene for the porcine peptide antibiotic PR-39, a cathlen gene family member: Comparative mapping of the locus for the human peptide antibiotic FALL39. Proceedings of the National Academy of Sciences USA 92, 7085-9.
21. Gustavsson I. (1988) Standard karyotype of the domestic pig. Hereditas 109, 151-7.
22. Hillyard A.L., Davisson M.T., Dolittle D.P., Guidi J.N., Maltais L.J. & Roderick T.H. (1993) Locus maps of maps (Mus musculus/domesticus). In: Genetic maps 6th edition (ed. by S.J. O'Brien). Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
23. Johansson M., Ellegren H. & Andersson L. (1992a) Cloning and characterization of highly polymorphic porcine microsatellites. Journal of Heredity 83, 196-8.
24. Johansson M., Ellegren H., Marklund L., Gustafsson U., Ringmar-Cederberg E., Andersson K., Edfors-Lilja I. & Andersson L. (1992b) The gene for dominant white color in the pig is closely linked to ALB and PDGFRA on chromosome 8. Genomics 14, 965-9.
25. Johansson M., Ellegren H., Marklund L. et al. (1994) Linkage maps of porcine chromosomes 3, 6, and 9 based on 31 polymorphic markers. Mammalian Genome 5, 785-90.
26. Johansson M., Ellegren H. & Andersson L. (1995) Comparative mapping reveals extensive linkage coservation - but with gene order rearrangements - between the pig and the human genomes. Genomics 25, 682-90.
27. Juneja R.K. & Andersson L. (1994) Genetic variation at pig plasma protein locus PLP1 and its assignment to chromosome 5. Animal Genetics 25, 353-5.
28. Keats B., Sherman S., Morton N., et al. (1991) Guidelines for human linkage maps: An international system for human linkage maps (ISLM, 1990). Genomics 9, 557-60.
29. Kuryl J., Zurkowski M., Hojny J. & Hradecky J. (1989) Plasma α-protease inhibitors in Norwegian Landrace and Czech Landrace pigs. Animal Genetics 20, 299-305.
30. Larsen N.J., Ellegren H., Bräuner Nielsen P. & Andersson L. (1995) Genetic variation at the growth hormone locus in a wild pig intercross; test of association to phenotypic traits and linkage to the blood group D locus. Theoretical and Applied Genetics 91, 1074-77.
31. Lathrop G.M., Lalouel J.-M., Julier C. & Ott J. (1985) Multilocus linkage analysis in humans: Detection of linkage and estimation of recombination. American Journal of Human Genetics 37, 482-98.
32. Lin C.C., Biederman B.M., Jamro H.K., Hawthorn A.B. & Church R.B. (1980) Porcine (Sus scrofa domestica) chromosome identification and suggested nomenclature. Canadian, Journal of Genetics and Cytology 22, 103-16.
33. Mariani P., Johansson M., Ellegren H., Harbitz I., Juneja R.K. & Andersson L. (1992) Multiple restriction fragment length polymorphism in the porcine calcium release channel gene (CRC): Assignment to the halthane (HAL) linkage group. Animal Genetics 23, 185-90.
34. Mariani P., Johansson Moller M., Høyheim B. et al. (1996) The Extension coat color locus and the loci for blood group O and tyrosine aminotransferase are on pig chromosome 6. Journal of Heredity, in press.
35. Morton N.E. (1991) Parameters of the human genome. Proceedings of the National Academy of Science USA 88, 7474-76.
36. Mueckler M., Caruso C., Panico B. et al. (1985) Sequence and structure of a human glucose transporter. Science 229, 941-45.
37. O'Brien S.J. (1991) Mammalian genome mapping: Lessons and prospects. Current Opinion in Genetics and Development 1, 105-111.
38. Oishi T., Tanaka K., Otani T. & Tamada S. (1989) Genetic variations of blood groups and biochemical polymorphisms in Meishan pigs. Bulletin of the National Institute of Animal Industries 48, 1.
39. Ott J. (1985) Analysis of human genetic linkage. (In: Johns Hopkins Series Contemporary Medicine and Public Health (ed. by S.H. Boyer, G.M Green, R.T. Johnson, et al.), pp. 1-223. Johns Hopkins University Press, Baltimore and London.
40. +-ATPase. Primary structure and spatial organisation. FEBS Letters 201, 237-45.
41. Paszek A.A., Schook L.B., Louis C.F. et al. (1995) First international workshop on porcine chromosome 6. Animal Genetics 26, 377-401.
42. Pikkarainen T., Eddy R., Fukushima Y, et al. (1987) Human Laminin B1 Chain. Journal of Biological Chemistry 262, 10454-62.
43. Rettenberger G., Klett C., Zechner U., Kunz J., Vogel W. & Hameister H. (1995) Visualization of the conservation of synteny between humans and pigs by heterologous chromosomal painting. Genetics 26, 372-8.
44. Riordan J., Rommens J., Kerem B.-S. et al. (1989) Identification of the the Cystic Fibrosis Gene: Cloning and characterization of complementary DNA. Science 245, 1066-72.
45. Rohrer G.A., Alexander L.J., Keele J.W., Smith T.P. & Beattie C.W. (1994) A microsatellite linkage map of the porcine genome. Genetics 136, 231-45.
46. Strehler E., James P., Fischer R. et al. (1990) Peptide sequence analysis and molecular cloning reveal two calcium pump isoforms in human erythrocyte membrane. Journal of Biological Chemistry 265, 2835-42.
47. Ullrich A., Bell J.R., Chen E.Y. et al. (1985) Human insulin receptor and its relationship to the tyrosine kinase family of oncogenes. Nature 313, 756-61.
48. Van de Weghe A., Van Zeveren A., Bouquet Y. & Varewyck H. (1987) The serum protease inhibitor linkage group in Belgian pig breeds. Animal Genetics 18, 63-9.
49. Xie H., Alexander L.J., Rohrer G.A., Beattie C.W. & Troyer D.L. (1995) Use of DISC - PCR and FISH to assign a linkage group to pig chromosome 10. Mammalian Genome 6, 139-41.
50. Yerle M., Lahhib-Mansais Y., Mellink C. et al. (1995) The PIGMaP consortium cytogenetic map of the domestic pig (Sus scrofa domestica). Mammalian Genome 6, 176-86.
51. Zhang W., Haley C. & Moran C. (1995) Alignment of the PiGMaP and USDA linkage maps of porcine chromosome 2 and 5: Animal Genetics 26, 361-4.