Dispersal and population genetic structure of Telmatherina antoniae, an endemic freshwater Sailfin silverside from Sulawesi, Indonesia

Journal of Evolutionary Biology

Volumn 22, Issue 2, 2009, Pages 314-323

  Walter, R P ^a   Haffner, G D ^a   Heath, D D ^a  

^a UNIVERSITY OF WINDSOR   (Canada)

Author keywords

Dispersal; Lake Matano; Microsatellites; Population structure; Telmatherinidae

Indexed keywords

FRESH WATER; MICROSATELLITE DNA;

BAYESIAN ANALYSIS; DISPERSAL; ENDEMIC SPECIES; GENETIC MARKER; POPULATION GENETICS; POPULATION STRUCTURE; REPRODUCTIVE ISOLATION; TELEOST;

ANIMAL; ARTICLE; BAYES THEOREM; GENETICS; GENOTYPE; INDONESIA; PHYSIOLOGY; POPULATION DYNAMICS; POPULATION GENETICS; POPULATION MIGRATION; SMEGMAMORPHA;

ANIMAL MIGRATION; ANIMALS; BAYES THEOREM; FRESH WATER; GENETICS, POPULATION; GENOTYPE; INDONESIA; MICROSATELLITE REPEATS; POPULATION DYNAMICS; SMEGMAMORPHA;

ASIA; EURASIA; INDONESIA; LAKE MATANO; MALILI LAKES; SOUTH SULAWESI; SOUTHEAST ASIA;

ARGENTINA ELONGATA; TELMATHERINA ANTONIAE; TELMATHERINIDAE;

EID: 58549084199     PISSN: 1010061X     EISSN: 14209101     Source Type: Journal    
DOI: 10.1111/j.1420-9101.2008.01645.x     Document Type: Article

References (58)

1. Abila, R., Barluenga, M., Engelken, J., Meyer, A. Salzburger, W. 2004. Population-structure and genetic diversity in a haplochromine fish cichlid of a satellite lake of Lake Victoria. Mol. Ecol. 13 : 2589 2602.
2. Beheregaray, L.B. Sunnucks, P. 2001. Fine-scale genetic structure, estuarine colonization and incipient speciation in the marine silverside fish Odontesthes argentinensis. Mol. Ecol. 10 : 2849 2866.
3. Bilton, D.T., Paula, J. Bishop, J.D.D. 2002. Dispersal, genetic differentiation and speciation in estuarine organisms. Estuar. Coast. Shelf Sci. 55 : 937 952.
4. Bohonak, A.J. 1999. Dispersal, gene flow, and population structure. Q. Rev. Biol. 74 : 2145.
5. Bossart, J.L. Prowell, D.P. 1998. Genetic estimates of population structure and gene flow: limitations, lessons and new directions. Trends Ecol. Evol. 13 : 202 206.
6. Bowen, B.W. Karl, S.A. 2007. Population genetics and phylogeography of sea turtles. Mol. Ecol. 16 : 4886 4907.
7. Corander, J. Marttinen, P. 2006. Bayesian identification of admixture events using multi-locus molecular markers. Mol. Ecol. 15 : 2833 2843.
8. Danley, P.D., Markert, J.A., Arnegard, M.E. Kocher, T.D. 2000. Divergence with gene flow in rock-dwelling cichlids of Lake Malawi. Evolution 54 : 1725 1737.
9. Dieringer, D. Schlötterer, C. 2002. Microsatellite Analyser (msa): a platform independent analysis tool for large microsatellite data sets. Mol. Ecol. Notes 3 : 167 169.
10. Duftner, N., Sefc, K.M., Koblmüller, S., Nevado, B., Verheyen, E., Phiri, H. Sturmbauer, C. 2006. Distinct population structure in a phenotypically homogeneous rock-dwelling cichlid fish from Lake Tanganyika. Mol. Ecol. 15 : 2381 2395.
11. DuPont, P.-P., Bourret, V. Bernatchez, L. 2007. Interplay between ecological, behavioural and historical factors in shaping the genetic structure of sympatric walleye populations Sander vitreus. Mol. Ecol. 16 : 937 951.
12. Elphinstone, M.S., Hinten, G.N., Anderson, M.J. Nock, C.J. 2003. An inexpensive and high-throughput procedure to extract and purify total genomic DNA for population studies. Mol. Ecol. Notes 3 : 317 320.
13. Evanno, G., Regnaut, S. Goudet, J. 2005. Detecting the number of clusters of individuals using the software structure: a simulation study. Mol. Ecol. 14 : 2611 2620.
14. Excoffier, L., Laval, G. Schneider, S. 2005. arlequin version 3.0: an integrated software package for population genetics data analysis. Evol. Bioinform. Online 1 : 47 50.
15. Gray, S.M. McKinnon, J.S. 2006. A comparative description of mating behaviour in the endemic Telmatherinid fishes of Sulawesi's Malili Lakes. Environ. Biol. Fishes 75 : 471 482.
16. Gray, S.M., Dill, L.M., Tantu, F.Y., Loew, E.R., Herder, F. McKinnon, J.S. 2008. Environment contingent sexual selection in a colour polymorphic fish. Proc. R. Soc. B 275 : 1785 1791.
17. Haffner, G.D., Hehanussa, P.E. Hartoto, D. 2001. The biology and physical properties of large lakes of Indonesia. In : The Great Lakes of the World: Food-Web Health and Integrity (M. Manwar R.E. Heck, eds pp. 183 192. Backuys, Leiden.
18. Hauser, L., Carvalho, G.R. Pitcher, T.J. 1998. Genetic population structure in the Lake Tanganyika sardine Limnothrissa miodon. J. Fish Biol. 53 (Suppl. A 413 429.
19. Hendry, A.P., Hensleigh, J.E. Reisenbichler, R.R. 1998. Incubation temperature, developmental biology and the divergence of sockeye salmon within Lake Washington. Can. J. Fish. Aquat. Sci. 55 : 1387 1394.
20. Hendry, A.P., Berg, O.K. Quinn, T.P. 1999. Condition dependence and adaptation-by-time: breeding date, life history, and energy allocation in a population of salmon. Oikos 85 : 499 514.
21. Hendry, A.P., Taylor, E.B. McPhail, J.D. 2002. Adaptive divergence and the balance between selection and gene flow: lake and stream stickleback in the Misty system. Evolution 56 : 119 1216.
22. Herder, F., Nolte, A.W., Pfaender, J., Schwarzer, J., Hadiaty, R.K. Schliewen, U. 2006. Adaptive radiation and hybridization in Wallace's Dreamponds: evidence from sailfin silversides in the Malili Lakes of Sulawesi. Proc. R. Soc. B 273 : 2209 2217.
23. Herder, F., Pfaender, J. Schliewen, U.K. 2008. Adaptive sympatric speciation of polychromatic "roundfin" sailfin silverside fish in Lake Matano. Evolution 62 : 2178 2195.
24. Johnson, M.S. Black, R. 1984. The Wahlund effect and the geographical scale of variation in the intertidal limpet Siphonaria sp. Mar. Biol. 79 : 295 302.
25. Koblmüller, S., Sefc, K.M., Duftner, N., Warum, M. Sturmbauer, C. 2007. Genetic population structure as an indirect measure of dispersal ability in a Lake Tanganyika cichlid. Genetica 130 : 121 131.
26. Kottelat, M. 1991. Sailfin silversides Pisces: Telmatherinidae of Lake Matano, Sulawesi, Indonesia, with descriptions of six new species. Ichthyol. Explor. Freshw. 1 : 321 344.
27. Kottelat, M., Whitten, A.J., Kartikasari, S.N. Wirjoatmodjo, S. 1993. Freshwater Fishes of Western Indonesia and Sulawesi. Periplus, Jakarta.
28. Latch, E.K., Dharmarajan, G., Glaubitz, J.C. Rhodes, O.E. Jr. 2006. Relative performance of Bayesian clustering software for inferring population substructure and individual assignment at low levels of population differentiation. Conserv. Genet. 7 : 295 302.
29. Manel, S., Gaggiotti, O.E. Waples, R.S. 2005. Assignment methods: matching biological questions with appropriate techniques. Trends Ecol. Evol. 20 : 136 142.
30. Mantel, N. 1967. The detection of disease clustering and a generalized regression approach. Cancer Res. 27 : 209 220.
31. Miller, M. 1997. Tools for population genetic analysis (tfpga) 1.3: a Windows program for analysis of allozyme and molecular population genetic data. Computer software distributed by the author: markperrymiller@gmail.com.
32. van Oosterhout, C., Hutchinson, W.F., Wills, D.P.M. Shipley, P. 2004. microchecker: software for identifying and correcting genotyping errors in microsatellite data. Mol. Ecol. Notes 4 : 535 538.
33. Paetkau, D., Slade, R., Burdens, M. Estoup, A. 2004. Genetic assignment methods for the direct, real time estimation of migration rate: a simulation-based exploration of accuracy and power. Mol. Ecol. 13 : 55 65.
34. Palumbi, S.R. 1992. Marine speciation on a small planet. Trends Ecol. Evol. 7 : 114 118.
35. Piry, S., Alapetite, A., Cornuet, J.M., Paetkau, D., Baudouin, L. Estoup, A. 2004. geneclass2: a software for genetic assignment and first-generation migrant detection. J. Heredity 95 : 536 539.
36. Potvin, C. Bernatchez, L. 2001. Lacustrine spatial distribution of landlocked Atlantic salmon populations assessed across generations by multi-locus individual assignment and mixed-stock analyses. Mol. Ecol. 10 : 2375 2388.
37. Power, M., O'Connell, M.F. Dempson, J.B. 2005. Ecological segregation within and among Arctic char morphotypes in Gander Lake, Newfoundland. Environ. Biol. Fishes 73 : 263 274.
38. Pritchard, J.K., Stephens, M. Donnelly, P. 2000. Inference of population structure using multilocus genotype data. Genetics 155 : 945 959.
39. Rannala, B. Mountain, J.L. 1997. Detecting immigration by using multilocus genotypes. Proc. Natl Acad. Sci. Biol. 94 : 9197 9201.
40. Raymond, M. Rousset, F. 1995. genepop version 1.2: population genetics software for exact tests and ecumenicism. J. Heredity 86 : 248 249.
41. Rice, W.R. Hostert, E.E. 1993. Laboratory experiments on speciation: what have we learned in 40 years? Evolution 47 : 1637 1653.
42. Rico, C. Turner, G.F. 2002. Extreme microallopatric divergence in a cichlid species from Lake Malawi. Mol. Ecol. 11 : 243 251.
43. Rowe, G. Beebee, T.J.C. 2007. Defining population boundaries: use of three Bayesian approaches with microsatellite data from British natterjack toads Bufo calamita. Mol. Ecol. 16 : 785 796.
44. Roy, D. 2006. The evolutionary history and ecology of Telmatherina in Lake Matano: an example of adaptive radiation in an ancient lake. PhD Thesis, University of Windsor, Windsor, ON.
45. Roy, D., Docker, M.F., Hehanussa, P., Heath, D.D. Haffner, G.D. 2004. Genetic and morphological data supporting the hypothesis of adaptive radiation in the endemic fish of Lake Matano. J. Evol. Biol. 17 : 1268 1276.
46. Roy, D., Paterson, G., Hamilton, P.B., Heath, D.D. Haffner, G.D. 2007a. Resource-based adaptive divergence in the freshwater fish Telmatherina from Lake Matano, Indonesia. Mol. Ecol. 16 : 35 48.
47. Roy, D., Docker, M.F., Haffner, G.D. Heath, D.D. 2007b. Body shape vs. colour associated initial divergence in the Telmatherina radiation in Lake Matano, Sulawesi, Indonesia. J. Evol. Biol. 20 : 1126 1137.
48. Rüber, L., Meyer, A., Sturmbauer, C. Verheyen, E. 2001. Population structure in two sympatric species of the Lake Tanganyika cichlid tribe Eretmodini: evidence for introgression. Mol. Ecol. 10 : 1207 1225.
49. Seehausen, O. 2000. Explosive speciation rates and unusual species richness in haplochromine cichlid fishes: effects of sexual selection. Adv. Ecol. Res. 31 : 237 274.
50. Sefc, K.M., Baric, S., Salzburger, W. Sturmbauer, C. 2007. Species-specific population structure in rock-specialized cichlid species in Lake Tanganika, East Africa. J. Mol. Evol. 64 : 33 49.
51. Shaw, P.W., Turner, G.F., Idid, M.R., Robinson, R.L. Carvalho, G.R. 2000. Genetic population structure indicates sympatric speciation of Lake Malawi pelagic cichlids. Proc. R. Soc. B 267 : 2273 2280.
52. Stepian, C.A. Faber, J.E. 1998. Population genetic structure, phylogeography and spawning philopatry in walleye Stizostedion vitreum from mitochondrial DNA control region sequences. Mol. Ecol. 7 : 1757 1769.
53. Taylor, M.I. Verheyen, E. 2001. Microsatellite data reveals weak population substructuring in Copadichromis sp. 'viriginalis kajose', a demersal cichlid from Lake Malawi, Africa. J. Fish Biol. 59 : 593 604.
54. Taylor, M.I., Rüber, L. Verheyen, R. 2001. Microsatellites reveal high levels of population substructuring in the species-poor Eretmodine cichlid lineage from Lake Tanganyika. Proc. R. Soc. B 268 : 803 808.
55. Walter, R.P., Ovenden, J.R. Heath, D.D. 2007. Characterization of four tetranucleotide and six dinucleotide microsatellite markers for use in Telmatherina antoniae and related species. Mol. Ecol. Notes 7 : 651 653.
56. Ward, R.D. Elliot, N.G. 2001. Genetic population structure of species in the South East Fishery of Australia. Mar. Freshw. Res. 52 : 563 573.
57. Weir, B.S. Cockerham, C.C. 1984. Estimating F-statistics for the analysis of population structure. Evolution 38 : 1358 1370.
58. Wong, B.B.M., Keogh, J.S. McGlashan, D.J. 2004. Current and historical patterns of drainage connectivity in eastern Australia inferred from population genetic structuring in a widespread freshwater fish Pseudomugil signifer (Pseudomugilidae). Mol. Ecol. 13 : 391 401.