Use of hidden correlations in short oligonucleotide array data are insufficient for accurate quantification of nucleic acid targets in complex target mixtures

Journal of Microbiological Methods

Volumn 76, Issue 2, 2009, Pages 188-195

  Rule, Rebecca A ^a   Pozhitkov, Alex E ^b   Noble, Peter A ^a  

^a UNIVERSITY OF WASHINGTON   (United States)

^b UNIVERSITY OF SOUTHERN MISSISSIPPI   (United States)

Author keywords

Cross hybridization; Free energy; Microbial ecology; Nonspecific hybridizations; Oligonucleotide arrays; Optimization algorithm; rRNA

Indexed keywords

NUCLEIC ACID; RIBOSOME RNA;

ACCURACY; ARTICLE; BINDING AFFINITY; COMPLEX FORMATION; CONTROLLED STUDY; CORRELATION ANALYSIS; CROSS HYBRIDIZATION; DNA MICROARRAY; DNA PROBE; DNA SEQUENCE; GENE TARGETING; LATIN SQUARE DESIGN; MICROARRAY ANALYSIS; MICROBIAL COMMUNITY; ORGANISM COMMUNITY; PRIORITY JOURNAL; QUANTITATIVE ASSAY; RNA SEQUENCE; SEQUENCE HOMOLOGY; SIGNAL DETECTION;

ALGORITHMS; NUCLEIC ACID HYBRIDIZATION; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; REPRODUCIBILITY OF RESULTS; RNA, RIBOSOMAL, 16S; RNA, RIBOSOMAL, 23S; SENSITIVITY AND SPECIFICITY;

EID: 58349107641     PISSN: 01677012     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mimet.2008.10.011     Document Type: Article

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