Two evolutionarily conserved sequence elements for Peg3/Usp29 transcription

BMC Molecular Biology

Volumn 9, Issue , 2008, Pages

  Kim, Jeong Do ^a   Yu, Sungryul ^a   Choo, Jung Ha ^a   Kim, Joomyeong ^a  

^a LOUISIANA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GENE PRODUCT; PATERNALLY EXPRESSED GENE 3; UBIQUITIN SPECIFIC PROTEASE 29; UNCLASSIFIED DRUG; KRUPPEL LIKE FACTOR; PEG3 PROTEIN, MOUSE; PROTEINASE; TRANSCRIPTION FACTOR YY1; UBIQUITIN SPECIFIC PROTEASE; UBIQUITIN-SPECIFIC PROTEASE;

ANIMAL CELL; ARTICLE; BINDING SITE; CELL STRAIN 3T3; CONTROLLED STUDY; CPG ISLAND; GENE MUTATION; GENE REPRESSION; GENETIC CONSERVATION; GENOME IMPRINTING; GENOME SIZE; HELA CELL; HUMAN; HUMAN CELL; MOLECULAR EVOLUTION; MOUSE; MUTATIONAL ANALYSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PROMOTER REGION; PROTEIN FUNCTION; SEQUENCE ANALYSIS; TRANSCRIPTION REGULATION; UNINDEXED SEQUENCE; ANIMAL; ENHANCER REGION; GENE EXPRESSION REGULATION; GENE ORDER; GENETICS; METABOLISM; MOLECULAR GENETICS; TRANSCRIPTION INITIATION;

3T3 CELLS; ANIMALS; BASE SEQUENCE; BINDING SITES; CONSERVED SEQUENCE; ENDOPEPTIDASES; ENHANCER ELEMENTS, GENETIC; EVOLUTION, MOLECULAR; GENE EXPRESSION REGULATION; GENE ORDER; HELA CELLS; HUMANS; KRUPPEL-LIKE TRANSCRIPTION FACTORS; MICE; MOLECULAR SEQUENCE DATA; TRANSCRIPTIONAL ACTIVATION; YY1 TRANSCRIPTION FACTOR;

EID: 58149492968     PISSN: None     EISSN: 14712199     Source Type: Journal    
DOI: 10.1186/1471-2199-9-108     Document Type: Article

References (19)

1. Kuroiwa Y Kaneko-Ishino T Kagitani F Kohda T Li LL Tada M Suzuki R Yokoyama M Shiroishi T Wakana S et al. Peg3 imprinted gene on proximal chromosome 7 encodes for a zinc finger protein Nat Genet 1996, 12(2):186-190. 10.1038/ng0296-186 8563758
2. Kim J Ashworth L Branscomb E Stubbs L The human homolog of a mouse-imprinted gene, Peg3, maps to a zinc finger gene-rich region of human chromosome 19q13.4 Genome Res 1997, 7(5):532-540. 310658 9149948
3. Kim J Noskov VN Lu X Bergmann A Ren X Warth T Richardson P Kouprina N Stubbs L Discovery of a novel, paternally expressed ubiquitin-specific processing protease gene through comparative analysis of an imprinted region of mouse chromosome 7 and human chromosome 19q13.4 Genome Res 2000, 10(8):1138-1147. 310910 10958632 10.1101/gr.10.8.1138
4. Li L Keverne EB Aparicio SA Ishino F Barton SC Surani MA Regulation of maternal behavior and offspring growth by paternally expressed Peg3 Science 1999, 284(5412):330-333. 10.1126/science.284.5412.330 10195900
5. Relaix F Wei Xj Li W Pan J Lin Y Bowtell DD Sassoon DA Wu X Pw1/Peg3 is a potential cell death mediator and cooperates with Siah1a in p53-mediated apoptosis Proc Natl Acad Sci USA 2000, 97(5):2105-2110. 15761 10681424 10.1073/pnas.040378897
6. Deng Y Wu X Peg3/Pw1 promotes p53-mediated apoptosis by inducing Bax translocation from cytosol to mitochondria Proc Natl Acad Sci USA 2000, 97(22):12050-12055. 17292 11050235 10.1073/pnas.97.22.12050
7. Li LL Szeto IY Cattanach BM Ishino F Surani MA Organization and parent-of-origin-specific methylation of imprinted Peg3 gene on mouse proximal chromosome 7 Genomics 2000, 63(3):333-340. 10.1006/ geno.1999.6103 10704281
8. Lucifero D Mertineit C Clarke HJ Bestor TH Trasler JM Methylation dynamics of imprinted genes in mouse germ cells Genomics 2002, 79(4):530-538. 10.1006/geno.2002.6732 11944985
9. Kim J Kollhoff A Bergmann A Stubbs L Methylation-sensitive binding of transcription factor YY1 to an insulator sequence within the paternally expressed imprinted gene, Peg3 Hum Mol Genet 2003, 12(3):233-245. 10.1093/hmg/ddg028 12554678
10. Hark AT Schoenherr CJ Katz DJ Ingram RS Levorse JM Tilghman SM CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/ Igf2 locus Nature 2000, 405:486-489. 10.1038/35013106 10839547
11. Takada S Paulsen M Tevendale M Tsai C-E Kelsey G Cattanach BM Ferguson-Smith AC Epigenetic analysis of the Dlk1-Gtl2 imprinted domain on mouse chromosome 12: Implications for imprinting control from comparison with Igf2-H19 Hum Mol Genet 2002, 11(1):77-86. 10.1093/hmg/ 11.1.77 11773001
12. Kim J Multiple YY1 and CTCF binding sites in imprinting control regions Epigenetics 2008, 3(3):115-118. 18458536
13. Kim JD Hinz AK Bergmann A Huang JM Ovcharenko I Stubbs L Kim J Identification of clustered YY1 binding sites in imprinting control regions Genome Res 2006, 16(7):901-911. 1484457 16760423 10.1101/ gr.5091406
14. Kim JD Hinz AK Choo JH Stubbs L Kim J YY1 as a controlling factor for the Peg3 and Gnas imprinted domains Genomics 2007, 89(2):262-269. 1828871 17067777 10.1016/j.ygeno.2006.09.009
15. Kim J Kim JD In vivo YY1 knockdown effects on genomic imprinting Hum Mol Genet 2008, 17(3):391-401. 10.1093/hmg/ddm316 17977899
16. Song J Lu Y Giang A Pang S Chiu R Promoter analysis of the mouse Peg3 gene Biochim Biophys Acta 2008, 1779(2):134-138. 18068135
17. Relaix F Weng X Marazzi G Yang E Copeland N Jenkins N Spence SE Sassoon D Pw1, a novel zinc finger gene implicated in the myogenic and neuronal lineages Dev Biol 1996, 177(2):383-396. 10.1006/dbio.1996.0172 8806818
18. Yamaguchi A Taniguchi M Hori O Ogawa S Tojo N Matsuoka N Miyake S-i Kasai K Sugimoto H Tamatani M et al. Peg3/Pw1 is involved in p53-mediated cell death pathway in brain ischemia/hypoxia J Biol Chem 2002, 277(1):623-629. 10.1074/jbc.M107435200 11679586
19. Mountford P Zevnik B Duwel A Nichols J Li M Dani C Robertson M Chambers I Smith A Dicistronic targeting constructs: Reporters and modifiers of mammalian gene expression Proc Natl Acad Sci USA 1994, 91(10):4303-4307. 43773 8183905 10.1073/pnas.91.10.4303