Discovery of a novel, paternally expressed ubiquitin-specific processing protease gene through comparative analysis of an imprinted region of mouse chromosome 7 and human chromosome 19q13.4

Genome Research

Volumn 10, Issue 8, 2000, Pages 1138-1147

  Kim, Joomyeong ^a,b   Noskov, Vladimir N ^c   Lu, Xiaochen ^a   Bergmann, Anne ^a   Ren, Xiaojia ^a   Warth, Tiffany ^a   Richardson, Paul ^b   Kouprina, Natalya ^c   Stubbs, Lisa ^a,b  

^a LAWRENCE LIVERMORE NATIONAL LABORATORY   (United States)

^b DOE JOINT GENOME INSTITUTE   (United States)

^c NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; COMPLEMENTARY DNA; HYDROLASE; PROTEINASE; UBIQUITIN; UBIQUITIN PROTEIN LIGASE;

ALLELE; ARTICLE; BRAIN CORTEX; CHROMOSOME 19Q; CHROMOSOME 7; COMPARATIVE STUDY; CONTROLLED STUDY; EMBRYO; EXON; FACE; FOREBRAIN; GENE EXPRESSION; GENE LOCATION; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC CODE; GENETIC CONSERVATION; GENETIC TRANSCRIPTION; GENOME IMPRINTING; HIPPOCAMPUS; HUMAN; LIMB BUD; MOLECULAR CLONING; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; ORIENTATION; PRIORITY JOURNAL;

AMINO ACID SEQUENCE; ANIMALS; BLOTTING, NORTHERN; CHROMOSOMES, HUMAN, PAIR 19; ENDOPEPTIDASES; FEMALE; GENE EXPRESSION REGULATION; GENOMIC IMPRINTING; HUMANS; IN SITU HYBRIDIZATION; MALE; MICE; MICE, INBRED C3H; MOLECULAR SEQUENCE DATA; PROTEIN PROCESSING, POST-TRANSLATIONAL; RATS; SEQUENCE HOMOLOGY, AMINO ACID; SEQUENCE HOMOLOGY, NUCLEIC ACID; SUBSTRATE SPECIFICITY; UBIQUITINS;

EID: 0033824287     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.10.8.1138     Document Type: Article

References (39)

1. Gametic imprinting in mammals
2. Competition - A common motif for the imprinting mechanism?
3. Genomic imprinting in mammals
4. Genetic imprinting map
5. Imprint switching on human chromosome 15 may involve alternative transcripts of the SNRPN gene
6. Mutations in the Cacnl1a4 calcium channel gene are associated with seizures, cerebellar degeneration, and ataxia in tottering and leaner mutant mice
7. Human-mouse differences in the embryonic expression patterns of developmental control genes and disease genes
8. Rapid production of full-length cDNAs from rare transcripts: Amplification using a single gene-specific oligonucleotide primer
9. Imprinted genes have few and small introns
10. A novel imprinted gene, encoding a RING zinc-finger protein, and overlapping antisense transcript in the Prader-Willi syndrome critical region
11. The human homolog of a mouse-imprinted gene, Peg3, maps to a zinc finger gene-rich region of human chromosome 19q13.4
12. Exon sharing of a novel human zinc-finger gene, ZIM2, and paternally expressed gene 3 (PEG3)
13. Amplification and sequencing of end fragments from bacterial artificial chromosome clones by single-primer polymerase chain reaction
14. Zim1, a maternally expressed mouse Kruppel-type zinc-finger gene located in proximal chromosome 7
15. UBE3A/E6-AP mutations cause Angelman syndrome
16. Evolutionary changes in sites and timing of actin gene expression in embryos of the direct- and indirect-developing sea urchins, Heliocidaris erythrogramma and H. tuberculata
17. Peg3 imprinted gene on proximal chromosome 7 encodes for a zinc finger protein
18. Specific cloning of human DNA as yeast artificial chromosomes by transformation-associated recombination
19. Human KVLQT1 gene shows tissue-specific imprinting and encompasses Beckwith-Wiedemann syndrome chromosomal rearrangements
20. Abnormal maternal behaviour and growth retardation associated with loss of the imprinted gene Mest
21. Regulation of maternal behavior and offspring growth by paternally expressed Peg3
22. Organization and Parent-of-origin-specific methylation of imprinted peg3 gene on mouse proximal chromosome 7
23. Multiple imprinted sense and antisense transcripts, differential methylation and tandem repeats in a putative imprinting control region upstream of mouse Igf2
24. A catalogue of imprinted genes and parent-of-origin effects in humans and animals
25. New insights reveal complex mechanisms involved in genomic imprinting
26. Imprinting in Prader-Willi and Angelman syndromes
27. Imprinting in clusters: Lessons from Beckwith-Wiedemann syndrome
28. Screening large-insert libraries by hybridization
29. An imprinted antisense RNA overlaps UBE3A and a second maternally expressed transcript
30. Genome imprinting phenomena on mouse chromosome 7
31. The origin of interspersed repeats in the human genome
32. The hox-5 and surfeit gene clusters are linked in the proximal portion of mouse chromosome 2
33. Competitive edge at the imprinted Prader-Willi/Angelman region?
34. The sins of the fathers and mothers: Genomic imprinting in mammalian development
35. Evolutionary changes in the expression pattern of a developmentally essential gene in three Drosophila species
36. Regulation of ubiquitin-dependent processes by deubiquitinating enzymes
37. Imprinted expression of the Igf2r gene depends on an intronic CpG island