Taxonomy of the Hypnum cupressiforme complex in Italy based on ITS and trnL sequences and ISSR markers

Journal of Bryology

Volumn 30, Issue 4, 2008, Pages 283-289

  Spagnuolo, Valeria ^a   Terracciano, Stefano ^a   Cobianchi, Rosa Castaldo ^b   Giordano, Simonetta ^a  

^a UNIVERSITY OF NAPLES FEDERICO II   (Italy)

^b Dipartimento di Biologia Vegetale   (Italy)

Author keywords

Genetic variation; Hypnum; ISSR; ITS and trnL sequences; Mosses; Species concept

Indexed keywords

BRYOPHYTA; BRYOPHYTES; HYPNUM; HYPNUM CUPRESSIFORME; HYPNUM JUTLANDICUM;

EID: 58149260207     PISSN: 03736687     EISSN: None     Source Type: Journal    
DOI: 10.1179/174328208X300750     Document Type: Article

References (44)

1. Agapow PM, Burt A. 2001. Indices of multilocus linkage disequilibrium. Molecular Ecology Notes 1: 101-102.
2. Ando H. 1992. Studies on the genus Hypnum Hedw. (VIII). Hikobia 11: 111-123.
3. Archibald JK, Mort ME, Crawford DJ, Santos-Guerra A. 2006. Evolutionary relationships within recently radiated taxa: comments on methodology and analysis of inter-simple sequence repeat data and other hypervariable, dominant markers. Taxon 55: 747-756.
4. Baldwin B. 1992. Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: An example from the Compositae. Molecular Phylogenetics and Evolution 1: 3-16.
5. Cortini Pedrotti C. 2006. Flora dei muschi d'Italia (II parte). Antonio Delfino (ed.), Roma, Italy.
6. Draper I, Hedenäs L, Grimm GW. 2007. Molecular and morphological incongruence in European species of Isothecium (Bryophyta). Molecular Phylogenetics and Evolution 42: 700-716.
7. Excoffier L, Laval G, Schneider S. 2005. Arlequin ver 3.1. An integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online 1: 47-50.
8. Frahm J.-P. 1995. Die Moos- und Farnpflanzen Europas. In: Frey F, Frahm J.-P, Fischer E, Lobin W. Kleine Kryptogamenflora. Band IV. Stuttgart: Gustav Fischer Verlag.
9. Gunnarsson U, Hassel K, Söderström L. 2005. Genetic structure of the endangered peat moss Sphagnum angermanicum in Sweden: a result of historic or contemporary processes? The Bryologist 108: 194-203.
10. Hao G, Lee DH, Lee JS, Lee NS. 2002. A study of taxonomical relationships among species of Korean Allium Sec. Sacculiferum (Alliaceae) and related species using inter-simple sequence repeat (ISSR) markers. Botanical Bulletin of Academia Sinica 43: 63-68.
11. Hedenäs L, Eldenäs P. 2008. Relationship in Scorpidium (Calliergonaceae, Bryophyta), especially between S. cossonii and S. scorpioides. Taxon 57: 121-130.
12. Hedwig J. 1801. Species Muscorum Frondosorum. Leipzig (1960 reprint, Codicote: Wheldon & Wesley).
13. Heinrichs J, Gradstein SR, Groth H, Lindner M. 2003. Plagiochila cucullifolia var. anomala var. nov. from Ecuador, with notes on discordant molecular and morphological variation in Plagiochila. Plant Systematics and Evolution 242: 205-216.
14. Holyoak DT, Pedersen N. 2007. Conflicting molecular and morphological evidence of evolution within the Bryaceae (Bryopsida) and its implications for generic taxonomy. Journal of Bryology 29: 111-124.
15. Longton RE, Hedderson TA. 2000. What are rare species and why conserve them? Lindbergia 25: 53-61.
16. Newton AE, Cox CJ, De Luna E, Hedenäs L. 2000. Evolutionary radiation of the pleurocarpous mosses: phylogenetic analyses incorporating morphological characters with rbcL, rps4 and trnL- trnF sequence data (abstract). American Journal of Botany 87: 12.
17. Nyholm E. 1965. Illustrated moss flora of Fennoscandia. Fascicle 5. Lund: Gleerup.
18. Pedersen N, Cox JC, Hedenäs L. 2003. Phylogeny of the moss family Bryaceae inferred from chloroplast DNA sequences and morphology. Systematic Botany 28: 471-482.
19. Podani J. 2001. Syn-Tax 2000. Computer Programs for Data Analysis in Ecology and Systematics. Budapest: Scientia Publishing.
20. Quandt D, Frahm J.-P, Frey W. 2001. Patterns of molecular divergence within the palaeoaustral genus Weymouthia Broth. (Lembophyllaceae, Bryopsida). Journal of Bryology 23: 305-311.
21. Ryall K, Whitton J, Schofield W, Shona E, Shaw JA. 2005. Molecular phylogenetic study of interspecific variation in the moss Isothecium (Brachytheciaceae). Sysematic Botany 30: 242-247.
22. Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4: 406-425.
23. Shaw AJ. 2000. Molecular phylogeography and cryptic speciation in the mosses, Mielichhoferia elongata and Mielichhoferia mielichhoferiana (Bryaceae). Molecular Ecology 9: 595-608.
24. Shaw AJ. 2001. Biogeographic patterns and cryptic speciation in bryophytes. Journal of Biogeography 28: 253-261.
25. Shaw AJ, Allen BH. 2000. Phylogenetic relationships, morphological incongruence, and geographic speciation in the Fontinalaceae (Bryophyta), Molecular Phylogenetics and Evolution 16: 225-237.
26. Shaw AJ, Cox CJ, Goffinet B. 2005. Global patterns of moss diversity: taxonomic and molecular inferences. Taxon 54: 337-352.
27. Shaw AJ, Cox CJ, Goffinet B, Buck WR, Boles SB. 2003. Phylogenetic evidence of a rapid radiation of pleurocarpus mosses (Bryophyta). Evolution 57: 2226-2241.
28. Shaw AJ, McDaniel SE, Werner O, Ros RM. 2002. Phylogeography and phylodemography. The Bryologist 105: 373-383.
29. Shaw AJ, Melosik I, Cox CJ, Boles SB. 2005. Divergent and reticulate evolution in closely related species of Sphagnum section Subsecunda. The Bryologist 108: 363-376.
30. Skotnicki ML, Mackenzie AM, Ninham JA, Selkirk PM. 2004. High levels of genetic variability in the moss Ceratodon purpureus from continental Antarctica, subantarctic Heard and Macquarie Islands, and Australasia. Polar Biology 27: 687-698.
31. Smith AJE. 1978. The Moss Flora of Britain and Ireland. Cambridge: Cambridge University Press.
32. Smith AJE. 1997. The Hypnum cupressiforme complex in the British Isles. Journal of Bryology 19: 751-774.
33. Smith AJE. 2004. The Moss Flora of Britain and Ireland (second edition). Cambridge: Cambridge University Press.
34. Spagnuolo V, Caputo P, Cozzolino S, Castaldo R, De Luca P. 1999. Patterns of relationships in Trichostomoideae (Pottiaceae, Musci). Plant Systematics and Evolution 216: 69-79.
35. Spagnuolo V, Muscariello L, Cozzolino S, Castaldo Cobianchi R, Giordano S. 2007a. Ubiquitous genetic diversity in ISSR markers between and within populations of the asexually producing moss Pleurochaete squarrosa. Plant Ecology 188: 91-101.
36. Spagnuolo V, Muscariello L, Terracciano S, Giordano S. 2007b. Molecular biodiversity in the moss Leptodon smithii (Neckeraceae), in relation to habitat disturbance and fragmentation. Journal of Plant Research 120: 595-604.
37. Taberlet P, Gielly L, Patou G, Bouvet J. 1991. Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Molecular Biology 17: 1105-1109.
38. Thompson JD, Higgins DG, Gibson TJ. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Research 22: 4673-4680.
39. Touw A, Rubers WV. 1989. De Nederlandse Bladmossen. Utrecht: Stichting Uitgeverji KNNV.
40. Vanderpoorten A, Hedenäs L, Cox CJ, Shaw JA. 2002. Phylogeny and morphological evolution of the Amblystegiaceae (Bryopsida). Molecular Phylogenetics and Evolution 23: 1-21.
41. Vanderpoorten A, Hedenäs L, Jacquemart AL. 2003. Differentiation in DNA fingerprinting and morphology among species of the pleurocarpous moss genus, Rhytidiadelphus (Hylocomiaceae). Taxon 52: 229-236.
42. Watson EV. 1981. British Mosses and Liverworts. 3rd edn. Cambridge: Cambridge University Press.
43. Yockteng R, Ballard Jr HE, Mansion G, Dajoz I, Nadot S. 2003. Relationships among pansies (Viola section Melanium) investigated using ITS and ISSR markers. Plant Systematics and Evolution 241: 153-170.
44. Yokota Y, Kawata T, Iida Y, Kato A, Tanifuji S. 1989. Nucleotide sequences of the 5.8S rRNA gene and internal transcribed spacer regions in carrot and broad bean ribosomal DNA. Journal of molecular Evolution 29: 294-301.