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Volumn 55, Issue 3, 2006, Pages 747-756

Evolutionary relationships within recently radiated taxa: Comments on methodology and analysis of inter-simple sequence repeat data and other hypervariable, dominant markers

Author keywords

Arbitrarily amplified DNA (AAD); Dominant marker; Inter simple sequence repeat (ISSR); Neighbor joining; Parsimony; Phylogeny

Indexed keywords

ANALYTICAL METHOD; BIOMARKER; DATA SET; DNA; EVOLUTIONARY BIOLOGY; METHODOLOGY; PHYLOGENETICS; POLYMERASE CHAIN REACTION; RECONSTRUCTION;

EID: 33749539111     PISSN: 00400262     EISSN: None     Source Type: Journal    
DOI: 10.2307/25065648     Document Type: Article
Times cited : (18)

References (79)
  • 1
    • 14244260831 scopus 로고    scopus 로고
    • Hybridization and gene flow between a day- and night-flowering species of Zaluzianskya (Scrophulariaceae s.s., tribe Manuleeae)
    • Archibald, J. K., Wolfe, A. D. & Johnson, S. D. 2004. Hybridization and gene flow between a day- and night-flowering species of Zaluzianskya (Scrophulariaceae s.s., tribe Manuleeae). Amer. J. Bot. 91: 1333-1344.
    • (2004) Amer. J. Bot. , vol.91 , pp. 1333-1344
    • Archibald, J.K.1    Wolfe, A.D.2    Johnson, S.D.3
  • 2
    • 33749555430 scopus 로고    scopus 로고
    • The utility of automated analysis of inter-simple sequence repeat (ISSR) loci for resolving relationships in the Canary island species of Tolpis (Asteraceae)
    • In press
    • Archibald, J. K., Crawford, D. J., Santos-Guerra, A. & Mort, M. E. In press. The utility of automated analysis of inter-simple sequence repeat (ISSR) loci for resolving relationships in the Canary island species of Tolpis (Asteraceae). Amer. J. Bot.
    • Amer. J. Bot.
    • Archibald, J.K.1    Crawford, D.J.2    Santos-Guerra, A.3    Mort, M.E.4
  • 4
    • 1342330129 scopus 로고    scopus 로고
    • Using RAPDs to identify DNA sequence loci for species level phylogeny reconstruction: An example from Leucaena (Fabaceae)
    • Bailey, C. D., Hughes, C. E. & Harris, S. A. 2004. Using RAPDs to identify DNA sequence loci for species level phylogeny reconstruction: An example from Leucaena (Fabaceae). Syst. Bot. 29: 4-14.
    • (2004) Syst. Bot. , vol.29 , pp. 4-14
    • Bailey, C.D.1    Hughes, C.E.2    Harris, S.A.3
  • 5
    • 0344848555 scopus 로고    scopus 로고
    • Inter-simple sequence repeat (ISSR) amplification for analysis of microsatellite motif frequency and fingerprinting in rice (Oryza sativa L.)
    • Blair, M. W., Panaud, O. & McCouch, S. R. 1999. Inter-simple sequence repeat (ISSR) amplification for analysis of microsatellite motif frequency and fingerprinting in rice (Oryza sativa L.). Theor. Appl. Genet. 98: 780-792.
    • (1999) Theor. Appl. Genet. , vol.98 , pp. 780-792
    • Blair, M.W.1    Panaud, O.2    McCouch, S.R.3
  • 6
    • 20444484567 scopus 로고    scopus 로고
    • Genetic diversity in Crambe maritima along the English Channel: The role of ocean currents in determining population structure
    • Bond, J. M., Daniels, R. & Bioret, F. 2005. Genetic diversity in Crambe maritima along the English Channel: the role of ocean currents in determining population structure. Ecography 28: 374-384.
    • (2005) Ecography , vol.28 , pp. 374-384
    • Bond, J.M.1    Daniels, R.2    Bioret, F.3
  • 7
    • 0035603356 scopus 로고    scopus 로고
    • Nonanchored inter simple sequence repeat (ISSR) markers: Reproducible and specific tools for genome fingerprinting
    • Bornet, B. & Branchard, M. 2001. Nonanchored inter simple sequence repeat (ISSR) markers: Reproducible and specific tools for genome fingerprinting. Plant Molec. Biol. Rep. 19: 209-215.
    • (2001) Plant Molec. Biol. Rep. , vol.19 , pp. 209-215
    • Bornet, B.1    Branchard, M.2
  • 8
  • 9
    • 0000116740 scopus 로고
    • A method for deducing branching sequences in phylogeny
    • Camin, J. H. & Sokal, R. R. 1965. A method for deducing branching sequences in phylogeny. Evolution 19: 311-326.
    • (1965) Evolution , vol.19 , pp. 311-326
    • Camin, J.H.1    Sokal, R.R.2
  • 11
    • 6344270376 scopus 로고    scopus 로고
    • Single-locus molecular markers for inferring relationships at lower taxonomic levels: Observations and comments
    • Crawford, D. J. & Mort, M. E. 2004. Single-locus molecular markers for inferring relationships at lower taxonomic levels: observations and comments. Taxon 53: 631-635.
    • (2004) Taxon , vol.53 , pp. 631-635
    • Crawford, D.J.1    Mort, M.E.2
  • 12
    • 0003080994 scopus 로고
    • Cladistic analysis of restriction endonuclease cleavage maps within a maximum-likelihood framework
    • DeBry, R. W. & Slade, N. A. 1985. Cladistic analysis of restriction endonuclease cleavage maps within a maximum-likelihood framework. Syst. Zool. 34: 21-34.
    • (1985) Syst. Zool. , vol.34 , pp. 21-34
    • Debry, R.W.1    Slade, N.A.2
  • 13
    • 0242276987 scopus 로고    scopus 로고
    • Identifying lychee (Litchi chinensis Sonn.) cultivars and their genetic relationships using intersimple sequence repeat (ISSR) markers
    • Degani, C., Deng, J. S., Beiles, A., El-Batsri, R., Goren, M. & Gazit, S. 2003. Identifying lychee (Litchi chinensis Sonn.) cultivars and their genetic relationships using intersimple sequence repeat (ISSR) markers. J. Amer. Soc. Hortic. Sci. 128: 838-845.
    • (2003) J. Amer. Soc. Hortic. Sci. , vol.128 , pp. 838-845
    • Degani, C.1    Deng, J.S.2    Beiles, A.3    El-Batsri, R.4    Goren, M.5    Gazit, S.6
  • 14
    • 0000250265 scopus 로고
    • Measures of the amount of ecological association between species
    • Dice, L. R. 1945. Measures of the amount of ecological association between species. Ecology 26: 297-302.
    • (1945) Ecology , vol.26 , pp. 297-302
    • Dice, L.R.1
  • 15
    • 0002961018 scopus 로고    scopus 로고
    • Nucleic acids III: Analysis of fragments and restriction sites
    • Hillis, D. M., Mortiz, C. & Mable, B. K. (eds.), Sinauer Associates Inc., Sunderland
    • Dowling, T. E., Moritz, C., Palmer, J. D. & Rieseberg, L. H. 1996. Nucleic acids III: Analysis of fragments and restriction sites. Pp. 249-320 in: Hillis, D. M., Mortiz, C. & Mable, B. K. (eds.), Molecular Systematics. Sinauer Associates Inc., Sunderland.
    • (1996) Molecular Systematics , pp. 249-320
    • Dowling, T.E.1    Moritz, C.2    Palmer, J.D.3    Rieseberg, L.H.4
  • 16
    • 0345411509 scopus 로고    scopus 로고
    • Comparison of similarity coefficients based on RAPD markers in the common bean
    • Duarte, J. M., dos Santos, J. B. & Melo, L. C. 1999. Comparison of similarity coefficients based on RAPD markers in the common bean. Genet. Molec. Biol. 22: 427-432.
    • (1999) Genet. Molec. Biol. , vol.22 , pp. 427-432
    • Duarte, J.M.1    Dos Santos, J.B.2    Melo, L.C.3
  • 17
    • 0032904045 scopus 로고    scopus 로고
    • Clonal diversity in the rare Calamagrostis porteri ssp. insperata (Poaceae): Comparative results for allozymes and random amplified polymorphic DNA (RAPD) and intersimple sequence repeat (ISSR) markers
    • Esselman, E. J., Jianqiang, L., Crawford, D. J., Windus, J. L. & Wolfe, A. D. 1999. Clonal diversity in the rare Calamagrostis porteri ssp. insperata (Poaceae): comparative results for allozymes and random amplified polymorphic DNA (RAPD) and intersimple sequence repeat (ISSR) markers. Molec. Ecol. 8: 443-451.
    • (1999) Molec. Ecol. , vol.8 , pp. 443-451
    • Esselman, E.J.1    Jianqiang, L.2    Crawford, D.J.3    Windus, J.L.4    Wolfe, A.D.5
  • 18
    • 84959795073 scopus 로고
    • Phylogenetic analysis under Dollo's law
    • Farris, J. S. 1977. Phylogenetic analysis under Dollo's law. Syst. Zool. 26: 77-88.
    • (1977) Syst. Zool. , vol.26 , pp. 77-88
    • Farris, J.S.1
  • 20
    • 0003437299 scopus 로고    scopus 로고
    • Distributed by the author. Department of Genome Sciences, Univ. Washington, Seattle, Washington, U.S.A.
    • Felsenstein, J. 2004. PHYLIP (phylogeny inference package), vers. 3.6. Distributed by the author. Department of Genome Sciences, Univ. Washington, Seattle, Washington, U.S.A.
    • (2004) PHYLIP (Phylogeny Inference Package), Vers. 3.6
    • Felsenstein, J.1
  • 21
    • 17844389612 scopus 로고    scopus 로고
    • Strong genetic differentiation of the East-Himalayan Megacodon stylophorus (Gentianaceae) detected by Inter-Simple Sequence Repeats (ISSR)
    • Ge, X. J., Zhang, L. B., Yuan, Y. M., Hao, G. & Chiang, T. Y. 2005. Strong genetic differentiation of the East-Himalayan Megacodon stylophorus (Gentianaceae) detected by Inter-Simple Sequence Repeats (ISSR). Biodiv. Cons. 14: 849-861.
    • (2005) Biodiv. Cons. , vol.14 , pp. 849-861
    • Ge, X.J.1    Zhang, L.B.2    Yuan, Y.M.3    Hao, G.4    Chiang, T.Y.5
  • 22
    • 14844350809 scopus 로고    scopus 로고
    • Assessment of inter simple sequence repeat markers to differentiate sympatric wild and domesticated populations of common bean
    • Gonzalez, A., Wong, A., Delgado-Salinas, A., Papa, R. & Gepts, P. 2005. Assessment of inter simple sequence repeat markers to differentiate sympatric wild and domesticated populations of common bean. Crop Sci. 45: 606-615.
    • (2005) Crop Sci. , vol.45 , pp. 606-615
    • Gonzalez, A.1    Wong, A.2    Delgado-Salinas, A.3    Papa, R.4    Gepts, P.5
  • 23
  • 24
    • 0027722962 scopus 로고
    • Phylogenetic analysis of restriction site data
    • Zimmer, E. A., Cann, R. L., White, T. J. & Wilson, A. C. (eds.), Academic Press Inc, San Diego
    • Holsinger, K. E. & Jansen, R. K. 1993. Phylogenetic analysis of restriction site data. Pp. 439-455 in: Zimmer, E. A., Cann, R. L., White, T. J. & Wilson, A. C. (eds.), Molecular Evolution: Producing the Biochemical Data. Academic Press Inc, San Diego.
    • (1993) Molecular Evolution: Producing the Biochemical Data , pp. 439-455
    • Holsinger, K.E.1    Jansen, R.K.2
  • 25
    • 0034043081 scopus 로고    scopus 로고
    • Fluorescein PAGE analysis of microsatellite-primed PCR: A fast and efficient approach for genomic fingerprinting
    • Huang, J. & Sun, M. 2000. Fluorescein PAGE analysis of microsatellite-primed PCR: a fast and efficient approach for genomic fingerprinting. Biotechniques 28: 1068-1072.
    • (2000) Biotechniques , vol.28 , pp. 1068-1072
    • Huang, J.1    Sun, M.2
  • 26
    • 0036065546 scopus 로고    scopus 로고
    • Divergent and reticulate species relationships in Leucaena (Fabaceae) inferred from multiple data sources: Insights into polyploid origins and nrDNA polymorphism
    • Hughes, C. E., Bailey, C. D. & Harris, S. A. 2002. Divergent and reticulate species relationships in Leucaena (Fabaceae) inferred from multiple data sources: insights into polyploid origins and nrDNA polymorphism. Amer. J. Bot. 89: 1057-1073.
    • (2002) Amer. J. Bot. , vol.89 , pp. 1057-1073
    • Hughes, C.E.1    Bailey, C.D.2    Harris, S.A.3
  • 27
    • 0000210258 scopus 로고
    • Nouvelles recherches sur la distribution florale
    • Jaccard, P. 1908. Nouvelles recherches sur la distribution florale. Bull. Soc. Vaud. Sci. Nat. 44: 223-270.
    • (1908) Bull. Soc. Vaud. Sci. Nat. , vol.44 , pp. 223-270
    • Jaccard, P.1
  • 28
    • 0033916763 scopus 로고    scopus 로고
    • Genetic diversity and phylogenetic relationship as revealed by inter simple sequence repeat (ISSR) polymorphism in the genus Oryza
    • Joshi, S. P., Gupta, V. S., Aggarwal, R. K., Ranjekar, P. K. & Brar, D. S. 2000. Genetic diversity and phylogenetic relationship as revealed by inter simple sequence repeat (ISSR) polymorphism in the genus Oryza. Theor. Appl. Genet. 100: 1311-1320.
    • (2000) Theor. Appl. Genet. , vol.100 , pp. 1311-1320
    • Joshi, S.P.1    Gupta, V.S.2    Aggarwal, R.K.3    Ranjekar, P.K.4    Brar, D.S.5
  • 29
    • 0000337979 scopus 로고
    • The accuracy of phylogenetic estimation using the neighbor-joining method
    • Kim, J., Rohlf, F. J. & Sokal, R. R. 1993. The accuracy of phylogenetic estimation using the neighbor-joining method. Evolution 47: 471-486.
    • (1993) Evolution , vol.47 , pp. 471-486
    • Kim, J.1    Rohlf, F.J.2    Sokal, R.R.3
  • 30
    • 0029823561 scopus 로고    scopus 로고
    • A common origin for woody Sonchus and five related genera in the Macaronesian islands: Molecular evidence for extensive radiation
    • Kim, S. C., Crawford, D. J., Francisco-Ortega, J. & Santos-Guerra, A. 1996. A common origin for woody Sonchus and five related genera in the Macaronesian islands: Molecular evidence for extensive radiation. Proc. Natl. Acad. Sci. U.S.A. 93: 7743-7748.
    • (1996) Proc. Natl. Acad. Sci. U.S.A. , vol.93 , pp. 7743-7748
    • Kim, S.C.1    Crawford, D.J.2    Francisco-Ortega, J.3    Santos-Guerra, A.4
  • 31
    • 19044389258 scopus 로고    scopus 로고
    • Phylogenetic signal in AFLP data sets
    • Koopman, W. J. M. 2005. Phylogenetic signal in AFLP data sets. Syst. Biol. 54: 197-217.
    • (2005) Syst. Biol. , vol.54 , pp. 197-217
    • Koopman, W.J.M.1
  • 32
    • 0000913844 scopus 로고    scopus 로고
    • Species relationships in Lactuca s.l. (Lactuceae, Asteraceae) inferred from AFLP fingerprints
    • Koopman, W. J. M., Zevenbergen, M. J. & Van den Berg, R. G. 2001. Species relationships in Lactuca s.l. (Lactuceae, Asteraceae) inferred from AFLP fingerprints. Amer. J. Bot. 88: 1881-1887.
    • (2001) Amer. J. Bot. , vol.88 , pp. 1881-1887
    • Koopman, W.J.M.1    Zevenbergen, M.J.2    Van Den Berg, R.G.3
  • 34
    • 0035255309 scopus 로고    scopus 로고
    • DNA profiling of disputed chilli samples (Capsicum annum) using ISSR-PCR and FISSR-PCR marker assays
    • Kumar, L. D., Kathirvel, M., Rao, G. V. & Nagaraju, J. 2001. DNA profiling of disputed chilli samples (Capsicum annum) using ISSR-PCR and FISSR-PCR marker assays. Forensic Sci. Int. 116: 63-68.
    • (2001) Forensic Sci. Int. , vol.116 , pp. 63-68
    • Kumar, L.D.1    Kathirvel, M.2    Rao, G.V.3    Nagaraju, J.4
  • 35
  • 36
    • 0035003679 scopus 로고    scopus 로고
    • An assessment of genetic relationships in cultivated tea clones and native wild tea in Taiwan using RAPD and ISSR maskers
    • Lai, J. A., Yang, W. C. & Hsiao, J. Y. 2001. An assessment of genetic relationships in cultivated tea clones and native wild tea in Taiwan using RAPD and ISSR maskers. Bot. Bul. Acad. Sin. 42: 93-100.
    • (2001) Bot. Bul. Acad. Sin. , vol.42 , pp. 93-100
    • Lai, J.A.1    Yang, W.C.2    Hsiao, J.Y.3
  • 37
    • 14644391571 scopus 로고    scopus 로고
    • Hybrid origin of "Bauhinia blakeana" (Leguminosae: Caesalpinioideae), inferred using morphological reproductive, and molecular data
    • Lau, C. P. Y., Ramsden, L. & Saunders, R. M. K. 2005. Hybrid origin of "Bauhinia blakeana" (Leguminosae: Caesalpinioideae), inferred using morphological reproductive, and molecular data. Amer. J. Bot. 92: 525-533.
    • (2005) Amer. J. Bot. , vol.92 , pp. 525-533
    • Lau, C.P.Y.1    Ramsden, L.2    Saunders, R.M.K.3
  • 38
    • 0000492373 scopus 로고
    • The uniquely evolved character concept and its cladistic application
    • Le Quesne, W. J. 1974. The uniquely evolved character concept and its cladistic application. Syst. Zool. 23: 513-517.
    • (1974) Syst. Zool. , vol.23 , pp. 513-517
    • Le Quesne, W.J.1
  • 39
    • 33749559066 scopus 로고    scopus 로고
    • ISSR variation in Iowa populations of the glacial relict Chrysosplenium iowense (Saxifragaceae)
    • Botanical Society of America (eds.), Botany 2005, Austin
    • Levsen, N. & Mort, M. E. 2005. ISSR variation in Iowa populations of the glacial relict Chrysosplenium iowense (Saxifragaceae). P. 380 in: Botanical Society of America (eds.), Botany 2005, Austin, Texas, U. S. A., Abstract Book. Botany 2005, Austin.
    • (2005) Botany 2005, Austin, Texas, U. S. A., Abstract Book , pp. 380
    • Levsen, N.1    Mort, M.E.2
  • 40
    • 16444379441 scopus 로고    scopus 로고
    • Population genetic structure of an ectomycorrhizal fungus Amanita manginiana in a subtropical forest over two years
    • Liang, Y., Guo, L. D. & Ma, K. P. 2005. Population genetic structure of an ectomycorrhizal fungus Amanita manginiana in a subtropical forest over two years. Mycorrhiza 15: 137-142.
    • (2005) Mycorrhiza , vol.15 , pp. 137-142
    • Liang, Y.1    Guo, L.D.2    Ma, K.P.3
  • 41
    • 0043138933 scopus 로고    scopus 로고
    • Intersimple sequence repeat (ISSR) polymorphisms as a genetic marker system in cotton
    • Liu, B. & Wendel, J. F. 2001. Intersimple sequence repeat (ISSR) polymorphisms as a genetic marker system in cotton. Molec. Ecol. Notes 1: 205-208.
    • (2001) Molec. Ecol. Notes , vol.1 , pp. 205-208
    • Liu, B.1    Wendel, J.F.2
  • 42
    • 0028406882 scopus 로고
    • Analysis of population genetic structure with RAPD markers
    • Lynch, M. & Milligan, B. G. 1994. Analysis of population genetic structure with RAPD markers. Molec. Ecol. 3: 91-99.
    • (1994) Molec. Ecol. , vol.3 , pp. 91-99
    • Lynch, M.1    Milligan, B.G.2
  • 43
    • 1942424151 scopus 로고    scopus 로고
    • Sequence assessment of comigrating AFLP (TM) bands in Echinacea - Implications for comparative biological studies
    • Mechanda, S. M., Baum, B. R., Johnson, D. A. & Arnason, J. T. 2004. Sequence assessment of comigrating AFLP (TM) bands in Echinacea - implications for comparative biological studies. Genome 47: 15-25.
    • (2004) Genome , vol.47 , pp. 15-25
    • Mechanda, S.M.1    Baum, B.R.2    Johnson, D.A.3    Arnason, J.T.4
  • 44
    • 0036272828 scopus 로고    scopus 로고
    • Phylogenetics and evolution of the Macaronesian clade of Crassulaceae inferred from nuclear and chloroplast sequence data
    • Mort, M. E., Soltis, D. E., Soltis, P. S., Francisco-Ortega, J. & Santos-Guerra, A. 2002. Phylogenetics and evolution of the Macaronesian clade of Crassulaceae inferred from nuclear and chloroplast sequence data. Syst. Bot. 27: 271-288.
    • (2002) Syst. Bot. , vol.27 , pp. 271-288
    • Mort, M.E.1    Soltis, D.E.2    Soltis, P.S.3    Francisco-Ortega, J.4    Santos-Guerra, A.5
  • 45
    • 11144271351 scopus 로고    scopus 로고
    • Molecular phylogeny of the nasuta subgroup of Drosophila based on 12S rRNA, 16S rRNA and CoI mitochondrial genes, RAPD and ISSR polymorphisms
    • Nagaraja, Nagaraju, J. & Ranganath, H. A. 2004. Molecular phylogeny of the nasuta subgroup of Drosophila based on 12S rRNA, 16S rRNA and CoI mitochondrial genes, RAPD and ISSR polymorphisms. Genes Genet. Syst. 79: 293-299.
    • (2004) Genes Genet. Syst. , vol.79 , pp. 293-299
    • Nagaraja1    Nagaraju, J.2    Ranganath, H.A.3
  • 46
    • 0037197888 scopus 로고    scopus 로고
    • Genetic analysis of traditional and evolved Basmati and non-Basmati rice varieties by using fluorescence-based ISSR-PCR and SSR markers
    • Nagaraju, J., Kathirvel, M., Kumar, R. R., Siddiq, E. A. & Hasnain, S. E. 2002a. Genetic analysis of traditional and evolved Basmati and non-Basmati rice varieties by using fluorescence-based ISSR-PCR and SSR markers. Proc. Natl. Acad. Sci. U. S. A. 99: 5836-5841.
    • (2002) Proc. Natl. Acad. Sci. U. S. A. , vol.99 , pp. 5836-5841
    • Nagaraju, J.1    Kathirvel, M.2    Kumar, R.R.3    Siddiq, E.A.4    Hasnain, S.E.5
  • 47
    • 0036130357 scopus 로고    scopus 로고
    • FISSR-PCR: A simple and sensitive assay for highthroughput genotyping and genetic mapping
    • Nagaraju, J., Kathirvel, M., Subbaiah, E. V., Muthulakshmi, M. & Kumar, L. D. 2002b. FISSR-PCR: a simple and sensitive assay for highthroughput genotyping and genetic mapping. Molec. Cell. Probe 16: 67-72.
    • (2002) Molec. Cell. Probe , vol.16 , pp. 67-72
    • Nagaraju, J.1    Kathirvel, M.2    Subbaiah, E.V.3    Muthulakshmi, M.4    Kumar, L.D.5
  • 48
    • 0000655270 scopus 로고
    • Genetic distance between populations
    • Nei, M. 1972. Genetic distance between populations. Amer. Natl. 106: 283-292.
    • (1972) Amer. Natl. , vol.106 , pp. 283-292
    • Nei, M.1
  • 49
    • 0005814023 scopus 로고
    • Mathematical model for studying genetic variation in terms of restriction endonucleases
    • Nei, M. & Li, W.-H. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. U.S.A. 76: 5269-5273.
    • (1979) Proc. Natl. Acad. Sci. U.S.A. , vol.76 , pp. 5269-5273
    • Nei, M.1    Li, W.-H.2
  • 50
    • 0003581979 scopus 로고    scopus 로고
    • WinBoot: A Program for Performing Bootstrap Analysis of Binary Data to Determine the Confidence Limits of UPGMA-Based Dendrograms
    • International Rice Research Institute, Manilla
    • Nelson, R. J. & Yap, V. I. 1996. WinBoot: a Program for Performing Bootstrap Analysis of Binary Data to Determine the Confidence Limits of UPGMA-Based Dendrograms. IRRI Discussion paper series No. 14. International Rice Research Institute, Manilla.
    • (1996) IRRI Discussion Paper Series No. 14
    • Nelson, R.J.1    Yap, V.I.2
  • 51
    • 0034760463 scopus 로고    scopus 로고
    • Comparison of RAPD, STS, ISSR and AFLP molecular methods used for assessment of genetic diversity in hop (Humulus lupulus L.)
    • Patzak, J. 2001. Comparison of RAPD, STS, ISSR and AFLP molecular methods used for assessment of genetic diversity in hop (Humulus lupulus L.). Euphytica 121: 9-18.
    • (2001) Euphytica , vol.121 , pp. 9-18
    • Patzak, J.1
  • 52
    • 0033289156 scopus 로고    scopus 로고
    • FreeTree-freeware program for construction of phylogenetic trees on the basis of distance data and bootstrap jackknife analysis of the tree robustness. Application in the RAPD analysis of genus Frenkelia
    • Pavlicek, A., Hrda, S. & Flegr, J. 1999. FreeTree-freeware program for construction of phylogenetic trees on the basis of distance data and bootstrap jackknife analysis of the tree robustness. Application in the RAPD analysis of genus Frenkelia. Folia Biol. 45: 97-99.
    • (1999) Folia Biol. , vol.45 , pp. 97-99
    • Pavlicek, A.1    Hrda, S.2    Flegr, J.3
  • 53
    • 0036305994 scopus 로고    scopus 로고
    • Tackling speciose genera: Species composition and phylogenetic position of Senecio sect. Jacobaea (Asteraceae) based on plastid and nrDNA sequences
    • Pelser, P. B., Gravendeel, B. & van der Meijden, R. 2002. Tackling speciose genera: species composition and phylogenetic position of Senecio sect. Jacobaea (Asteraceae) based on plastid and nrDNA sequences. Amer. J. Bot. 89: 929-939.
    • (2002) Amer. J. Bot. , vol.89 , pp. 929-939
    • Pelser, P.B.1    Gravendeel, B.2    Van Der Meijden, R.3
  • 54
    • 1642385473 scopus 로고    scopus 로고
    • Application of RAPD and ISSR markers to analyse molecular relationships in Grevillea (Proteaceae)
    • Pharmawati, M., Yan, G. & McFarlane, I. J. 2004. Application of RAPD and ISSR markers to analyse molecular relationships in Grevillea (Proteaceae). Aust. Syst. Bot. 17: 49-61.
    • (2004) Aust. Syst. Bot. , vol.17 , pp. 49-61
    • Pharmawati, M.1    Yan, G.2    McFarlane, I.J.3
  • 55
    • 21244462768 scopus 로고    scopus 로고
    • Molecular variation and fingerprinting of Leucadendron cultivars (Proteaceae) by ISSR markers
    • Pharmawati, M., Yan, G. J. & Finnegan, P. M. 2005. Molecular variation and fingerprinting of Leucadendron cultivars (Proteaceae) by ISSR markers. Ann. Bot. 95: 1163-1170.
    • (2005) Ann. Bot. , vol.95 , pp. 1163-1170
    • Pharmawati, M.1    Yan, G.J.2    Finnegan, P.M.3
  • 56
    • 0030039312 scopus 로고    scopus 로고
    • Homology among RAPD fragments in interspecific comparisons
    • Rieseberg, L. H. 1996. Homology among RAPD fragments in interspecific comparisons. Molec. Ecol. 5: 99-105.
    • (1996) Molec. Ecol. , vol.5 , pp. 99-105
    • Rieseberg, L.H.1
  • 58
    • 16444366318 scopus 로고    scopus 로고
    • Assessment of genetic diversity within and among Basmati and non-Basmati rice varieties using AFLP, ISSR and SSR markers
    • Saini, N., Jain, N., Jain, S. & Jain, R. K. 2004. Assessment of genetic diversity within and among Basmati and non-Basmati rice varieties using AFLP, ISSR and SSR markers. Euphytica 140: 133-146.
    • (2004) Euphytica , vol.140 , pp. 133-146
    • Saini, N.1    Jain, N.2    Jain, S.3    Jain, R.K.4
  • 59
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molec. Biol. Evol. 4: 406-425.
    • (1987) Molec. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 60
    • 0028259172 scopus 로고
    • Radiation of the endemic genus Dendroseris (Asteraceae) on the Juan Fernández Islands: Evidence from sequences of the ITS regions of nuclear ribosomal DNA
    • Sang, T., Crawford, D. J., Kim, S. C. & Stuessy, T. F. 1994. Radiation of the endemic genus Dendroseris (Asteraceae) on the Juan Fernández Islands: evidence from sequences of the ITS regions of nuclear ribosomal DNA. Amer. J. Bot. 81: 1494-1501.
    • (1994) Amer. J. Bot. , vol.81 , pp. 1494-1501
    • Sang, T.1    Crawford, D.J.2    Kim, S.C.3    Stuessy, T.F.4
  • 65
    • 0002969802 scopus 로고
    • A method of establishing groups of equal amplitude in plant sociology based on similarity of species content and its application to analyses of the vegetation on Danish commons
    • Sørensen, T. 1948. A method of establishing groups of equal amplitude in plant sociology based on similarity of species content and its application to analyses of the vegetation on Danish commons. Biol. Skr. 5: 1-34.
    • (1948) Biol. Skr. , vol.5 , pp. 1-34
    • Sørensen, T.1
  • 66
    • 0028050863 scopus 로고
    • Comparison of RFLP and RAPD markers to estimating genetic-relationships within and among cruciferous species
    • Thormann, C. E., Ferreira, M. E., Camargo, L. E. A., Tivang, J. G. & Osborn, T. C. 1994. Comparison of RFLP and RAPD markers to estimating genetic-relationships within and among cruciferous species. Theor. Appl. Genet. 88: 973-980.
    • (1994) Theor. Appl. Genet. , vol.88 , pp. 973-980
    • Thormann, C.E.1    Ferreira, M.E.2    Camargo, L.E.A.3    Tivang, J.G.4    Osborn, T.C.5
  • 67
    • 0038785564 scopus 로고    scopus 로고
    • Phylogenetic relationships in Asphodelaceae (subfamily Alooideae) inferred from chloroplast DNA sequences (rbcL, matK) and from genomic fingerprinting (ISSR)
    • Treutlein, J., Smith, G. F., Van Wyk, B. E. & Wink, M. 2003. Phylogenetic relationships in Asphodelaceae (subfamily Alooideae) inferred from chloroplast DNA sequences (rbcL, matK) and from genomic fingerprinting (ISSR). Taxon 52: 193-207.
    • (2003) Taxon , vol.52 , pp. 193-207
    • Treutlein, J.1    Smith, G.F.2    Van Wyk, B.E.3    Wink, M.4
  • 68
    • 0028509254 scopus 로고
    • TREECON for windows: A software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment
    • Van de Peer, Y. & De Wachter, R. 1994. TREECON for windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Comput. Applic. Biosci. 10: 569-570.
    • (1994) Comput. Applic. Biosci. , vol.10 , pp. 569-570
    • Van De Peer, Y.1    De Wachter, R.2
  • 69
    • 0035022332 scopus 로고    scopus 로고
    • Molecular fingerprinting evidence (ISSR, inter-simple sequence repeats) for a wild status of Olea europaea L. (Oleaceae) in the Eurosiberian North of the Iberian Peninsula
    • Vargas, P. & Kadereit, J. W. 2001. Molecular fingerprinting evidence (ISSR, inter-simple sequence repeats) for a wild status of Olea europaea L. (Oleaceae) in the Eurosiberian North of the Iberian Peninsula. Flora 196: 142-152.
    • (2001) Flora , vol.196 , pp. 142-152
    • Vargas, P.1    Kadereit, J.W.2
  • 70
    • 1042302377 scopus 로고    scopus 로고
    • Genetic relationships of Japanese and Indian mulberry (Morus spp.) genotypes revealed by DNA fingerprinting
    • Vijayan, K. 2003. Genetic relationships of Japanese and Indian mulberry (Morus spp.) genotypes revealed by DNA fingerprinting. Plant Syst. Evol. 243: 221-232.
    • (2003) Plant Syst. Evol. , vol.243 , pp. 221-232
    • Vijayan, K.1
  • 71
    • 0038034508 scopus 로고    scopus 로고
    • ISSR profiling of Indian cultivars of mulberry (Morus spp.) and its relevance to breeding programs
    • Vijayan, K. & Chatterjee, S. N. 2003. ISSR profiling of Indian cultivars of mulberry (Morus spp.) and its relevance to breeding programs. Euphytica 131: 53-63.
    • (2003) Euphytica , vol.131 , pp. 53-63
    • Vijayan, K.1    Chatterjee, S.N.2
  • 72
    • 17444412713 scopus 로고    scopus 로고
    • Molecular characterization of mulberry genetic resources indigenous to India
    • Vijayan, K., Nair, C. V. & Chatterjee, S. N. 2005. Molecular characterization of mulberry genetic resources indigenous to India. Genet. Resour. Crop Evol. 52: 77-86.
    • (2005) Genet. Resour. Crop Evol. , vol.52 , pp. 77-86
    • Vijayan, K.1    Nair, C.V.2    Chatterjee, S.N.3
  • 73
    • 0032969344 scopus 로고    scopus 로고
    • Intersimple sequence repeats (ISSR) molecular markers to distinguish gametophytes of Batrachospermum boryanum (Batrachospermales, Rhodophyta)
    • Vis, M. L. 1999. Intersimple sequence repeats (ISSR) molecular markers to distinguish gametophytes of Batrachospermum boryanum (Batrachospermales, Rhodophyta). Phycologia 38: 70-73.
    • (1999) Phycologia , vol.38 , pp. 70-73
    • Vis, M.L.1
  • 75
    • 2442697948 scopus 로고    scopus 로고
    • Inter-Simple Sequence Repeat (ISSR) markers support the species status of Weissia wimmeriana (Sendtn.) Bruch & Schimp. (Pottiaceae, Bryopsida)
    • Werner, O., Ros, R. M., Guerra, J. & Cano, M. J. 2004. Inter-Simple Sequence Repeat (ISSR) markers support the species status of Weissia wimmeriana (Sendtn.) Bruch & Schimp. (Pottiaceae, Bryopsida). Cryptog., Bryol. 25: 137-146.
    • (2004) Cryptog., Bryol. , vol.25 , pp. 137-146
    • Werner, O.1    Ros, R.M.2    Guerra, J.3    Cano, M.J.4
  • 76
    • 0035100803 scopus 로고    scopus 로고
    • Relationships within and among species of the holoparasitic genus Hyobanche (Orobanchaceae) inferred from ISSR banding patterns and nucleotide sequences
    • Wolfe, A. D. & Randle, C. P. 2001. Relationships within and among species of the holoparasitic genus Hyobanche (Orobanchaceae) inferred from ISSR banding patterns and nucleotide sequences. Syst. Bot. 26: 120-130.
    • (2001) Syst. Bot. , vol.26 , pp. 120-130
    • Wolfe, A.D.1    Randle, C.P.2
  • 77
    • 0032170574 scopus 로고    scopus 로고
    • Assessing hybridization in natural populations of Penstemon (Scrophulariaceae) using hypervariable intersimple sequence repeat (ISSR) bands
    • Wolfe, A. D., Xiang, Q.-Y. & Kephart, S. R. 1998. Assessing hybridization in natural populations of Penstemon (Scrophulariaceae) using hypervariable intersimple sequence repeat (ISSR) bands. Molec. Ecol. 7: 1107-1125.
    • (1998) Molec. Ecol. , vol.7 , pp. 1107-1125
    • Wolfe, A.D.1    Xiang, Q.-Y.2    Kephart, S.R.3
  • 79
    • 0028316648 scopus 로고
    • Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain-reaction amplification
    • Zietkiewicz, E., Rafalski, A. & Labuda, D. 1994. Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain-reaction amplification. Genomics 20: 176-183.
    • (1994) Genomics , vol.20 , pp. 176-183
    • Zietkiewicz, E.1    Rafalski, A.2    Labuda, D.3


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