메뉴 건너뛰기




Volumn 13, Issue 1, 2009, Pages 139-149

Bacterial community composition in thermophilic microbial mats from five hot springs in central Tibet

Author keywords

Chlorobi; Chloroflexi; Hot Springs; Proteobacteria; Synechococcus; Thermophiles

Indexed keywords

RNA 16S;

EID: 58149204132     PISSN: 14310651     EISSN: 14334909     Source Type: Journal    
DOI: 10.1007/s00792-008-0205-3     Document Type: Article
Times cited : (117)

References (40)
  • 1
    • 0037203218 scopus 로고    scopus 로고
    • New constraints on the India-Asia collision: The Lower Miocene Gangrinboche conglomerates, Yarlung Tsangpo suture zone, SE Tibet
    • Aitchison JC, Davis AM, Badengzhu, Luo H (2002) New constraints on the India-Asia collision: The Lower Miocene Gangrinboche conglomerates, Yarlung Tsangpo suture zone, SE Tibet. J Asian Earth Sci 21: 253-265
    • (2002) J Asian Earth Sci , vol.21 , pp. 253-265
    • Aitchison, J.C.1    Davis, A.M.2    Badengzhu3    Luo, H.4
  • 3
    • 0000651747 scopus 로고
    • Photoexcretion and consumption of glycolate in a hot spring cyanobacterial mat
    • MM Bateson DM Ward 1988 Photoexcretion and consumption of glycolate in a hot spring cyanobacterial mat Appl Environ Microbiol 54 1738 1743
    • (1988) Appl Environ Microbiol , vol.54 , pp. 1738-1743
    • Bateson, M.M.1    Ward, D.M.2
  • 4
    • 77957888370 scopus 로고
    • Stopping rules and estimation for recapture debugging with unequal failure rates
    • A Chao M-C Ma M Yang 1993 Stopping rules and estimation for recapture debugging with unequal failure rates Biometrika 80 193 201
    • (1993) Biometrika , vol.80 , pp. 193-201
    • Chao, A.1    Ma, M.-C.2    Yang, M.3
  • 6
    • 0036407157 scopus 로고    scopus 로고
    • What are bacterial species?
    • FM Cohan 2002 What are bacterial species? Ann Rev Microbiol 56 457 487
    • (2002) Ann Rev Microbiol , vol.56 , pp. 457-487
    • Cohan, F.M.1
  • 8
    • 0037479825 scopus 로고    scopus 로고
    • Microbial diversity of cryptoendolithic communities from the McMurdo dry valleys, Antarctica
    • JR de la Torre BR Goebel EI Friedmann NR Pace 2003 Microbial diversity of cryptoendolithic communities from the McMurdo dry valleys, Antarctica Appl Environ Microbiol 69 3858 3867
    • (2003) Appl Environ Microbiol , vol.69 , pp. 3858-3867
    • De La Torre, J.R.1    Goebel, B.R.2    Friedmann, E.I.3    Pace, N.R.4
  • 9
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin v3.0: An integrated software package for population genetics data analysis
    • LGL Excoffier S Schneider 2005 Arlequin v3.0: An integrated software package for population genetics data analysis Evol Bioinform online 1 47 50
    • (2005) Evol Bioinform Online , vol.1 , pp. 47-50
    • Excoffier, L.G.L.1    Schneider, S.2
  • 11
    • 0030613348 scopus 로고    scopus 로고
    • Seasonal distributions of dominant 16S rRNA-defined populations in a hot spring microbial mat examined by denaturing gradient gel electrophoresis
    • MJ Ferris DM Ward 1997 Seasonal distributions of dominant 16S rRNA-defined populations in a hot spring microbial mat examined by denaturing gradient gel electrophoresis Appl Environ Microbiol 63 1375 1381
    • (1997) Appl Environ Microbiol , vol.63 , pp. 1375-1381
    • Ferris, M.J.1    Ward, D.M.2
  • 12
    • 0030613231 scopus 로고    scopus 로고
    • Population structure and physiological changes within a hot spring microbial mat community following disturbance
    • MJ Ferris SC Nold NP Revsbech DM Ward 1997 Population structure and physiological changes within a hot spring microbial mat community following disturbance Appl Environ Microbiol 63 1367 1374
    • (1997) Appl Environ Microbiol , vol.63 , pp. 1367-1374
    • Ferris, M.J.1    Nold, S.C.2    Revsbech, N.P.3    Ward, D.M.4
  • 13
    • 0000803388 scopus 로고
    • The population frequencies of species and the estimation of population parameters
    • IL Good 1953 The population frequencies of species and the estimation of population parameters Biometrika 80 193 201
    • (1953) Biometrika , vol.80 , pp. 193-201
    • Good, I.L.1
  • 14
    • 0031912606 scopus 로고    scopus 로고
    • Novel division level bacterial diversity in a Yellowstone hot spring
    • P Hugenholtz C Pitulle KL Hershberger NR Pace 1998 Novel division level bacterial diversity in a Yellowstone hot spring J Bacteriol 180 366 376
    • (1998) J Bacteriol , vol.180 , pp. 366-376
    • Hugenholtz, P.1    Pitulle, C.2    Hershberger, K.L.3    Pace, N.R.4
  • 16
    • 23944519637 scopus 로고    scopus 로고
    • Community phylogenetic analysis of moderately thermophilic cyanobacterial mats from China, the Philippines and Thailand
    • HM Jing JC Aitchison DC Lacap Y Peeraornpisal U Sompong SB Pointing 2005 Community phylogenetic analysis of moderately thermophilic cyanobacterial mats from China, The Philippines and Thailand Extremophiles 9 325 332
    • (2005) Extremophiles , vol.9 , pp. 325-332
    • Jing, H.M.1    Aitchison, J.C.2    Lacap, D.C.3    Peeraornpisal, Y.4    Sompong, U.5    Pointing, S.B.6
  • 17
    • 33645998713 scopus 로고    scopus 로고
    • Community phylogenetic diversity of cyanobacterial mats associated with geothermal springs along a tropical intertidal gradient
    • H Jing DC Lacap CY Lau SB Pointing 2006 Community phylogenetic diversity of cyanobacterial mats associated with geothermal springs along a tropical intertidal gradient Extremophiles 10 159 163
    • (2006) Extremophiles , vol.10 , pp. 159-163
    • Jing, H.1    Lacap, D.C.2    Lau, C.Y.3    Pointing, S.B.4
  • 18
    • 28344454481 scopus 로고    scopus 로고
    • Community structure of free-floating filamentous cyanobacterial mats from the Wonder Lake geothermal springs in the Philippines
    • DC Lacap GJD Smith K Warren-Rhodes SB Pointing 2005 Community structure of free-floating filamentous cyanobacterial mats from the Wonder Lake geothermal springs in the Philippines Can J Microbiol 51 583 589
    • (2005) Can J Microbiol , vol.51 , pp. 583-589
    • Lacap, D.C.1    Smith, G.J.D.2    Warren-Rhodes, K.3    Pointing, S.B.4
  • 19
    • 35948948699 scopus 로고    scopus 로고
    • Thermophilic microbial mats in a tropical geothermal location display pronounced seasonal changes but appear resilient to stochastic disturbance
    • DC Lacap W Barraquio SB Pointing 2007 Thermophilic microbial mats in a tropical geothermal location display pronounced seasonal changes but appear resilient to stochastic disturbance Environ Microbiol 9 3065 3076
    • (2007) Environ Microbiol , vol.9 , pp. 3065-3076
    • Lacap, D.C.1    Barraquio, W.2    Pointing, S.B.3
  • 20
    • 33745027420 scopus 로고    scopus 로고
    • Highly diverse community structure in a remote central Tibetan geothermal spring does not display monotonic variation to thermal stress
    • CY Lau HM Jing JC Aitchison SB Pointing 2006 Highly diverse community structure in a remote central Tibetan geothermal spring does not display monotonic variation to thermal stress FEMS Microbiol Ecol 57 80 91
    • (2006) FEMS Microbiol Ecol , vol.57 , pp. 80-91
    • Lau, C.Y.1    Jing, H.M.2    Aitchison, J.C.3    Pointing, S.B.4
  • 21
    • 0000199284 scopus 로고
    • On the calculation of information-theoretical measures of diversity
    • H Lloyd JH Zar JR Karr 1968 On the calculation of information-theoretical measures of diversity Am Mid Nat 79 257 272
    • (1968) Am Mid Nat , vol.79 , pp. 257-272
    • Lloyd, H.1    Zar, J.H.2    Karr, J.R.3
  • 23
    • 0036324293 scopus 로고    scopus 로고
    • Phylogenetic approaches for describing and comparing the diversity of microbial communities
    • AP Martin 2002 Phylogenetic approaches for describing and comparing the diversity of microbial communities Appl Environ Microbiol 68 3673 3682
    • (2002) Appl Environ Microbiol , vol.68 , pp. 3673-3682
    • Martin, A.P.1
  • 24
    • 0029660267 scopus 로고    scopus 로고
    • Cultivation of chemoorganotrophic proteobacteria and Gram-positive bacteria from a hot spring microbial mat
    • SC Nold ED Kopczynski DM Ward 1996 Cultivation of chemoorganotrophic proteobacteria and Gram-positive bacteria from a hot spring microbial mat Appl Environ Microbiol 62 3917 3921
    • (1996) Appl Environ Microbiol , vol.62 , pp. 3917-3921
    • Nold, S.C.1    Kopczynski, E.D.2    Ward, D.M.3
  • 25
    • 0036247129 scopus 로고    scopus 로고
    • The long-term effects of UV exclusion on the microbial composition and photosynthetic competence of bacteria in hot-spring microbial mats
    • TB Norris TR McDermott RW Castenholz 2002 The long-term effects of UV exclusion on the microbial composition and photosynthetic competence of bacteria in hot-spring microbial mats FEMS Microbiol Ecol 39 193 209
    • (2002) FEMS Microbiol Ecol , vol.39 , pp. 193-209
    • Norris, T.B.1    McDermott, T.R.2    Castenholz, R.W.3
  • 27
    • 0009752612 scopus 로고
    • The measurement of diversity in different types of biological collections
    • EC Pielou 1966 The measurement of diversity in different types of biological collections J Theor Biol 13 131 144
    • (1966) J Theor Biol , vol.13 , pp. 131-144
    • Pielou, E.C.1
  • 28
    • 34249095755 scopus 로고    scopus 로고
    • The effects of temperature, pH and sulphide on community structure of hyperthermophilic streamers in hot springs of northern Thailand
    • D Purcell U Sompong CY Lau TG Barraclough Y Peerapornpisal SB Pointing 2007 The effects of temperature, pH and sulphide on community structure of hyperthermophilic streamers in hot springs of northern Thailand FEMS Microbiol Ecol 60 456 466
    • (2007) FEMS Microbiol Ecol , vol.60 , pp. 456-466
    • Purcell, D.1    Sompong, U.2    Lau, C.Y.3    Barraclough, T.G.4    Peerapornpisal, Y.5    Pointing, S.B.6
  • 30
    • 0029851589 scopus 로고    scopus 로고
    • Denaturing gradient gel electrophoresis used to monitor the enrichment culture of aerobic chemoorganotrophic bacteria from a hot spring cyanobacterial mat
    • CM Santegoeds SC Nold DM Ward 1996 Denaturing gradient gel electrophoresis used to monitor the enrichment culture of aerobic chemoorganotrophic bacteria from a hot spring cyanobacterial mat Appl Environ Microbiol 62 3922 3928
    • (1996) Appl Environ Microbiol , vol.62 , pp. 3922-3928
    • Santegoeds, C.M.1    Nold, S.C.2    Ward, D.M.3
  • 31
    • 0036890248 scopus 로고    scopus 로고
    • The production of biocatalysts and biomolecules from extremophiles
    • C Schiraldi M de Rosa 2002 The production of biocatalysts and biomolecules from extremophiles Trends Biotechnol 20 515 521
    • (2002) Trends Biotechnol , vol.20 , pp. 515-521
    • Schiraldi, C.1    De Rosa, M.2
  • 32
    • 0033943879 scopus 로고    scopus 로고
    • Influence of sulfide and temperature on species composition and community structure of hot spring microbial mats
    • S Skirnisdottir GO Hreggvidsson S Hjorleifsdottir VT Marteinsson 2000 Influence of sulfide and temperature on species composition and community structure of hot spring microbial mats Appl Environ Microbiol 66 2835 2841
    • (2000) Appl Environ Microbiol , vol.66 , pp. 2835-2841
    • Skirnisdottir, S.1    Hreggvidsson, G.O.2    Hjorleifsdottir, S.3    Marteinsson, V.T.4
  • 35
    • 0142016385 scopus 로고    scopus 로고
    • Conjugate strike-slip faulting along the Bangong-Nujiang suture zone accommodates coeval east-west extension and north-south shortening in the interior of the Tibetan Plateau
    • M Taylor A Yin FJ Ryerson P Kapp L Ding 2003 Conjugate strike-slip faulting along the Bangong-Nujiang suture zone accommodates coeval east-west extension and north-south shortening in the interior of the Tibetan Plateau Tectonics 22 1044
    • (2003) Tectonics , vol.22 , pp. 1044
    • Taylor, M.1    Yin, A.2    Ryerson, F.J.3    Kapp, P.4    Ding, L.5
  • 36
    • 0031574072 scopus 로고    scopus 로고
    • The Clustal X Windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • JD Thompson TJ Gibson F Plewniak F Jeanmougin DG Higgins 1997 The Clustal X Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucl Acids Res 24 4876 4882
    • (1997) Nucl Acids Res , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 38
    • 0031737291 scopus 로고    scopus 로고
    • A natural view of microbial biodiversity within hot spring cyanobacterial mat communities
    • DM Ward MJ Ferris SC Nold MM Bateson 1998 A natural view of microbial biodiversity within hot spring cyanobacterial mat communities Microbiol Mol Biol Rev 62 1353 1370
    • (1998) Microbiol Mol Biol Rev , vol.62 , pp. 1353-1370
    • Ward, D.M.1    Ferris, M.J.2    Nold, S.C.3    Bateson, M.M.4
  • 39
    • 0042242559 scopus 로고    scopus 로고
    • Geographical barriers isolate endemic population of hyperthermophilic archaea
    • RJ Whitaker DW Grogan JW Taylor 2003 Geographical barriers isolate endemic population of hyperthermophilic archaea Science 301 976 978
    • (2003) Science , vol.301 , pp. 976-978
    • Whitaker, R.J.1    Grogan, D.W.2    Taylor, J.W.3
  • 40
    • 0022180891 scopus 로고
    • Dynamics of cyanobacterial and ostracod interactions in an Oregon hot spring
    • CE Wickstrom RW Castenholz 1985 Dynamics of cyanobacterial and ostracod interactions in an Oregon hot spring Ecology 66 1024 1041
    • (1985) Ecology , vol.66 , pp. 1024-1041
    • Wickstrom, C.E.1    Castenholz, R.W.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.