Purification, crystallization and X-ray structures of the two manganese superoxide dismutases from Caenorhabditis elegans

Acta Crystallographica Section F: Structural Biology and Crystallization Communications

Volumn 64, Issue 12, 2008, Pages 1110-1114

  Trinh, Chi H ^a   Hunter, Thérèse ^b   Stewart, Emma E ^a   Phillips, Simon E V ^a   Hunter, Gary J ^b  

^a UNIVERSITY OF LEEDS   (United Kingdom)

^b UNIVERSITY OF MALTA   (Malta)

Author keywords

Caenorhabditis elegans; Manganese superoxide dismutases

Indexed keywords

CAENORHABDITIS ELEGANS PROTEIN; SUPEROXIDE DISMUTASE;

AMINO ACID SEQUENCE; ANIMAL; ARTICLE; CAENORHABDITIS ELEGANS; CHEMICAL STRUCTURE; CHEMISTRY; ENZYMOLOGY; ISOLATION AND PURIFICATION; METABOLISM; MOLECULAR GENETICS; PROTEIN CONFORMATION; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY; X RAY CRYSTALLOGRAPHY;

AMINO ACID SEQUENCE; ANIMALS; CAENORHABDITIS ELEGANS; CAENORHABDITIS ELEGANS PROTEINS; CRYSTALLOGRAPHY, X-RAY; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PROTEIN CONFORMATION; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID; SUPEROXIDE DISMUTASE;

CAENORHABDITIS ELEGANS;

EID: 57349121682     PISSN: 17443091     EISSN: 17443091     Source Type: Journal    
DOI: 10.1107/S1744309108037056     Document Type: Article

References (37)

1. Atzenhofer, W., Regelsberger, G., Jacob, U., Peschek, G., Furtmuller, P., Huber, R. & Obinger, C. (2002). J. Mol. Biol. 321, 479-489.
2. Bannister, J. V., Bannister, W. H. & Rotilio, G. (1987). Crit. Rev. Biochem. 22, 111-180.
3. Beauchamp, C. & Fridovich, I. (1971). Anal. Biochem. 44, 276-287.
4. Borgstahl, G. E., Parge, H. E., Hickey, M. J., Beyer, W. F. Jr, Hallewell, R. A. & Tainer, J. A. (1992). Cell, 71, 107-118.
5. Boucher, I. W., Kalliomaa, A. K., Levdikov, V. M., Blagova, E. V., Fogg, M. J., Brannigan, J. A., Wilson, K. S. & Wilkinson, A. J. (2005). Acta Cryst. F61, 621-624.
6. C. elegans Genome Consortium (1998). Science, 282, 2012-2018.
7. Collaborative Computational Project, Number 4 (1994). Acta Cryst. D50, 760-763.
8. Cruickshank, D. W. J. (1999). Acta Cryst. D55, 583-601.
9. DeLano, W. L. (2008). The PyMOL Molecular Graphics System. DeLano Scientific LLC, Palo Alto, California, USA. http://www.pymol.org.
10. Dennis, R. J., Micossi, E., McCarthy, J., Moe, E., Gordon, E. J., Kozielski-Stuhrmann, S., Leonard, G. A. & McSweeney, S. (2006). Acta Cryst. F62, 325-329.
11. Dong, M. Q., Venable, J. D., Au, N., Xu, T., Park, S. K., Cociorva, D., Johnson, J. R., Dillin, A. & Yates, J. R. III (2007). Science, 317, 660-663.
12. Edwards, R. A., Baker, H. M., Whittaker, M. M., Whittaker, J. W., Jameson, G. B. & Baker, E. N. (1998). J. Biol. Inorg. Chem. 3, 161-171.
13. Emsley, P. & Cowtan, K. (2004). Acta Cryst. D60, 2126-2132.
14. Engh, R. A. & Huber, R. (1991). Acta Cryst. A47, 392-400.
15. Fluckiger, S., Mittl, P. R., Scapozza, L., Fijten, H., Folkers, G., Grütter, M. G., Blaser, K. & Crameri, R. (2002). J. Immunol. 168, 1267-1272.
16. Fridovich, I. (1975). Annu. Rev. Biochem. 44, 147-159.
17. Gouet, P., Courcelle, E., Stuart, D. I. & Metoz, F. (1999). Bioinformatics, 15, 305-308.
18. Halliwell, B. & Gutteridge, J. M. C. (1985). Mol. Aspects Med. 8, 89-124.
19. Hearn, A. S., Stroupe, M. E., Cabelli, D. E., Ramilo, C. A., Luba, J. P., Tainer, J. A., Nick, H. S. & Silverman, D. N. (2003). Biochemistry, 42, 2781-2789.
20. Honda, Y. & Honda, S. (1999). FASEB J. 13, 1385-1393.
21. Honda, Y., Tanaka, M. & Honda, S. (2008). Exp. Gerontol. 43, 520-529.
22. Hunter, T., Bannister, W. H. & Hunter, G. J. (1997). J. Biol. Chem. 272, 28652-28659.
23. Jones, S. J., Riddle, D. L., Pouzyrev, A. T., Velculescu, V. E., Hillier, L., Eddy, S. R., Stricklin, S. L., Baillie, D. L., Waterston, R. & Marra, M. A. (2001). Genome Res. 11, 1346-1352.
24. Laemmli, U. (1970). Nature (London), 227, 680-685.
25. Laskowski, R. A., MacArthur, M. W., Moss, D. S. & Thornton, J. M. (1993). J. Appl. Cryst. 26, 283-291.
26. Lee, S. S., Kennedy, S., Tolonen, A. C. & Ruvkun, G. (2003). Science, 300, 644-647.
27. Leslie, A. G. W. (1999). Acta Cryst. D55, 1696-1702.
28. Ludwig, M. L., Metzger, A. L., Pattridge, K. A. & Stallings, W. C. (1991). J. Mol. Biol. 219, 335-358.
29. McCord, J. M. & Fridovich, I. (1969). J. Biol. Chem. 244, 6049-6055.
30. Murphy, C. T., McCarroll, S. A., Bargmann, C. I., Fraser, A., Kamath, R. S., Ahringer, J., Li, H. & Kenyon, C. (2003). Nature (London), 424, 277-283.
31. Murshudov, G. N., Vagin, A. A. & Dodson, E. J. (1997). Acta Cryst. D53, 240-255.
32. Parker, M. W. & Blake, C. F. (1988). J. Mol. Biol. 199, 649-661.
33. Read, R. J. (2001). Acta Cryst. D57, 1373-1382.
34. Smith, P. K., Krohn, R. I., Hermanson, G. T., Mallia, A. K., Gartner, F. H., Provenzano, M. D., Fujimoto, E. K., Goeke, N. M., Olson, B. J. & Klenk, D. C. (1985). Anal. Biochem. 150, 76-85.
35. Steinman, H. M. (1992). Mol. Gen. Genet. 232, 427-430.
36. Winn, M. D., Isupov, M. N. & Murshudov, G. N. (2001). Acta Cryst. D57, 122-133.
37. Ysebaert-Vanneste, M. & Vanneste, W. H. (1980). Anal. Biochem. 107, 86-95.