메뉴 건너뛰기




Volumn 84, Issue 11, 2008, Pages 916-929

Stochastic properties of radiation-induced DSB: DSB distributions in large scale chromatin loops, the HPRT gene and within the visible volumes of DNA repair foci

Author keywords

DNA loops; DNA modeling; DNA repair foci; DSB; Heavy ion; High LET radiation; HPRT gene

Indexed keywords

DNA; HEAVY ION; HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE;

EID: 57049168221     PISSN: 09553002     EISSN: 13623095     Source Type: Journal    
DOI: 10.1080/09553000802499212     Document Type: Article
Times cited : (30)

References (43)
  • 1
    • 33646769992 scopus 로고    scopus 로고
    • The loss of gamma-H2AX signal is a marker of DNA double strand breaks repair only at low levels of DNA damage
    • Bouquet F, Muller C, Salles B. 2006. The loss of gamma-H2AX signal is a marker of DNA double strand breaks repair only at low levels of DNA damage. Cell Cycle 5:1116-1122.
    • (2006) Cell Cycle , vol.5 , pp. 1116-1122
    • Bouquet, F.1    Muller, C.2    Salles, B.3
  • 2
    • 0014077855 scopus 로고
    • Theory of RBE for heavy ion bombardment of dry enzymes and viruses
    • Butts JJ, Katz R. 1967. Theory of RBE for heavy ion bombardment of dry enzymes and viruses. Radiation Research 30:855-871.
    • (1967) Radiation Research , vol.30 , pp. 855-871
    • Butts, J.J.1    Katz, R.2
  • 3
    • 2342471329 scopus 로고    scopus 로고
    • DNA fragmentation in V79 cells irradiated with light ions as measured by pulsed-field gel electrophoresis. II. Simulation with a generalized broken stick model
    • Campa A, Esposito G, Belli M, Simone G, Tabocchini MA. 2004. DNA fragmentation in V79 cells irradiated with light ions as measured by pulsed-field gel electrophoresis. II. Simulation with a generalized broken stick model. International Journal of Radiation Biology 80(3):229-238.
    • (2004) International Journal of Radiation Biology , vol.80 , Issue.3 , pp. 229-238
    • Campa, A.1    Esposito, G.2    Belli, M.3    Simone, G.4    Tabocchini, M.A.5
  • 4
    • 0024369699 scopus 로고
    • Calculation of initial yields of single- and double strand breaks in nuclei from electrons, protons, and alpha particles
    • Charlton DE, Nikjoo H, Humm JL. 1989. Calculation of initial yields of single- and double strand breaks in nuclei from electrons, protons, and alpha particles. International Journal of Radiation Biology 56:1-19.
    • (1989) International Journal of Radiation Biology , vol.56 , pp. 1-19
    • Charlton, D.E.1    Nikjoo, H.2    Humm, J.L.3
  • 5
    • 33646446295 scopus 로고    scopus 로고
    • Imaging features that discriminate between foci induced by high- and low-let radiation in human fibroblasts
    • Costes SV, Boissiere A, Ravani S, Romano R, Parvin B, Barcellos-Hoff MH. 2006. Imaging features that discriminate between foci induced by high- and low-let radiation in human fibroblasts. Radiation Research 165(5):505-515.
    • (2006) Radiation Research , vol.165 , Issue.5 , pp. 505-515
    • Costes, S.V.1    Boissiere, A.2    Ravani, S.3    Romano, R.4    Parvin, B.5    Barcellos-Hoff, M.H.6
  • 6
    • 34548414588 scopus 로고    scopus 로고
    • Costes S, Ponomarev A, Chen J, Cucinotta F, Barcellos-Hoff MH. 2007. Chromosome model reveals dynamic redistribution of DNA damage in nuclear sub-domains. PLoS Computational Biology Aug. 3;3(8):e155.
    • Costes S, Ponomarev A, Chen J, Cucinotta F, Barcellos-Hoff MH. 2007. Chromosome model reveals dynamic redistribution of DNA damage in nuclear sub-domains. PLoS Computational Biology Aug. 3;3(8):e155.
  • 7
    • 33645991783 scopus 로고    scopus 로고
    • Cancer risk from exposure to galactic cosmic rays: Implications for space exploration by human beings
    • Cucinotta FA, Durante M. 2006. Cancer risk from exposure to galactic cosmic rays: Implications for space exploration by human beings. Lancet Oncology 7:431-435.
    • (2006) Lancet Oncology , vol.7 , pp. 431-435
    • Cucinotta, F.A.1    Durante, M.2
  • 8
    • 57049160634 scopus 로고    scopus 로고
    • Cucinotta FA, Katz R, Wilson JW, Dubey RR. 1995. Radial dose distributions in the delta-ray theory of track structures. In: Gray TJ, Starace AF, editors. Proceedings of two-center effects in ion-atom collisions, AIP Conference Proceedings. Woodbury, NY. pp 245-265.
    • Cucinotta FA, Katz R, Wilson JW, Dubey RR. 1995. Radial dose distributions in the delta-ray theory of track structures. In: Gray TJ, Starace AF, editors. Proceedings of two-center effects in ion-atom collisions, AIP Conference Proceedings. Woodbury, NY. pp 245-265.
  • 9
    • 0031830904 scopus 로고    scopus 로고
    • Comment on the effects of delta-rays on the number of particle-track transversals per cell in laboratory and space exposures
    • Cucinotta FA, Nikjoo H, Goodhead DT. 1998. Comment on the effects of delta-rays on the number of particle-track transversals per cell in laboratory and space exposures. Radiation Research 150:115-119.
    • (1998) Radiation Research , vol.150 , pp. 115-119
    • Cucinotta, F.A.1    Nikjoo, H.2    Goodhead, D.T.3
  • 11
    • 0034074917 scopus 로고    scopus 로고
    • Model of the radial distribution of energy imparted in nanometer volumes from HZE particle
    • Cucinotta FA, Nikjoo H, Goodhead DT. 2000. Model of the radial distribution of energy imparted in nanometer volumes from HZE particle. Radiation Research 153:459-468.
    • (2000) Radiation Research , vol.153 , pp. 459-468
    • Cucinotta, F.A.1    Nikjoo, H.2    Goodhead, D.T.3
  • 12
    • 39749184636 scopus 로고    scopus 로고
    • Biochemical kinetics model of DSB repair and γH2AX foci by non-homologous end-joining
    • Cucinotta FA, Pluth JM, Anderson J, Harper JV, O'Neill P. 2008. Biochemical kinetics model of DSB repair and γH2AX foci by non-homologous end-joining. Radiation Research 169(2):214-222.
    • (2008) Radiation Research , vol.169 , Issue.2 , pp. 214-222
    • Cucinotta, F.A.1    Pluth, J.M.2    Anderson, J.3    Harper, J.V.4    O'Neill, P.5
  • 13
    • 0030014933 scopus 로고    scopus 로고
    • Effects of track structure and cell inactivation on the calculation of heavy ion mutation rates in mammalian cells
    • Cucinotta FA, Wilson JW, Shavers MR, Katz R. 1996. Effects of track structure and cell inactivation on the calculation of heavy ion mutation rates in mammalian cells. International Journal of Radiation Biology 69:593-600.
    • (1996) International Journal of Radiation Biology , vol.69 , pp. 593-600
    • Cucinotta, F.A.1    Wilson, J.W.2    Shavers, M.R.3    Katz, R.4
  • 14
    • 25444502873 scopus 로고    scopus 로고
    • Immunofluorescence detection of clustered gamma-H2AX foci induced by HZE-particle radiation
    • Desai N, Davis E, O'Neill P, Durante M, Cucinotta FA, Wu H. 2005. Immunofluorescence detection of clustered gamma-H2AX foci induced by HZE-particle radiation. Radiation Research 164(4 Pt. 2):518-222.
    • (2005) Radiation Research , vol.164 , Issue.4 PART. 2 , pp. 518-222
    • Desai, N.1    Davis, E.2    O'Neill, P.3    Durante, M.4    Cucinotta, F.A.5    Wu, H.6
  • 15
    • 0035003351 scopus 로고    scopus 로고
    • Simulation of exon deletion mutations induced by low-LET radiation at the HPRT locus
    • Friedland W, Li WB, Jacob P, Paretzke HG. 2001. Simulation of exon deletion mutations induced by low-LET radiation at the HPRT locus. Radiation Research 155(5):703-715.
    • (2001) Radiation Research , vol.155 , Issue.5 , pp. 703-715
    • Friedland, W.1    Li, W.B.2    Jacob, P.3    Paretzke, H.G.4
  • 16
    • 33644545366 scopus 로고    scopus 로고
    • Quantitative analysis reveals asynchronous and more than DSB-associated histone H2AX phosphorylation after exposure to ionizing radiation
    • Han J, Hendzel MJ, Allalunis-Turner J. 2006. Quantitative analysis reveals asynchronous and more than DSB-associated histone H2AX phosphorylation after exposure to ionizing radiation. Radiation Research 165:283-292.
    • (2006) Radiation Research , vol.165 , pp. 283-292
    • Han, J.1    Hendzel, M.J.2    Allalunis-Turner, J.3
  • 17
    • 0036842255 scopus 로고    scopus 로고
    • A model for interphase chromosomes and evaluation of radiation-induced aberrations
    • Holley WR, Mian IS, Park SJ, Rydberg B, Chatterjee A. 2002. A model for interphase chromosomes and evaluation of radiation-induced aberrations. Radiation Research 158:568-580.
    • (2002) Radiation Research , vol.158 , pp. 568-580
    • Holley, W.R.1    Mian, I.S.2    Park, S.J.3    Rydberg, B.4    Chatterjee, A.5
  • 18
    • 0038301384 scopus 로고    scopus 로고
    • Biological imaging of heavy charged-particle tracks
    • Jakob B, Scholz M, Taucher-Scholz G. 2003. Biological imaging of heavy charged-particle tracks. Radiation Research 159:676-684.
    • (2003) Radiation Research , vol.159 , pp. 676-684
    • Jakob, B.1    Scholz, M.2    Taucher-Scholz, G.3
  • 19
    • 0031900440 scopus 로고    scopus 로고
    • Higher-order chromatin structure-dependent repair of DNA double-strand breaks: Involvement of the V(D)J recombination double-strand break repair pathway
    • Johnston P, MacPhail S, Stamato T, Kirchgessner C, Olive P. 1998. Higher-order chromatin structure-dependent repair of DNA double-strand breaks: Involvement of the V(D)J recombination double-strand break repair pathway. Radiation Research 149:455-462.
    • (1998) Radiation Research , vol.149 , pp. 455-462
    • Johnston, P.1    MacPhail, S.2    Stamato, T.3    Kirchgessner, C.4    Olive, P.5
  • 20
    • 0036271813 scopus 로고    scopus 로고
    • Rejoining of radiation-induced DNA double-strand breaks: Pulsed-field gel electrophoresis analysis of fragment-size distributions after incubation for repair
    • Gauter B, Zlobinskaya O, Weber KJ. 2002. Rejoining of radiation-induced DNA double-strand breaks: Pulsed-field gel electrophoresis analysis of fragment-size distributions after incubation for repair. Radiation Research 157:721-733.
    • (2002) Radiation Research , vol.157 , pp. 721-733
    • Gauter, B.1    Zlobinskaya, O.2    Weber, K.J.3
  • 21
    • 37849028892 scopus 로고    scopus 로고
    • Extensive ssDNA end formation at DNA double-strand breaks in non-homologous endjoining deficient cells during the S phase
    • Karlsson KH, Stenerlow B. 2007. Extensive ssDNA end formation at DNA double-strand breaks in non-homologous endjoining deficient cells during the S phase. BMC Molecular Biology 8(1):97.
    • (2007) BMC Molecular Biology , vol.8 , Issue.1 , pp. 97
    • Karlsson, K.H.1    Stenerlow, B.2
  • 23
    • 0002910137 scopus 로고
    • Entanglement effects in polymer melts and networks
    • Binder K, editor, New York, Oxford: Oxford University Press. pp
    • Kremer K, Grest GS. 1995. Entanglement effects in polymer melts and networks. In: Binder K, editor. Monte Carlo and molecular dynamics simulations in polymer science. New York, Oxford: Oxford University Press. pp 194-271.
    • (1995) Monte Carlo and molecular dynamics simulations in polymer science , pp. 194-271
    • Kremer, K.1    Grest, G.S.2
  • 26
    • 0037981413 scopus 로고    scopus 로고
    • Cell cycle-dependent expression of phosphorylated histone H2AX: Reduced expression in unirradiated but not X-irradiated G1-phase cells
    • MacPhail SH, Banath JP, Yu Y, Chu E, Olive PL. 2003. Cell cycle-dependent expression of phosphorylated histone H2AX: reduced expression in unirradiated but not X-irradiated G1-phase cells. Radiation Research 159:759-767.
    • (2003) Radiation Research , vol.159 , pp. 759-767
    • MacPhail, S.H.1    Banath, J.P.2    Yu, Y.3    Chu, E.4    Olive, P.L.5
  • 27
    • 0030730114 scopus 로고    scopus 로고
    • Polymer models of meiotic and mitotic chromosomes
    • Marko JF, Siggia ED. 1997. Polymer models of meiotic and mitotic chromosomes. Molecular Biology of the Cell 8(11):2217-2231.
    • (1997) Molecular Biology of the Cell , vol.8 , Issue.11 , pp. 2217-2231
    • Marko, J.F.1    Siggia, E.D.2
  • 29
    • 48249142070 scopus 로고    scopus 로고
    • National Council on Radiation Protection and Measurements, Information needed to make radiation protection recommendations for space missions beyond Low-Earth Orbit, No. 153, Bethesda, MD
    • National Council on Radiation Protection and Measurements. 2006. Information needed to make radiation protection recommendations for space missions beyond Low-Earth Orbit. NCRP Report No. 153, Bethesda, MD.
    • (2006) NCRP Report
  • 30
    • 6344276557 scopus 로고    scopus 로고
    • A Monte Carlo model of DNA double-strand break clustering and rejoining kinetics for the analysis of pulsed-field gel electrophoresis data
    • Pinto M, Prise KM, Michael BD. 2004. A Monte Carlo model of DNA double-strand break clustering and rejoining kinetics for the analysis of pulsed-field gel electrophoresis data. Radiation Research 162(4):453-463.
    • (2004) Radiation Research , vol.162 , Issue.4 , pp. 453-463
    • Pinto, M.1    Prise, K.M.2    Michael, B.D.3
  • 31
    • 0033912212 scopus 로고    scopus 로고
    • A polymer random walk model for the size-distribution of large DNA fragments after high-LET radiation
    • Ponomarev AL, Brenner DJ, Hlatky LR, Sachs RK. 2000. A polymer random walk model for the size-distribution of large DNA fragments after high-LET radiation. Radiation and Environmental Biophysics 39(2):111-120.
    • (2000) Radiation and Environmental Biophysics , vol.39 , Issue.2 , pp. 111-120
    • Ponomarev, A.L.1    Brenner, D.J.2    Hlatky, L.R.3    Sachs, R.K.4
  • 32
    • 33646761276 scopus 로고    scopus 로고
    • Chromatin loops are responsible for higher counts of small DNA fragments induced by high-LET radiation, while chromosomal domains do not affect the fragment sizes
    • Ponomarev AL, Cucinotta FA. 2006a. Chromatin loops are responsible for higher counts of small DNA fragments induced by high-LET radiation, while chromosomal domains do not affect the fragment sizes. International Journal of Radiation Biology 82(4):293-305.
    • (2006) International Journal of Radiation Biology , vol.82 , Issue.4 , pp. 293-305
    • Ponomarev, A.L.1    Cucinotta, F.A.2
  • 34
    • 33751231713 scopus 로고    scopus 로고
    • Novel image processing interface to relate DSB spatial distribution from experiments with phosphorylation foci to the state-of-the-art models of DNA breakage
    • Ponomarev AL, Cucinotta FA. 2006c. Novel image processing interface to relate DSB spatial distribution from experiments with phosphorylation foci to the state-of-the-art models of DNA breakage. Radiation Measurements 41(9-10):1075-1079.
    • (2006) Radiation Measurements , vol.41 , Issue.9-10 , pp. 1075-1079
    • Ponomarev, A.L.1    Cucinotta, F.A.2
  • 35
  • 37
    • 0037884963 scopus 로고    scopus 로고
    • Rothkamm K, Locombining double acute accentbrich M. 2003. Evidence for a lack of DNA double-strand break repair in human cells exposed to very low X-ray doses. Proceedings of the National. Academy of Sciences USA 100:5057-5062.
    • Rothkamm K, Locombining double acute accentbrich M. 2003. Evidence for a lack of DNA double-strand break repair in human cells exposed to very low X-ray doses. Proceedings of the National. Academy of Sciences USA 100:5057-5062.
  • 38
    • 0034077890 scopus 로고    scopus 로고
    • Radiation-induced heat-labile sites that convert into DNA double-strand breaks
    • Rydberg B. 2000. Radiation-induced heat-labile sites that convert into DNA double-strand breaks. Radiation Research 153:805-812.
    • (2000) Radiation Research , vol.153 , pp. 805-812
    • Rydberg, B.1
  • 40
    • 0036789173 scopus 로고    scopus 로고
    • Quantitative detection of (125)IdU-induced DNA double-strand breaks with gamma-H2AX antibody
    • Sedelnikova OA, Rogakou EP, Panyutin IG, Bonner WM. 2002. Quantitative detection of (125)IdU-induced DNA double-strand breaks with gamma-H2AX antibody. Radiation Research 158(4):486-492.
    • (2002) Radiation Research , vol.158 , Issue.4 , pp. 486-492
    • Sedelnikova, O.A.1    Rogakou, E.P.2    Panyutin, I.G.3    Bonner, W.M.4
  • 41
    • 35148834590 scopus 로고    scopus 로고
    • Gamma-H2AX in bystander cells: Not just a radiation-triggered event, a cellular response to stress mediated by intercellular communication
    • Sokolov MV, Dickey JS, Bonner WM, Sedelnikova OA. 2007. Gamma-H2AX in bystander cells: not just a radiation-triggered event, a cellular response to stress mediated by intercellular communication. Cell Cycle 6(18):2210-2212.
    • (2007) Cell Cycle , vol.6 , Issue.18 , pp. 2210-2212
    • Sokolov, M.V.1    Dickey, J.S.2    Bonner, W.M.3    Sedelnikova, O.A.4
  • 43
    • 0037385724 scopus 로고    scopus 로고
    • Measurement of prompt DNA double-strand breaks in mammalian cells without including heat-labile sites: Results for cells deficient in nonhomologous end joining
    • Stenerlöw B, Karlsson KH, Cooper B, Rydberg B. 2003. Measurement of prompt DNA double-strand breaks in mammalian cells without including heat-labile sites: Results for cells deficient in nonhomologous end joining. Radiation Research 159:502-510.
    • (2003) Radiation Research , vol.159 , pp. 502-510
    • Stenerlöw, B.1    Karlsson, K.H.2    Cooper, B.3    Rydberg, B.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.