-
1
-
-
0025183708
-
Basic Local Alignment Search Tool
-
Altschul, S.F., Gish, W., Miller, W.. Myers, E.W., Lipman, D.J.: Basic Local Alignment Search Tool. J. Mol. Biol. 215(3), 403-410 (1990)
-
(1990)
J. Mol. Biol
, vol.215
, Issue.3
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A New Generation of Protein Database Search Programs
-
Altschul, S.F., et al.: Gapped BLAST and PSI-BLAST: A New Generation of Protein Database Search Programs. Nucleic Acid Research 25(7), 3389-3402 (1997)
-
(1997)
Nucleic Acid Research
, vol.25
, Issue.7
, pp. 3389-3402
-
-
Altschul, S.F.1
-
3
-
-
33745322315
-
A Deterministic Finite Automaton for Faster Protein Hit Detection in BLAST
-
Cameron. M., Williams. H.E., Cannane, A.: A Deterministic Finite Automaton for Faster Protein Hit Detection in BLAST. Journal of Computational Biology 13(4), 965-978 (2006)
-
(2006)
Journal of Computational Biology
, vol.13
, Issue.4
, pp. 965-978
-
-
Cameron, M.1
Williams, H.E.2
Cannane, A.3
-
4
-
-
14744270579
-
Improved Gapped Alignment in BLAST
-
Cameron. M., Williams, H.E., Cannane, A.: Improved Gapped Alignment in BLAST. IEEE Trans. Computational Biology and Bioinformatics 1(3), 116-129 (2004)
-
(2004)
IEEE Trans. Computational Biology and Bioinformatics
, vol.1
, Issue.3
, pp. 116-129
-
-
Cameron, M.1
Williams, H.E.2
Cannane, A.3
-
5
-
-
84874601312
-
-
Jacob, A., Lancaster, J., Harris, B., Buhler, J.. Chamberlain. R.: Mercury BLASTP: Accelerating Protein Sequence Alignment. ACM Transactions on Reconfigurable Technology and Systems(to appear, 2008)
-
Jacob, A., Lancaster, J., Harris, B., Buhler, J.. Chamberlain. R.: Mercury BLASTP: Accelerating Protein Sequence Alignment. ACM Transactions on Reconfigurable Technology and Systems(to appear, 2008)
-
-
-
-
6
-
-
25844503119
-
Introduction the Cell multiprocessor
-
Kahle, J.A., et al.: Introduction the Cell multiprocessor. IBM Journal of Research and Development 49(4/5). 598-604 (2005)
-
(2005)
IBM Journal of Research and Development
, vol.49
, Issue.4-5
, pp. 598-604
-
-
Kahle, J.A.1
-
7
-
-
0036226603
-
BLAT - The BLAST-like Alignment Tool
-
Kent, W.J.: BLAT - The BLAST-like Alignment Tool. Genome Research 12(4), 656-664 (2002)
-
(2002)
Genome Research
, vol.12
, Issue.4
, pp. 656-664
-
-
Kent, W.J.1
-
8
-
-
33746923043
-
Cell multiprocessor communication network: Built for speed
-
Kistler, M., Perrone, F., Petrini, F.: Cell multiprocessor communication network: built for speed. IEEE Micro. 26(3), 10-23 (2006)
-
(2006)
IEEE Micro
, vol.26
, Issue.3
, pp. 10-23
-
-
Kistler, M.1
Perrone, F.2
Petrini, F.3
-
9
-
-
4544349273
-
Pattemhunter II: Highly Sensitive and Fast Homology Search
-
Li. M., Ma, B., Kisman, D., Tromp, J.: Pattemhunter II: Highly Sensitive and Fast Homology Search. J. Bioinformatics and Computational Biology 2(3). 417-439 (2004)
-
(2004)
J. Bioinformatics and Computational Biology
, vol.2
, Issue.3
, pp. 417-439
-
-
Li, M.1
Ma, B.2
Kisman, D.3
Tromp, J.4
-
10
-
-
33746091677
-
ScalaBLAST: A scalable implementation of BLAST for high-performance data-intensive bioinformatics analysis
-
Oehmen, C., Nieplocha, J.: ScalaBLAST: A scalable implementation of BLAST for high-performance data-intensive bioinformatics analysis. IEEE Transactions on Parallel and Distributed Systems 17(8). 740-749 (2006)
-
(2006)
IEEE Transactions on Parallel and Distributed Systems
, vol.17
, Issue.8
, pp. 740-749
-
-
Oehmen, C.1
Nieplocha, J.2
-
11
-
-
27344435504
-
The design and implementation of a first-generation Cell processor
-
San Francisco, CA, pp
-
Pham, D.. et al.: The design and implementation of a first-generation Cell processor. In: Proceedings IEEE ISSCC 2005, San Francisco, CA, pp. 184-185 (2005)
-
(2005)
Proceedings IEEE ISSCC
, pp. 184-185
-
-
Pham, D.1
-
12
-
-
49949114904
-
Exploring the viability of the Cell Broadband Engine for bioinformatics applications
-
Long Beach, CA
-
Sachdeva, V., Kistler, M., Speight, E., Tzeng, T.H.K.: Exploring the viability of the Cell Broadband Engine for bioinformatics applications. In: 6th IEEE International Workshop on High Performance Computational Biology (HiCOMB 2007). Long Beach, CA (2007)
-
(2007)
6th IEEE International Workshop on High Performance Computational Biology (HiCOMB
-
-
Sachdeva, V.1
Kistler, M.2
Speight, E.3
Tzeng, T.H.K.4
-
13
-
-
0019887799
-
Identification of Common Molecular Subsequences
-
Smith, T.F., Waterman, M.S.: Identification of Common Molecular Subsequences. J. Mol. Biol. 147, 195-197 (1981)
-
(1981)
J. Mol. Biol
, vol.147
, pp. 195-197
-
-
Smith, T.F.1
Waterman, M.S.2
-
14
-
-
57049120467
-
-
Wirawan, A., Kwoh, C.K., Schmidt. B.: Parallel DNA Sequence Alignment on the Cell Broadband Engine. In: Wyrzykowski. R., Dongarra, J., Karczewski, K., Waśniewski, J. (eds.) PPAM 2007. LNCS. 4967. Springer, Heidelberg (to appear, 2008)
-
Wirawan, A., Kwoh, C.K., Schmidt. B.: Parallel DNA Sequence Alignment on the Cell Broadband Engine. In: Wyrzykowski. R., Dongarra, J., Karczewski, K., Waśniewski, J. (eds.) PPAM 2007. LNCS. vol. 4967. Springer, Heidelberg (to appear, 2008)
-
-
-
|