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Volumn 46, Issue 3, 2008, Pages 405-423

Long-term maintenance of stable copy number in the eukaryotic SMC family: origin of a vertebrate meiotic SMC1 and fate of recent segmental duplicates

Author keywords

Cohesin; Condensin; Meiosis; Segmental duplication; SMC

Indexed keywords

EUKARYOTA; INVERTEBRATA; PROKARYOTA; VERTEBRATA;

EID: 56849133753     PISSN: 16744918     EISSN: 17596831     Source Type: Journal    
DOI: 10.3724/SP.J.1002.2008.08031     Document Type: Article
Times cited : (7)

References (46)
  • 2
    • 0036673244 scopus 로고    scopus 로고
    • Conserved disruptions in the predicted coiled-coil domains of eukaryotic SMC complexes: Implications for structure and function
    • Beasley M, Xu H, Warren W, McKay M. 2002. Conserved disruptions in the predicted coiled-coil domains of eukaryotic SMC complexes: implications for structure and function. Genome Research 12: 1201-1209.
    • (2002) Genome Research , vol.12 , pp. 1201-1209
    • Beasley, M.1    Xu, H.2    Warren, W.3    McKay, M.4
  • 3
    • 1542376771 scopus 로고    scopus 로고
    • The evolution of SMC proteins: Phylogenetic analysis and structural implications
    • Cobbe N, Heck MM. 2004. The evolution of SMC proteins: phylogenetic analysis and structural implications. Molecular Biology and Evolution 21: 332-347.
    • (2004) Molecular Biology and Evolution , vol.21 , pp. 332-347
    • Cobbe, N.1    Heck, M.M.2
  • 4
    • 84940577866 scopus 로고    scopus 로고
    • Deardorff MA, Kaur M, Yaeger D, Rampuria A, Korolev S, Pie J, Gil-Rodriquez C, Arnedo M, Loeys B, Kline AD, Wilson M, Lillquist K, Siu V, Ramos FJ, Musio A
    • Deardorff MA, Kaur M, Yaeger D, Rampuria A, Korolev S, Pie J, Gil-Rodriquez C, Arnedo M, Loeys B, Kline AD, Wilson M, Lillquist K, Siu V, Ramos FJ, Musio A,
  • 5
    • 33847196427 scopus 로고    scopus 로고
    • Mutations in cohesin complex members SMC3 and SMCIA cause a mild variant of Cornelia de Lange syndrome with predominant mental retardation
    • Jackson LS, Dorsett D, Krantz ID. 2007. Mutations in cohesin complex members SMC3 and SMCIA cause a mild variant of Cornelia de Lange syndrome with predominant mental retardation. The American Journal of Human Genetics 80: 485-494.
    • (2007) The American Journal of Human Genetics , vol.80 , pp. 485-494
    • Jackson, L.S.1    Dorsett, D.2    Krantz, I.D.3
  • 6
    • 0035854052 scopus 로고    scopus 로고
    • Cloning and characterization of two Arabidopsis genes that belong to the RAD21/REC8 family of chromosome cohesin proteins
    • Dong F, Cai X, Makaroff CA. 2001. Cloning and characterization of two Arabidopsis genes that belong to the RAD21/REC8 family of chromosome cohesin proteins. Gene 271: 99-108.
    • (2001) Gene , vol.271 , pp. 99-108
    • Dong, F.1    Cai, X.2    Makaroff, C.A.3
  • 7
    • 13244255415 scopus 로고    scopus 로고
    • MUSCLE: A multiple sequence alignment method with reduced time and space complexity [online]
    • doi: 10.1186/1471-2105-5-113. Available from, accessed 5 March 2008
    • Edger RC. 2004. MUSCLE: a multiple sequence alignment method with reduced time and space complexity [online]. BMC Bioinformatics 5: 113. doi: 10.1186/1471-2105-5-113. Available from http://www.biomedcentral.com [accessed 5 March 2008].
    • (2004) BMC Bioinformatics , vol.5 , pp. 113
    • Edger, R.C.1
  • 8
    • 0034054123 scopus 로고    scopus 로고
    • Association of mammalian SMC1 and SMC3 proteins with meiotic chromosomes and synaptonemal complexes
    • Eijpe M, Heyting C, Gross B, Jessberger R. 2000. Association of mammalian SMC1 and SMC3 proteins with meiotic chromosomes and synaptonemal complexes. Journal of Cell Science 113: 673-683.
    • (2000) Journal of Cell Science , vol.113 , pp. 673-683
    • Eijpe, M.1    Heyting, C.2    Gross, B.3    Jessberger, R.4
  • 9
    • 27544443246 scopus 로고    scopus 로고
    • Cohesin and the maternal age effect
    • Gilliland WD, Hawley RS. 2005. Cohesin and the maternal age effect. Cell 123: 371-373.
    • (2005) Cell , vol.123 , pp. 371-373
    • Gilliland, W.D.1    Hawley, R.S.2
  • 10
    • 0242578620 scopus 로고    scopus 로고
    • PhyML-A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S, Gascuel O. 2003. PhyML-A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Systematic Biology 52: 696-704.
    • (2003) Systematic Biology , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 11
    • 0037084037 scopus 로고    scopus 로고
    • The ABCs of SMC proteins: Two-armed ATPases for chromosome condensation, cohesion, and repair
    • Hirano T. 2002. The ABCs of SMC proteins: two-armed ATPases for chromosome condensation, cohesion, and repair. Genes & Development 16: 399-414.
    • (2002) Genes & Development , vol.16 , pp. 399-414
    • Hirano, T.1
  • 12
    • 28444461450 scopus 로고    scopus 로고
    • SMC1 beta-deficient female mice provide evidence that cohesins are a missing link in age-related nondisjunction
    • Hodges CA, Revenkova E, Jessberger R, Hassold TJ, Hunt PA. 2005. SMC1 beta-deficient female mice provide evidence that cohesins are a missing link in age-related nondisjunction. Nature Genetics 37: 1351-1355.
    • (2005) Nature Genetics , vol.37 , pp. 1351-1355
    • Hodges, C.A.1    Revenkova, E.2    Jessberger, R.3    Hassold, T.J.4    Hunt, P.A.5
  • 14
    • 1942452749 scopus 로고    scopus 로고
    • Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae
    • Kellis M, Birren BW, Lander ES. 2004. Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae. Nature 428: 617-624.
    • (2004) Nature , vol.428 , pp. 617-624
    • Kellis, M.1    Birren, B.W.2    Lander, E.S.3
  • 15
    • 0018056131 scopus 로고
    • Levels of organization of the DNA in eucaryotic chromosomes
    • Laemmli UK. 1978. Levels of organization of the DNA in eucaryotic chromosomes. Pharmacological Reviews 30: 469-476.
    • (1978) Pharmacological Reviews , vol.30 , pp. 469-476
    • Laemmli, U.K.1
  • 16
    • 33745874687 scopus 로고    scopus 로고
    • Origins and evolution of the recA/RAD51 gene family: Evidence for ancient gene duplication and endosymbiont gene transfer
    • Lin Z, Kong H, Nei M, Ma H. 2006. Origins and evolution of the recA/RAD51 gene family: Evidence for ancient gene duplication and endosymbiont gene transfer. Proceedings of the National Academy of Sciences USA 103: 10328-10333.
    • (2006) Proceedings of the National Academy of Sciences USA , vol.103 , pp. 10328-10333
    • Lin, Z.1    Kong, H.2    Nei, M.3    Ma, H.4
  • 17
    • 33748808998 scopus 로고    scopus 로고
    • Protein-based phylogenetic analysis by using hydropathy profile of amino acids
    • Liu N, Wang T. 2006. Protein-based phylogenetic analysis by using hydropathy profile of amino acids. FEBS Letters 580: 5321-5327.
    • (2006) FEBS Letters , vol.580 , pp. 5321-5327
    • Liu, N.1    Wang, T.2
  • 18
    • 0037387829 scopus 로고    scopus 로고
    • A two-fold scaffolding model for mitotic chromosome assembly
    • Maeshima K, Laemmli UK. 2003. A two-fold scaffolding model for mitotic chromosome assembly. Developmental Cell 4: 467-480.
    • (2003) Developmental Cell , vol.4 , pp. 467-480
    • Maeshima, K.1    Laemmli, U.K.2
  • 19
    • 0018581746 scopus 로고
    • Metaphase chromosome structure: Evidence for a radial loop model
    • Marsden MP, Laemmli UK. 1979. Metaphase chromosome structure: evidence for a radial loop model. Cell 17: 849-858.
    • (1979) Cell , vol.17 , pp. 849-858
    • Marsden, M.P.1    Laemmli, U.K.2
  • 20
    • 0032555919 scopus 로고    scopus 로고
    • The symmetrical structure of structural maintenance of chromosomes (SMC) and MukB proteins: Long, antiparallel coiled coils, folded at a flexible hinge
    • Melby TE, Ciampaglio CN, Briscoe G, Erickson HP. 1998. The symmetrical structure of structural maintenance of chromosomes (SMC) and MukB proteins: long, antiparallel coiled coils, folded at a flexible hinge. Journal of Cell Biology 142: 1595-1604.
    • (1998) Journal of Cell Biology , vol.142 , pp. 1595-1604
    • Melby, T.E.1    Ciampaglio, C.N.2    Briscoe, G.3    Erickson, H.P.4
  • 23
    • 22244481613 scopus 로고    scopus 로고
    • The structure and function of SMC and kleisin complexes
    • Nasmyth K, Haering CH. 2005. The structure and function of SMC and kleisin complexes. Annual Review of Biochemistry 74: 595-648.
    • (2005) Annual Review of Biochemistry , vol.74 , pp. 595-648
    • Nasmyth, K.1    Haering, C.H.2
  • 25
    • 0027097480 scopus 로고    scopus 로고
    • Niki H, Imamura R, Kitaoka M, Yamanaka K, Ogura T, Hiraga S. 1992. E. coli MukB protein involved in chromosome partition forms a homodimer with a rod-and-hinge structure having DNA binding and ATP/GTP binding activities. EMBO Journal 11: 5101-5109.
    • Niki H, Imamura R, Kitaoka M, Yamanaka K, Ogura T, Hiraga S. 1992. E. coli MukB protein involved in chromosome partition forms a homodimer with a rod-and-hinge structure having DNA binding and ATP/GTP binding activities. EMBO Journal 11: 5101-5109.
  • 27
    • 0034984843 scopus 로고    scopus 로고
    • A Caenorhabditis elegans cohesion protein with functions in meiotic chromosome pairing and disjunction
    • Pasierbek P, Jantsch M, Melcher M, Schleiffer A, Schweizer D, Loidl J. 2001. A Caenorhabditis elegans cohesion protein with functions in meiotic chromosome pairing and disjunction. Genes and Development 15: 1349-1360.
    • (2001) Genes and Development , vol.15 , pp. 1349-1360
    • Pasierbek, P.1    Jantsch, M.2    Melcher, M.3    Schleiffer, A.4    Schweizer, D.5    Loidl, J.6
  • 29
    • 0036888903 scopus 로고    scopus 로고
    • Linking sister chromatid cohesion and apoptosis: Role of Rad21
    • Pati D, Zhang N, Plon S-E. 2002. Linking sister chromatid cohesion and apoptosis: role of Rad21. Molecular Cell Biology 22: 8267-8277.
    • (2002) Molecular Cell Biology , vol.22 , pp. 8267-8277
    • Pati, D.1    Zhang, N.2    Plon, S.-E.3
  • 30
    • 0017652886 scopus 로고
    • The structure of histonedepleted metaphase chromosomes
    • Paulson JR, Laemmli UK. 1977. The structure of histonedepleted metaphase chromosomes. Cell 12: 817-828.
    • (1977) Cell , vol.12 , pp. 817-828
    • Paulson, J.R.1    Laemmli, U.K.2
  • 31
    • 13544264536 scopus 로고    scopus 로고
    • Mutation of the cohesin related gene PDS5 causes cell death with predominant apoptotic features in Saccharomyces cerevisiae during early meiosis
    • Ren QH, Yang H, Rosinski M, Conrad MN, Dreser ME, Guacci V, Zhang Z. 2005. Mutation of the cohesin related gene PDS5 causes cell death with predominant apoptotic features in Saccharomyces cerevisiae during early meiosis. Mutation Research 570: 163-173.
    • (2005) Mutation Research , vol.570 , pp. 163-173
    • Ren, Q.H.1    Yang, H.2    Rosinski, M.3    Conrad, M.N.4    Dreser, M.E.5    Guacci, V.6    Zhang, Z.7
  • 33
    • 29244489772 scopus 로고    scopus 로고
    • Keeping sister chromatids together: Cohesins in meiosis
    • Revenkova E, Jessberger R. 2005. Keeping sister chromatids together: cohesins in meiosis. Reproduction 130: 783-790.
    • (2005) Reproduction , vol.130 , pp. 783-790
    • Revenkova, E.1    Jessberger, R.2
  • 34
    • 0029360376 scopus 로고
    • The SMC proteins and the coming of age of the chromosome scaffold hypothesis
    • Saitoh N, Goldberg I, Earnshaw WC. 1995. The SMC proteins and the coming of age of the chromosome scaffold hypothesis. Bioessays 17: 759-766.
    • (1995) Bioessays , vol.17 , pp. 759-766
    • Saitoh, N.1    Goldberg, I.2    Earnshaw, W.C.3
  • 38
    • 0035980681 scopus 로고    scopus 로고
    • Prokaryotic structural maintenance of chromosomes (SMC) proteins: Distribution, phylogeny, and comparison with MukBs and additional prokaryotic and eukaryotic coiled-coil proteins
    • Soppa J. 2001. Prokaryotic structural maintenance of chromosomes (SMC) proteins: distribution, phylogeny, and comparison with MukBs and additional prokaryotic and eukaryotic coiled-coil proteins. Gene 278: 253-264.
    • (2001) Gene , vol.278 , pp. 253-264
    • Soppa, J.1
  • 39
    • 84940576803 scopus 로고    scopus 로고
    • Swofford DL. 2001. PAUP*: Phylogenetic analysis using parsimony *and other methods, Version 4.0 Beta. Sunderland, MA: Sinauer Associates
    • Swofford DL. 2001. PAUP*: Phylogenetic analysis using parsimony (*and other methods). Version 4.0 Beta. Sunderland, MA: Sinauer Associates.
  • 40
    • 34547781750 scopus 로고    scopus 로고
    • Tamura K, Dudley J, Nei M, Kumar S. 2007. MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0. Molecular Biology and Evolution 24: 1596-1599
    • Tamura K, Dudley J, Nei M, Kumar S. 2007. MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0. Molecular Biology and Evolution 24: 1596-1599.
  • 41
    • 33748760611 scopus 로고    scopus 로고
    • Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapman J, Chen GL, Cooper D, Coutinho PM, Couturier J, Covert S, Cronk Q, Cunningham R, Davis J, Degroeve S, Dejardin A, dePamphilis C, Detter J, Dirks B, Dubchak I, Duplessis S, Ehlting J, Ellis B, Gendler K, Goodstein D, Gribskov M, Grimwood J, Groover A, Gunter L, Hamberger B, Heinze B, Helariutta Y, Henrissat B, Holligan D, Holt R, Huang W, Islam-Faridi N, Jones S, Jones-Rhoades M, Jorgensen R, Joshi C, Kangasjarvi J, Karlsson J, Kelleher C, Kirkpatrick R, Kirst M, Kohler A, Kalluri U, Larimer F, Leebens-Mack J, Leple JC, Locascio P, Lou Y, Lucas S, Martin F, Montanini B, Napoli C, Nelson D-R, Nelson C, Nieminen K, Nilsson O, Pereda V, Peter G, Philippe R, Pilate G, Poliakov A, Razumovskaya J, Richardson P, Rinaldi C, Ritland K, Rouze
    • Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapman J, Chen GL, Cooper D, Coutinho PM, Couturier J, Covert S, Cronk Q, Cunningham R, Davis J, Degroeve S, Dejardin A, dePamphilis C, Detter J, Dirks B, Dubchak I, Duplessis S, Ehlting J, Ellis B, Gendler K, Goodstein D, Gribskov M, Grimwood J, Groover A, Gunter L, Hamberger B, Heinze B, Helariutta Y, Henrissat B, Holligan D, Holt R, Huang W, Islam-Faridi N, Jones S, Jones-Rhoades M, Jorgensen R, Joshi C, Kangasjarvi J, Karlsson J, Kelleher C, Kirkpatrick R, Kirst M, Kohler A, Kalluri U, Larimer F, Leebens-Mack J, Leple JC, Locascio P, Lou Y, Lucas S, Martin F, Montanini B, Napoli C, Nelson D-R, Nelson C, Nieminen K, Nilsson O, Pereda V, Peter G, Philippe R, Pilate G, Poliakov A, Razumovskaya J, Richardson P, Rinaldi C, Ritland K, Rouze P, Ryaboy D, Schmutz J, Schrader J, Segerman B, Shin H, Siddiqui A, Sterky F, Terry A, Tsai CJ, Uberbacher E, Unneberg P, Vahala J, Wall K, Wessler S, Yang G, Yin T, Douglas C, Marra M, Sandberg G, Van de Peer Y, Rokhsar D. 2006. The genome of black cottonwood, Populus trichocarpa (Torr. & Gray). Science 313: 1596-1604.
  • 42
    • 0042132009 scopus 로고    scopus 로고
    • A prokaryotic condensin/cohesin-like complex can actively compact chromosomes from a single position on the nucleoid and binds to DNA as a ring-like structure
    • Volkov A, Mascarenhas J, Andrei-Selmer C, Ulrich H-D, Grauman PL. 2003. A prokaryotic condensin/cohesin-like complex can actively compact chromosomes from a single position on the nucleoid and binds to DNA as a ring-like structure. Molecular Cell Biology 23: 5638-5650.
    • (2003) Molecular Cell Biology , vol.23 , pp. 5638-5650
    • Volkov, A.1    Mascarenhas, J.2    Andrei-Selmer, C.3    Ulrich, H.-D.4    Grauman, P.L.5
  • 43
    • 0142123197 scopus 로고    scopus 로고
    • Caenorhabditis elegans EVL-14/PDS-5 and SCC-3 are essential for sister chromatid cohesion in meiosis and mitosis
    • Wang F, Yoder J, Antoshechkin I, Han M. 2003. Caenorhabditis elegans EVL-14/PDS-5 and SCC-3 are essential for sister chromatid cohesion in meiosis and mitosis. Molecular and Cellular Biology 23: 7698-7707.
    • (2003) Molecular and Cellular Biology , vol.23 , pp. 7698-7707
    • Wang, F.1    Yoder, J.2    Antoshechkin, I.3    Han, M.4
  • 44
    • 0033614934 scopus 로고    scopus 로고
    • Cohesin Rec8 is required for reductional chromosome segregation at meiosis
    • Watanabe Y, Nurse P. 1999. Cohesin Rec8 is required for reductional chromosome segregation at meiosis. Nature 400: 461-464.
    • (1999) Nature , vol.400 , pp. 461-464
    • Watanabe, Y.1    Nurse, P.2
  • 45
    • 33947717313 scopus 로고    scopus 로고
    • The Aurora kinase Ipll maintains the centromeric localization of PP2A to protect cohesin during meiosis
    • Yu H-G, Koshland D. 2007. The Aurora kinase Ipll maintains the centromeric localization of PP2A to protect cohesin during meiosis. Journal of Cell Biology 176: 911-918.
    • (2007) Journal of Cell Biology , vol.176 , pp. 911-918
    • Yu, H.-G.1    Koshland, D.2
  • 46
    • 33644839301 scopus 로고    scopus 로고
    • The rice OsRad21-4, an orthologue of yeast Rec8 protein, is required for efficient meiosis
    • Zhang L, Tao J, Wang S, Chong K, Wang T. 2006. The rice OsRad21-4, an orthologue of yeast Rec8 protein, is required for efficient meiosis. Plant Molecular Biology 60: 533-554.
    • (2006) Plant Molecular Biology , vol.60 , pp. 533-554
    • Zhang, L.1    Tao, J.2    Wang, S.3    Chong, K.4    Wang, T.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.