Segregation distortion and its effect on genetic mapping in plants

Chinese Journal of Agricultural Biotechnology

Volumn 3, Issue 3, 2006, Pages 163-169

  Xian Liang, Song ^a,b   Xue Zhen, Sun ^b   Tian Zhen, Zhang ^a  

^a NANJING AGRICULTURAL UNIVERSITY   (China)

^b SHANDONG AGRICULTURAL UNIVERSITY   (China)

Author keywords

genetic mapping; molecular tagging; segregation distortion

Indexed keywords

EID: 56549105053     PISSN: 14792362     EISSN: 14792370     Source Type: Journal    
DOI: 10.1079/CJB2006110     Document Type: Article

References (62)

1. Ajisaka H, Kuginuki Y, Shiratori M, Ishiguro K, Enomoto S and Hirai M (1999) Mapping of loci affecting the cultural efficiency of microspore culture of Brassica rapa L. syn. Campestris L. using DNA polymorphism. Breeding Science 49: 187–192.
2. Austin DF and Lee M (1996) Comparative mapping in F-2:3 and F-6:7 generations of quantitative trait loci for grain yield and yield components in maize. Theoretical Applied Genetics 92: 817–826.
3. Bentolila S, Hardy T, Guitton C and Freyssinet G (1992) Comparative genetic analyses of F2 plants and anther culture-derived plants of maize. Genome 35: 575–582.
4. Brummer EC, Bouton JH and Kochert G (1993) Development of an RFLP map in diploid alfalfa. Theoretical Applied Genetics 86: 329–332.
5. Buckler ES, Phelps-Durr IV TL, Buckler CSK, Dawe RK, Doebley JF and Holtsford TP (1999) Meiotic drive of chromosomal knobs reshaped the maize genome. Genetics 42: 326–335.
6. Byrne M, Murrell JC, Allen B and Moran GF (1995) An integrated genetic linkage map for eucalypts using RFLP, RAPD and isozyme markers. Theoretical Applied Genetics 91: 869–875.
7. Charlesworth B (1988) Driving genes and chromosomes. Nature 332: 394–395.
8. Cheng R, Saito A, Takano Y and Ukai Y (1996) Estimation of the position and effect of a lethal factor locus on a molecular marker linkage map. Theoretical Applied Genetics 93: 494–502.
9. Cloutier S, Cappadocia M and Landry BS (1995) Study of microspore-culture responsiveness in oilseed rape (Brassica napus L.) by comparative mapping of a F2 population and two microspore-derived populations. Theoretical Applied Genetics 91: 841–847.
10. Cloutier S, Cappadocia M and Landry BS (1997) Analysis of RFLP mapping inaccuracy in Brassica napus L. Genetics 95: 83–91.
11. de Villena FP-M and Sapienza C (2001) Female meiosis drives karyotypic evolution in mammals. Genetics 159: 1179–1189.
12. Fu YB and Ritland K (1994) On estimating the linkage of marker genes to viability genes controlling inbreeding depression. Theoretical Applied Genetics 88: 925–932.
13. Haanstra JPW, Wye C, Verbakel H, Meijer-Dekens F, van den Berg P, Odinot P, et al(1999) An integrated high density RFLP-AFLP map of tomato based on two Lycopersicon esculetum×L. pennellii F2 populations. Theoretical Applied Genetics 99: 254–271.
14. Han ZG, Guo WZ, Song XL and Zhang TZ (2004) Genetic mapping of EST-derived microsatellites from the diploid Gossypium arboreum in allotetraploid cotton. Molecular Genetics and Genomics 272: 308–327.
15. Harushima Y, Kurata N, Yano M, et al(1996) Detection of segregation distortions in an indica-japonica rice cross using a high-resolution molecular map. Theoretical Applied Genetics 92: 145–150.
16. Iwata N, Nagamatsu T and Omura J (1964) Abnormal segregation of waxy and apiculus coloration by a gametophyte gene belonging to the first linkage group in rice. Japanese Journal of Breeding 14: 33–39.
17. Kakani A, Saha VT, Zipf A and Stelly DM (1999) Genetic mechanism and chromosomal location of pollen-specific gene(s) in Gossypium. Crop Science 39: 668–673.
18. Kaló P, Endre G, Zimányi L and Csanádi G (2000) Construction of an improved linkage map of diploid alfalfa (Medicago sativa). Theoretical Applied Genetics 100: 641–657.
19. Kärkkäinen K, Koski V and Savolainen O (1996) Geographical variation in inbreeding depression in Scots pine. Evolution 50: 111–119.
20. Kazan K, Muehlbauer FS, Weeden NF and Ladizinsky G (1993) Inheritance and linkage relationships of morphological and isozyme loci in chickpea (Cicer arietinum L.). Theoretical Applied Genetics 86: 417–426.
21. Keim P, Schupp JM, Travis SE, et al(1997) A high-density soybean genetic map based on AFLP markers. Crop Science 37: 537–543.
22. Kesseli RV, Paran I and Michelmore RW (1994) Analysis of a detailed genetic linkage map of Lactuca sativa (Lettuce) constructed from RFLP and RAPD markers. Genetics 136: 1435–1446.
23. Kianian SF and Quiros CF (1992) Generation of a Brassica oleracea composite RFLP map: linkage arrangements among various populations and evolutionary implications. Theoretical Applied Genetics 84: 544–554.
24. Konishi T, Yano Y and Abe K (1992) Geographic distribution of alleles at the Ga2 locus for segregation distortion in barley. Theoretical Applied Genetics 85: 419–422.
25. Kreike DD and Stiekema WJ (1997) Reduced recombination and distorted segregation in a Solanum tuberosum (2×)×S. spegazzinii (2×) hybrid. Genome 40: 180–187.
26. Ky CL, Barre P, Lorieux M, et al(2000) Interspecific genetic linkage map, segregation distortion and genetice conversion in coffee (Coffea sp.). Theoretical Applied Genetics 101: 669–676.
27. Lashermes P, Combes MC, Prakash NS, Trouslot P, Lorieux M and Charrier A (2001) Genetic linkage map of Coffea canephora: effect of segregation distortion and analysis of recombination rate in male and female meiosis. Genome 44(4): 589–596.
28. Liedl B and Anderson NO (1993) Reproductive barriers: identification, uses and circumvention. Plant Breeding Reviews 11: 11–54.
29. Lin SY and Ikehashi H (1993) A gamete abortion locus detected by segregation distortion of isozyme locus Est-9 in wide crosses of rice (Oryza sativa L.). Euphytica 67: 35–40.
30. Liu F, Wu XL and Chen SY (2000) Segregation distortion of molecular markers in recombinant inbred populations in soybean (G. max). Acta Genetica Sinica 27: 883–887.
31. Lorieux M, Goffinet B, Perrier X, Gonzalez D de L and Lanaud C (1995a) Maximum-likelihood models for mapping genetic markers showing segregation distortion. 1. Backcross populations. Theoretical Applied Genetics 90: 73–80.
32. Lorieux M, Perrier X, Goffinet B, Lanaud C and Gonzalez D de L (1995b) Maximum-likelihood models for mapping genetic markers showing segregation distortion. 2. F2 populations. Theoretical Applied Genetics 90: 81–89.
33. Lu H, Romero-Severson J and Bernardo R (2002) Chromosomal regions associated with segregation distortion in maize. Theoretical Applied Genetics 105: 622–628.
34. Mangelsdorf PC and Jones DF (1926) The expression of Mendelian factors in the gametophyte of maize. Genetics 11: 423–455.
35. Manly KF (1994) Establishing genetic linkage using recombinant inbred lines with an abnormal segregation ratio. Genetics 136: 1433–1434.
36. Matsushita S, Iseki T, Fukuta Y, et al(2003) Characterization of segregation distortion on chromosome 3 induced in wide hybridization between indica and japonica type rice varieties. Euphytica 134: 27–32.
37. Mitchell-Olds T (1995) Interval mapping of viability loci causing heterosis in Arabidopsis. Genetics 140: 1105–1109.
38. Murigneux A, Baud S and Beckert M (1993) Molecular and morphological evaluation of doubled-haploid lines in maize. 2. Comparison with single-seed descent lines. Theoretical Applied Genetics 87: 278–287.
39. Paterson AH, Damon S, Hewitt JD, et al(1991) Mendelian factors underlying quantitative traits in tomato: Comparative across species, generations, and environments. Genetics 127: 181–197.
40. Pawlowshi WP, Torbert KA, Rines HW and Somers DA (1998) Irregular patterns of transgene silencing in allohexaploid oat. Plant Molecular Biology 38: 597–607.
41. Pereira MG, Lee M, Bramel-Cox P, Woodman W, Doebley J and Whitkus R (1994) Construction of an RFLP map in sorghum and comparative mapping in maize. Genome 37: 236–243.
42. Perfectti F and Pascual L (1996) Segregation distortion of isozyme loci in cherimoya (Annona cherimola Mill). Theoretical Applied Genetics 93: 440–446.
43. Pillen K, Steinrücken G, Herrmann RG and Jung C (1993) An extended linkage map of sugar beet (Beta vulgaris L.) including nine putative lethal genes and the restorer gene. X. Plant Breeding 111: 265–272.
44. Prince IP, Pochard E and Tanksley SD (1993) Construction of a molecular map of pepper and a comparison of synteny with tomato. Genome 36: 404–417.
45. Quillet M, Madjidian N, Griveau Y, et al(1995) Mapping genetic factors controlling pollen viability in interspecific cross in Helianthus sect. Helianthus. Theoretical Applied Genetics 91: 1195–1202.
46. Reinisch AJ, Dong JM, Brubaker CL, Stelly DM, Wendel JF and Paterson AH (1994) A detailed RFLP map of cotton, Gossypium hirsutum×Gossypium barbadense: chromosome organization and evolution in a disomic polyploid genome. Genetics 138: 829–847.
47. Sandbrink JM, van Oijen JM, Purimahua CC, Vrielink M, Verkerk R and Lindhout P (1995) Localization of genes for bacterial resistance in Lycopersicon peruvianum using RFLPs. Theoretical Applied Genetics 90: 444–450.
48. Senior ML, Chin CL, Lee M, et al(1996) Simple sequence repeat markers developed from maize sequence found in the genebank database. Map Construction 36: 1676–1683.
49. Sibov ST, de Souza CL Jr, Garcia AAF, et al(2003) Molecular mapping in tropical maize (Zea mays L.) using microsatellite markers. 1. Map construction and localization of loci showing distorted segregation. Hereditas 139: 96–106.
50. Smith JSC, Chin ECL, Shu H, et al(1997) An evaluation of the utility of SSR loci as molecular markers in maize (Zea mays L.): comparisons with data from RFLPs and pedigree. Theoretical Applied Genetics 95: 163–173.
51. Song XL, Wang K, Guo WZ, Zhang J and Zhang TZ (2005) A comparison of genetic maps constructed from haploid and BC1 mapping populations from the same crossing between Gossypium hirsutum L.×G. barbadense L. Genome 48(3): 378–390.
52. Taylor DR and Ingvarsson PK (2003) Common features of segregation distortion in plants and animals. Genetica 117: 27–35.
53. Tonguc M, Earle ED and Griffiths PD (2003) Segregation distortion of Brassica carinata derived black rot resistance in Brassica oleracea. Euphytica 134: 269–276.
54. Vogl C and Xu S (2000) Multipoint mapping of viability of segregation distorting loci using molecular markers. Genetics 155: 1439–1447.
55. Vuylstecke M, Mank R, Antonise R, et al(1999) Two high density AFLP linkage maps of Zea mays L.: analysis of distribution of AFLP markers. Theoretical Applied Genetics 99: 921–935.
56. Wang YJ, Wu XL, He CY, Zhang JS, Chen S and Gai JY (2003) A soybean genetic map constructed after the population being tested and adjusted. Scientia Agricultica Sinica 11: 1254–1260.
57. Wang YJ, Wu XL, Yu DY, Zhang YM, Chen SY and Gai JY (2004) Method of evaluation and adjustment of recombinant inbred line population and its application to the soybean RIL population NJRIKY. Acta Agronomica Sinica 30(5): 413–418.
58. Wu XL, He CY, Wang YJ, et al(2001) Construction and analysis of a genetic linkage map of soybean. Acta Botanica Sinica 11: 1051–1061.
59. Xu Y, Zhu L, Xiao J, Huang N and McCouch SR (1997) Chromosomal regions associated with segregation distortion of molecular markers in F2, backcross, double haploid, and recombinant inbred populations in rice (Oryza sativa L.). Molecular and General Genetics 253: 535–545.
60. Yan JB, Tang H, Huang YQ, Zheng YL and Li JS (2003) Genetic analysis of segregation distortion of molecular markers in maize F2 population. Acta Genetica Sinica 10: 913–918.
61. Young WP, Schupp JM and Kein P (1999) DNA methylation and AFLP distribution in the soybean genome. Theoretical Applied Genetics 99: 785–790.
62. Zhang FL, Aoki S and Takahata Y (2003) RAPD markers linked to microspore embryogen ability in Brassica crops. Euphytica 131: 207–213.