Construction of an improved linkage map of diploid alfalfa (Medicago sativa)

Theoretical and Applied Genetics

Volumn 100, Issue 5, 2000, Pages 641-657

  Kalo P ^a   Endre, G ^a   Zimanyi L ^a   Csanadi G ^a   Kiss, G B ^a  

^a INSTITUTE OF EXPERIMENTAL MEDICINE   (Hungary)

Author keywords

Distorted segregation; Linkage map; Medicago sativa

Indexed keywords

DIPLOIDY; GENE LOCUS; GENE MAPPING; GENETIC CORRELATION; GENETIC DISTANCE; GENETIC MARKER; GENOTYPE; HETEROZYGOSITY; HYBRID; LINKAGE GROUP; MEDICAGO SATIVA; RIBOSOMAL DNA; SEGREGATION DISTORTION; SELFING;

EMBRYOPHYTA; MEDICAGO SATIVA;

EID: 0034009419     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s001220051335     Document Type: Article

References (74)

1. Allard RW (1956) Formulas and tables to facilitate the calculation of recombination values in heredity. Hilgardia 24:235-278
2. Arumuganathan K, Earle ED (1991) Nuclear DNA content of some important plant species. Plant Mol Biol Rep 9:208-219
3. Bailey NTJ (1949) The estimation of linkage with differential viability, II and III. Heredity 3:220-228
4. Barcziszewska MZ, Nalaskowska M, Mashkova TD, Kisselev LL, Barcziszewski J (1987) Heterogenity in the 3′-portion of Papilionaceae 5S rRNAs. The primary structure of alfalfa 5S rRNA. Nucleic Acids Res 15:362
5. Barnett MJ, Long SR (1990) Nucleotide sequence of an alfalfa calmodulin cDNA. Nucleic Acids Res 18:3395
6. Bauchan GR, Campbell TA (1994) Use of an image analysis system to karyotype diploid alfalfa (Medicago sativa L.). J Hered 85:18-22
7. 2 plants and anther culture derived plants of maize. Genome 35:575-582
8. Bernatzky R, Tanksley SD (1986) Majority of random cDNA clones correspond to single loci in the tomato genome. Mol Gen Genet 203:8-14
9. Brummer EC, Kochert G, Bouton JH (1991) RFLP variation in diploid and tetraploid alfalfa. Theor Appl Genet 83:89-96
10. Brummer EC, Bouton JH, Kochert G (1993) Development of an RFLP map in alfalfa. Theor Appl Genet 86:329-332
11. Charrier B, Coronado C, Kondorosi Á, Ratet P (1995) Molecular characterization and expression of alfalfa (Medicago sativa L.) flavanone-3-hydroxylase and dihydroflavonol-4-reductase encoding genes. Plant Mol Biol 29:773-786
12. Crespi MD, Jurkevitch E, Poiret M, d'Aubenton Carafa Y, Petrovics G, Kondorosi É, Kondorosi Á (1994) enod40, a gene expressed during nodule organogenesis, codes for a non-translatable RNA involved in plant growth. EMBO J 13:5099-5112
13. Csanádi G, Szécsi J, Kaló P, Kiss P, Endre G, Kondorosi Á, Kondorosi É, Kiss GB (1994) ENOD12, an early nodulin gene, is not required for nodule formation and efficient nitrogen fixation in alfalfa. Plant Cell 6:201-213
14. Davidowitz EJ, Creissen G, Vincze É, Kiss GB, Lang-Unnasch N (1991) Sequence analysis of alfalfa (Medicago sativa) leghemoglobin cDNA and genomic clones. Plant Mol Biol 16:161-165
15. Dellaporta SL, Wood J, Hicks JB (1983) A plant DNA minipreparation: Version II. Plant Mol Biol Rep 1:19-21
16. Dickstein R, Bisseling T, Reinhold VN, Ausubel FM (1988) Expression of nodule-specific genes in alfalfa root nodules blocked at an early stage of development. Genes Dev 2:677-687
17. Dickstein R, Scheirer DC, Fowle WH, Ausubel FM (1991) Nodules elicited by Rhizobium meliloti heme mutants are arrested at an early stage of development. Mol Gen Genet 230:423-432
18. Dickstein R, Prusty R, Peng T, Ngo W, Smith ME (1993) Enod8, a novel early nodule-specific gene, is expressed in empty alfalfa nodules. Mol Plant-Microbe Interaction 6:715-721
19. Domoney C, Casey R (1985) Measurement of gene number for seed storage proteins in Pisum. Nucleic Acids Res 13:687-699
20. Doorsselaere JV, Baucher M, Feuillet C, Boudet AM, Van Montagu M, Inzé D (1995) Isolation of cinnamyl alcohol dehydrogenase cDNAs from two important economic species:alfalfa and poplar. Demonstration of a high homology of the gene within angiosperms. Plant Physiol Biochem 33:105-109
21. Dunn K, Dickstein R, Feinbaum R, Burnett BK, Petermann TK, Thoidis G, Goodman HM, Ausubel FM (1988) Developmental regulation of nodule-specific genes in alfalfa root nodules. Mol Plant-Microbe Interaction 1:66-74
22. Echt CS, Erdahl LA, McCoy TJ (1992) Genetic segregation of random amplified polymorphic DNA in diploid cultivated alfalfa. Genome 35:84-87
23. Echt CS, Kidwell KK, Knapp SJ, Osborn TC, McCoy TJ (1994) Linkage mapping in diploid alfalfa (Medicago sativa). Genome 37:61-71
24. Endre G, Kaló P, Hangyel Tárczy M, Csanádi G, Kiss GB (1996) Reducing the tetraploid non-nodulating alfalfa (Medicago sativa) MnNC-1008(NN) germ plasm to the diploid level. Theor Appl Genet 93:1061-1065
25. Falistocco E, Falcinelli M, Veronesi F (1995) Karyotype and C-banding pattern of mitotic chromosomes in alfalfa, Medicago sativa L. Plant Breed 114:451-453
26. Feinberg AP, Vogelstein B (1983) A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 132:6-13
27. Gou L, Paiva NL (1995) Molecular cloning and expression of alfalfa (Medicago sativa_L.) vestitone reductase, the penultimate enzyme on medicarpin biosynthesis. Arch Biochem Biophys 320:353-360
28. Gregerson RG, Miller SS, Twary SN, Gantt JS, Vance C (1993) Molecular characterization of NADH-dependent glutamate synthase from alfalfa nodules. Plant Cell 5:215-226
29. Györgyey J, Gartner A, Németh K, Magyar Z, Hirt H, Heberle-Bors E, Dudits D (1991) Alfalfa heat shock genes are differentially expressed during somatic embryogenesis. Plant Mol Biol 16:999-1007
30. Hanson AA, Barnes DK, Hill RR (eds) (1988) Alfalfa and alfalfa improvement. American Society of Agronomy. Crop Science Society of America, Soil Science of America, Madison, Wis
31. Harrison MJ (1996) A sugar transporter from Medicago truncatula: altered expression in roots during vesicular-arbuscular (VA) mycorrhizal associations. Plant J 9:491-503
32. Hebert PDN, Beaton MJ (1989) Methodologies for allozyme analysis using cellulose acetate electrophoresis. Helena Laboratories, Beaumont, Tex
33. Helentjaris T, Slocum M, Wright S, Schaefer A, Nienhuis J (1986) Construction of genetic linkage maps in maize and tomato using resctriction fragment length polymorphisms. Theor Appl Genet 72:761-769
34. 2 populations with distorted single gene segregation. Biom J 4:397-406
35. Hirt H, Páy A, Bögre L, Meskiene I, Heberle-Bors E (1993) cdc2MsB, a cognate cdc2 gene from alfalfa, complements the G1/S but not the G2/M transition of budding yeast cdc28 mutants. Plant J 4:61-69
36. Jonak C, Páy A, Bögre L, Hirt H, Heberle-Bors E (1993) The plant homologue of MAP kinase is expressed in a cell cycle-dependent and organ specific manner. Plant J 3:611-617
37. Jonak C, Heberle-Bors E, Hirt H (1995) A cDNA from Medicago sativa encodes a protein homologous to small GTP-binding proteins. Plant Physiol 107:263-264
38. Kesseli RV, Paran I, Michelmore RW (1994) Analysis of a detailed genetic linkage map of Lactuca sativa (Lettuce) constructed from RFLP and RAPD markers. Genetics 136: 1435-1446
39. Kiss GB, Amin AA, Pearlman RE (1981) Two separate regions of the extrachromosomal ribosomal deoxyribonucleic acid of Tetrahymena thermophila enable autonomous replication of plasmids in Saccharomyces cerevisiae. Mol Cell Biol 1:535-543
40. Kiss GB, Csanádi G, Kálmán K, Kaló P, Ökrész L (1993) Construction of a basic genetic map for alfalfa using RFLP, RAPD, isozyme and morphological markers. Mol Gen Genet 238:129-137
41. Kiss GB, Kereszt A, Kiss P, Endre G (1998) Colormapping: a non-mathematical procedure for genetic mapping. Acta Biol Hun 49:125-142
42. Konieczny A, Ausubel FM (1993) A procedure for mapping Arabidopsis mutations using co-dominant ecotype-specific PCR-based markers. Plant J 4:403-410
43. Lander ES, Green P, Abrahamson J, Barlow A, Daly MJ, Lincoln SE, Newburg L (1987) MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1:174-181
44. Landry BS, Kesseli RV, Farrara B, Michelmore RW (1987) A genetic map of lettuce (Lactuca sativa L.) with restriction fragment length polymorphism, isozyme, disease resistance and morphological markers. Genetics 116:331-337
45. Landry BS, Hubert N, Etoh T, Harada JJ, Lincoln SE (1991) A genetic map for Brassica napus based on restriction fragment length polymorphisms detected with expressed DNA sequences. Genome 34:543-552
46. Liaud MF, Brinkmann H, Cerff R (1992) The β-tubulin gene family of pea: primary structures, genomic organization and intron dependant evolution of genes. Plant Mol Biol 18:639-651
47. Lincoln S, Daly M, Lander E (1992) Constructing genetic maps with MAPMAKER/EXP 3.0 Whitehead Institute Technical Report, 3rd edn.
48. 2 populations. Theor Appl Genet 90:81-89
49. Lough TJ, Reddington BD, Grant MR, Hill DF, Reynolds PHS, Farnden KJF (1992) The isolation and characterization of a cDNA clone encoding L-asparaginase from developing seeds of lupin (Lupinus arboreus). Plant Mol Biol 19:391-399
50. Löbler M, Hirsch AM (1992) An alfalfa (Medicago sativa L.) cDNA encoding an acidic leghemoglobin (MsLb3). Plant Mol Biol 20:733-736
51. Löbler M, Hirsch AM (1993) A gene that encodes a proline-rich nodulin with limited homology to PsENOD12 is expressed in the invasion zone of Rhizobium meliloti-induced alfalfa root nodules. Plant Physiol 103:21-30
52. Maniatis T, Fritsch EF, Sambrook J (1982) Molecular cloning: a laboratory manual. Cold Spring Laboratory Press, New York
53. Maxwell CA, Harrison MJ, Dixon RA (1993) Molecular characterization and expression of alfalfa isoliquiritigenin 2'-O-methyltransferase, an enzyme specifically involved in the biosynthesis of an inducer of Rhizobium meliloti nodulation genes. Plant J 4:971-981
54. McCoy TJ, Bingham ET (1988) Cytology and cytogenetics of alfalfa. In: Hanson AA, Barnes DK, Hill RR (eds) Alfalfa and alfalfa improvement. American Society of Agronomy, Crop Science Society of America, Soil Science of America, Madison, Wis., pp 737-776
55. McGurl B, Swarup M, Kahn M, Ryan CA (1995) Characterization of two proteinase inhibitor (ATI) cDNAs from alfalfa leaves (Medicago sativa var. Vernema): the expression of ATI genes in response to wounding and soil microorganisms. Plant Mol Biol 27:995-1001
56. McKhann HI, Hirsch AM (1994) Isolation of chalcone synthase and chalcone isomerase cDNAs from alfalfa (Medicago sativa L.): highest transcript levels occur in young roots and root tips. Plant Mol Biol 24:767-777
57. Paran I, Michelmore RW (1993) Development of reliable PCR-based markers linked to downy mildew resistance genes in lettuce. Theor Appl Genet 85:985-993
58. Pay A, Jonak C, Bögre L, Meskiene I, Mairinger T, Szalay A, Heberle-Bors E, Hirt H (1993) The MsK family of alfalfa protein kinase genes encodes homologues of shaggy/glycogen synthase kinase-3 and shows differential expression pattrens in plant organs and development. Plant J 3:847-856
59. Pham JL, Glaszmann JC, Sano R, Barbier P, Ghesquiére A, Second G (1990) Isozyme markers in rice: genetic analysis and linkage relationships. Genome 33:348-359
60. Pillen K, Steinrücken G, Herrmann RG, Jung C (1993) An extended linkage map of sugar beet (Beta vulgaris L.) including nine putative lethal genes and the restorter gene. X. Plant Breed 111:265-272
61. Pirck M, Hirt H, Heberle-Bors E (1994) The cDNA sequence encoding an annexin from Medicago sativa. Plant Physiol 104:1463-1464
62. Pramanik SK, Bewley JD (1993) A ubiquitin carrier preotein cDNA from developing alfalfa embryos. Plant Physiol 102:1049-1050
63. Prince JP, Pochard E, Tanksley SD (1993) Construction of a molecular linkage map of pepper and a comparison of synteny with tomato. Genome 36:404-417
64. Quiros FC, Bauchan GR (1988) The genus Medicago and the origin of the Medicago sativa complex. In: Hanson AA, Barnes DK, Hill RR (eds) Alfalfa and alfalfa improvement. American Society of Agronomy, Crop Science Society of America, Soil Science of America, Madison, Wis., pp 93-124
65. Sanger F, Nicklen S, Coulson AR (1977) DNA sequencing with the chain terminating inhibitors. Proc Natl Acad Sci USA 74:5463-5467
66. Savouré A, Fehér A, Kaló P, Petrovics G, Csanádi G, Szécsi J, Kiss G, Brown S, Kondorosi Á, Kondorosi É (1995) Isolation of a full-length mitotic cyclin cDNA clone CycIIIMs from Medicago sativa: Chromosomal mapping and expression. Plant Mol Biol 27:1059-1070
67. Schaff DA, Koehler SM, Matthews BF, Bauchan GR (1990) In situ hybridization of β-tubulin to alfalfa chromosomes. J Hered 81:479-483
68. Scheres DA, Van Engelen F, Van Der Knaap E, Van De Wiel C, Van Kammen A, Bisseling T (1990) Sequential induction of nodulin gene expression in the developing pea nodule. Plant Cell 2:687-700
69. Southern EM (1975) Detection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol 98:503-517
70. Stanford AC, Larsen K, Barker DG, Cullimore JV (1993) Differential expression within the glutamine synthetase gene family of the model legume Medicago truncatula. Plant Physiol 103:73-81
71. Sun Y, Skinner DZ (1994) A phylogeny of Medicago species based on ribosomal DNA sequences. In: Michaud R, Elgin JH (eds), Rep 34th N Am Alfalfa Improve Conf. Guelph, Ont, Canada, p 65
72. Wendel JF, Weeden NF (1989) Visualization and interpretation of plant isozymes. In: Soltis DE, Soltis PS (eds) Isozymes in plant biology. Dioscorides Press, Portland, Oreg, pp 5-45
73. Williams JGK, Kubelik AR, Livak KJ, Rafalski JA, Tingey SV (1990) DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res 18:6531-6535
74. Winicov I, Maki DH, Waterborg JH, Riehm MR, Harrington RE (1988) Characterisation of the alfalfa (Medicago sativa) genome by DNA reassociation. Plant Mol Biol 10:369-371