Across the southern Andes on fin: Glacial refugia, drainage reversals and a secondary contact zone revealed by the phylogeographical signal of Galaxias platei in Patagonia

Molecular Ecology

Volumn 17, Issue 23, 2008, Pages 5049-5061

  Zemlak, Tyler S ^a   Habit, Evelyn M ^b   Walde, Sandra J ^a   Battini, Miguel A ^c   Adams, Emily D M ^a   Ruzzante, Daniel E ^a  

^a DALHOUSIE UNIVERSITY   (Canada)

^b CENTRO DE INVESTIGACIÓN EN ECOSISTEMAS DE LA PATAGONIA CIEP   (Chile)

^c Universidad Nacional de Comahue   (Argentina)

Author keywords

Drainage reversal; Galaxias platei; Orogeny; Phylogeography; Pleistocene glacial cycles; Secondary contact

Indexed keywords

MITOCHONDRIAL DNA;

ANIMAL; ARGENTINA; ARTICLE; CHILE; CLIMATE; DNA SEQUENCE; GENETIC VARIABILITY; GENETICS; GEOGRAPHY; HAPLOTYPE; ICE COVER; MOLECULAR EVOLUTION; OSMERIFORMES; PHYLOGENY; POPULATION GENETICS;

ANIMALS; ARGENTINA; CHILE; CLIMATE; DNA, MITOCHONDRIAL; EVOLUTION, MOLECULAR; GENETIC VARIATION; GENETICS, POPULATION; GEOGRAPHY; HAPLOTYPES; ICE COVER; OSMERIFORMES; PHYLOGENY; SEQUENCE ANALYSIS, DNA;

GALAXIAS PLATEI; GALAXIIDAE; PISCES;

EID: 56549100708     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/j.1365-294X.2008.03987.x     Document Type: Article

References (58)

1. Allnutt TR, Newton AC, Lara A et al 1999) Genetic variation in Fitzroya cupressoides (alerce), a threatened South American conifer. Molecular Ecology, 8, 975 987.
2. Avila LJ, Morando M, Sites JW (2006) Congeneric phylogeography: hypothesizing species limits and evolutionary processes in Patagonian lizards of the Liolaemus boulengeri group (Squamata: Liolaemini). Biological Journal of the Linnean Society, 89, 241 275.
3. Bernatchez L, Wilson CC (1998) Comparative phylogeography of nearctic and palearctic fishes. Molecular Ecology, 7, 431 452.
4. Bowen BW, Muss A, Rocha LA, Grant WS (2006) Shallow mtDNA coalescence in Atlantic pygmy angelfishes (genus Centropyge) indicates a recent invasion from the Indian Ocean. Journal of Heredity, 97, 1 12.
5. Burridge CP, Craw D, Waters JM (2006) River capture, range expansion, and cladogenesis: the genetic signature of freshwater vicariance. Evolution, 60, 1038 1049.
6. Burridge CP, Craw D, Waters JM (2007) An empirical test of freshwater vicariance via river capture. Molecular Ecology, 16, 1883 1895.
7. Burridge CP, Craw D, Fletcher D, Waters JM (2008) Geological dates and molecular rates: fish DNA sheds light on time dependency. Molecular Biology and Evolution, 25, 624 633.
8. Clapperton CM (1993) Quaternary Geology and Geomorphology of South America. Elsevier, Amsterdam, The Netherlands.
9. Craw D, Waters J (2007) Geological and biological evidence for regional drainage reversal during lateral tectonic transport, Marlborough, New Zealand. Journal of the Geological Society, 164, 785 793.
10. Craw D, Burridge C, Waters J (2007) Geological and biological evidence for drainage reorientation during uplift of alluvial basins, central Otago, New Zealand. New Zealand Journal of Geology and Geophysics, 50, 367 376.
11. Croizat L, Nelson G, Rosen DE (1974) Centers of origin and related concepts. Systematic Zoology, 23, 265 287.
12. Cussac V, Ortubay S, Iglesias G et al 2004) The distribution of South American galaxiid fishes: the role of biological traits and post-glacial history. Journal of Biogeography, 31, 103 121.
13. Dyer B (2000) Systematic review and biogeography of the freshwater fishes of Chile. Estudios Oceanologicos, 19, 77 98.
14. Edwards SV, Beerli P (2000) Perspective: gene divergence, population divergence, and the variance in coalescence time in phylogeographic studies. Evolution, 54, 1839 1854.
15. Elphinstone MS, Hinten GN, Anderson MJ, Nock CJ (2003) An inexpensive and high-throughput procedure to extract and purify total genomic DNA for population studies. Molecular Ecology Notes, 3, 317 320.
16. Excoffier L, Laval G, Schneider S (2005) Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online, 1, 47 50.
17. Grant WS, Bowen BW (1998) Shallow population histories in deep evolutionary lineages of marine fishes: insights from sardines and anchovies and lessons for conservation. Journal of Heredity, 89, 415 426.
18. Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series, 41, 95 98.
19. Hare MP (2001) Prospects of nuclear gene phylogeography. Trends in Ecology & Evolution, 16, 700 706.
20. Heusser CJ, Lowell TV, Heusser LE, Moreira A, Moreira S (2000) Pollen sequence from the Chilean Lake District during the Llanquihue glaciation in marine oxygen isotopes stages 4-2. Journal of Quaternary Science, 15, 115 125.
21. Himes CMT, Gallardo MH, Kenagy GJ (2008) Historical biogeography and post-glacial recolonization of South American temperate rain forest by the relictual marsupial Dromiciops gliroides. Journal of Biogeography, 35, 1415 1424.
22. Huelsenbeck JP, Ronquist F (2001) MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics, 17, 754 755.
23. Kim I, Phillips CJ, Monjeau JA et al 1998) Habitat islands, genetic diversity, and gene flow in a Patagonian rodent. Molecular Ecology, 7, 667 678.
24. Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide-sequences. Journal of Molecular Evolution, 16, 111 120.
25. McCulloch RD, Bentley MJ, Purves RS et al 2000) Climatic inferences from glacial and palaeoecological evidence at the last glacial termination, southern South America. Journal of Quaternary Science, 15, 409 417.
26. McDowall RM (1971) Galaxiid fishes of South America. Zoological Journal of the Linnean Society, 50, 33 &.
27. McDowall RM (2006) Crying wolf, crying foul, or crying shame: alien salmonids and a biodiversity crisis in the southern cool-temperate galaxioid fishes? Reviews in Fish Biology and Fisheries, 16, 233 422.
28. Milano D, Cussac VE, Macchi PJ et al 2002) Predator associated morphology in Galaxias platei in Patagonian lakes. Journal of Fish Biology, 61, 138 156.
29. Milano D, Ruzzante DE, Cussac VE et al 2006) Latitudinal and ecological correlates of morphological variation in Galaxias platei (Pisces, Galaxiidae) in Patagonia. Biological Journal of the Linnean Society, 87, 69 82.
30. Morando M, Avila LJ, Baker J, Sites JW (2004) Phylogeny and phylogeography of the Liolaemus darwinii complex (Squamata: Liolaemidae): evidence for introgression and incomplete lineage sorting. Evolution, 58, 842 861.
31. Morando M, Avila LJ, Turner CR, Sites JW (2007) Molecular evidence for a species complex in the patagonian lizard Liolaemus bibronii and phylogeography of the closely related Liolaemus gracilis (Squamata: Liolaemini). Molecular Phylogenetics and Evolution, 43, 952 973.
32. Muellner AN, Tremetsberger K, Stuessy T, Baeza CM (2005) Pleistocene refugia and recolonization routes in the southern Andes: insights from Hypochaeris palustris (Asteraceae, Lactuceae). Molecular Ecology, 14, 203 212.
33. Nichols R (2001) Gene trees and species trees are not the same. Trends in Ecology & Evolution, 16, 358 364.
34. Nielsen JL, Tupper D, Thomas WK (1994) Mitochondrial DNA polymorphism in unique runs of Chinook salmon (Oncorhynchus tshawytscha) from the Sacramento-San Joaquin river basin. Conservation Biology, 8, 882 884.
35. Palma RE, Rivera-Milla E, Salazar-Bravo J et al 2005) Phylogeography of Oligoryzomys longicaudatus (Rodentia: Sigmodontinae) in temperate South America. Journal of Mammalogy, 86, 191 200.
36. Pastorino MJ, Gallo LA (2002) Quaternary evolutionary history of Austrocedrus chilensis, a cypress native to the Andean-Patagonian forest. Journal of Biogeography, 29, 1167 1178.
37. Perez-Losada M, Bond-Buckup G, Jara CG, Crandall KA (2004) Molecular systematics and biogeography of the southern South American freshwater 'crabs' Aegla (Decapoda: Anomura: Aeglidae) using multiple heuristic tree search approaches. Systematic Biology, 53, 767 780.
38. Posada D, Crandall KA (1998) ModelTest: testing the model of DNA substitution. Bioinformatics, 14, 817 818.
39. Premoli AC, Kitzberger T, Veblen TT (2000) Isozyme variation and recent biogeographical history of the long-lived conifer Fitzroya cupressoides. Journal of Biogeography, 27, 251 260.
40. Rabassa J (2008) Late Cenozoic Glaciations in Patagonia and Tierra del Fuego. In : The Late Cenozoic of Patagonia and Tierra Del Fuego (ed. Rabassa J). Developments in Quaternary Science, 11 (series ed. Van Der Meer JJM pp. 151 204. Elsevier, Amsterdam, The Netherlands.
41. Ramos VA (1989) Tbe birth of southern South America. American Scientist, 77, 444 450.
42. Ringuelet RA (1955) Vinculaciones faunísticas de la zona boscosa del Nahuel Huapi y el dominio zoogeográfico austral cordillerano. Ministerio de Educación de la Nación, Universidad Nacional de Eva Perón (Universidad Nacional de La Plata) Facultad de Ciencias NAturales y Museo. Notas del Museo. Tomo XVIII, Zoología N 160.
43. Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572 1574.
44. Rosen DE (1978) Vicariant patterns and historical explanation in biogeography. Systematic Zoology, 27, 159 188.
45. Ruzzante DE, Walde SJ, Cussac VE et al 2006) Phylogeography of the Percichthyidae (Pisces) in Patagonia: roles of orogeny, glaciation, and volcanism. Molecular Ecology, 15, 2949 2968.
46. Ruzzante DE, Walde SJ, Gosse JC et al 2008) Climate control on ancestral population dynamics: insight from Patagonian fish phylogeography. Molecular Ecology, 17, 2234 2244.
47. Sang TK, Chang HY, Chen CT, Hui CF (1994) Population-structure of the Japanese eel, Anguilla japonica. Molecular Biology and Evolution, 11, 250 260.
48. Smith MF, Kelt DA, Patton JL (2001) Testing models of diversification in mice in the Abrothrix olivaceus/xanthorhinus complex in Chile and Argentina. Molecular Ecology, 10, 397 405.
49. Soltis DE, Morris AB, McLachlan JS, Manos PS, Soltis PS (2006) Comparative phylogeography of unglaciated eastern North America. Molecular Ecology, 15, 4261 4293.
50. Tatur A, del Valle R, Bianchi MM et al 2002) Late Pleistocene palaeolakes in the Andean and Extra-Andean Patagonia at mid-latitudes of South America. Quaternary International, 89, 135 150.
51. Thompson JD, Higgins DG, Gibson TJ (1994) Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research, 22, 4673 4680.
52. Turner KJ, Fogwill CJ, McCulloch RD, Sugden DE (2005) Deglaciation of the eastern flank of the North Patagonian Icefield and associated continental-scale lake diversions. Geografiska Annaler Series A-Physical Geography, 87A, 363 374.
53. Victoriano PF, Ortiz JC, Benavides E, Adams BJ, Sites JW (2008) Comparative phylogeography of codistributed species of Chilean Liolaemus (Squamata: Tropiduridae) from the central-southern Andean range. Molecular Ecology, 17, 2397 2416.
54. Wakely J, Hey J (1997) Estimating ancestral population parameters. Genetics, 145, 847 855.
55. Ward RD, Zemlak TS, Innes BH, Last PR, Hebert PDN (2005) DNA barcoding Australia's fish species. Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences, 360, 1847 1857.
56. Waters JM, Wallis GP (2000) Across the Southern Alps by river capture? Freshwater fish phylogeography in South Island, New Zealand. Molecular Ecology, 9, 1577 1582.
57. Waters JM, Craw D, Youngson JH, Wallis GP (2001) Genes meet geology: fish phylogeographic pattern reflects ancient, rather than modern, drainage connections. Evolution, 55, 1844 1851.
58. Waters JM, Allibone RM, Wallis GP (2006) Geological subsidence, river capture, and cladogenesis of galaxiid fish lineages in central New Zealand. Biological Journal of the Linnean Society, 88, 367 376.