Historical biogeography and post-glacial recolonization of South American temperate rain forest by the relictual marsupial Dromiciops gliroides

Journal of Biogeography

Volumn 35, Issue 8, 2008, Pages 1415-1424

  Himes, Christopher M T ^a   Gallardo, Milton H ^b   Kenagy, G J ^a  

^a UNIVERSITY OF WASHINGTON   (United States)

^b UNIVERSIDAD AUSTRAL DE CHILE   (Chile)

Author keywords

Dromiciops gliroides; Genetic population structure; Historical biogeography; Pleistocene climate change; Pleistocene glaciation; Southern South America; Species range

Indexed keywords

BAYESIAN ANALYSIS; CLADISTICS; CLIMATE CHANGE; CLIMATE VARIATION; DEMOGRAPHY; GENE FLOW; GENETIC STRUCTURE; GLACIAL HISTORY; HYPOTHESIS TESTING; ISOLATED POPULATION; MARSUPIAL; MAXIMUM LIKELIHOOD ANALYSIS; MITOCHONDRIAL DNA; MUSEUM; PHYLOGENY; PLEISTOCENE; POPULATION BOTTLENECK; POSTGLACIAL; RAINFOREST; RECOLONIZATION; RELICT SPECIES; SKIN; SPATIAL VARIATION; TEMPERATE FOREST; VICARIANCE; ZOOGEOGRAPHY;

SOUTH AMERICA;

DROMICIOPS GLIROIDES; METATHERIA;

EID: 47949133699     PISSN: 03050270     EISSN: 13652699     Source Type: Journal    
DOI: 10.1111/j.1365-2699.2008.01895.x     Document Type: Article

References (50)

1. Allnutt, T.R., Newton, A.C., Lara, A., Premoli, A., Armesto, J.J., Vergara, R. Gardner, M. (1999) Genetic variation in Fitzroya cupressoides (alerce), a threatened South American conifer. Molecular Ecology, 8, 975 987.
2. Amico, G. Aizen, M.A. (2000) Mistletoe seed dispersal by a marsupial. Nature, 408, 929 930.
3. Arbogast, B.S. Kenagy, G.J. (2001) Comparative phylogeography as an integrative approach to historical biogeography. Journal of Biogeography, 28, 819 925.
4. Armesto, J.J., Rozzi, R., Smith-Ramírez, C. Arroyo, M.T.K. (1998) Conservation targets in South American temperate forests. Science, 282, 1271 1272.
5. Asher, R.J., Horovitz, I. Sánchez-Villagra, M.R. (2004) First combined cladistic analysis of marsupial mammal interrelationships. Molecular Phylogenetics and Evolution, 33, 240 250.
6. Avise, J.C. (2000) Phylogeography: the history and formation of species. Harvard University Press, Cambridge, MA.
7. Beerli, P. (1998) Estimation of migration rates and population sizes in geographically structured populations. Advances in molecular ecology (ed. by G. Carvalho pp. 39 53. NATO-ASI Workshop Series. IOS Press, Amsterdam.
8. Beerli, P. Felsenstein, J. (1999) Maximum likelihood estimation of migration rates and population numbers of two populations using a coalescent approach. Genetics, 152, 763 773.
9. Beerli, P. Felsenstein, J. (2001) Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach. Proceedings of the National Academy of Sciences USA, 98, 4563 4568.
10. Bidlack, A.L. Cook, J.A. (2001) Reduced genetic variation in insular northern flying squirrels (Glaucomys sabrinus) along the North Pacific Coast. Animal Conservation, 4, 283 290.
11. Excoffier, L., Smouse, P.E. Quattro, J.M. (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: applications to human mitochondrial DNA restriction data. Genetics, 131, 479 791.
12. Felsenstein, J. (1981) Evolutionary trees from DNA sequences. A maximum likelihood approach. Journal of Molecular Evolution, 17, 368 376.
13. Felsenstein, J. (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39, 783 791.
14. Fu, Y.X. (1997) Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics, 147, 915 925.
15. Gallardo, M.H. Palma, R.E. (1990) Systematics of Oryzomys longicaudatus (Rodentia: Muridae) in Chile. Journal of Mammalogy, 71, 333 343.
16. Hasegawa, M., Kishino, K. Yano, T. (1985) Dating the human-ape splitting by a molecular clock of mitochondrial DNA. Journal of Molecular Evolution, 22, 160 174.
17. Heads, M. (2006) Panbiogeography of Nothofagus (Nothofagaceae): analysis of the main species massings. Journal of Biogeography, 33, 1066 1075.
18. Heusser, C.J., Heusser, L.E. Lowell, T.V. (1999) Paleoecology of the Southern Chilean Lake District-Isla Grande de Chiloé during middle-late Llanquihue glaciation and deglaciation. Geografiska Annaler, 81A, 231 284.
19. Hewitt, G.M. (2004) Genetic consequences of climatic oscillations in the Quaternary. Philosophical Transactions of the Royal Society B: Biological Sciences, 359, 183 195.
20. Knowles, L.L. Maddison, W.P. (2002) Statistical phylogeography. Molecular Ecology, 11, 2623 2635.
21. Kocher, T.D., Conroy, J.A., McKaye, K.R. Stauffer, J.R. (1993) Similar morphologies of cichlid fish in Lakes Tanganyika and Malawi are due to convergence. Molecular Phylogenetics and Evolution, 2, 158 165.
22. Kuhner, M.K., Yamato, J. Felsenstein, J. (1998) Maximum likelihood estimation of population growth rates based on the coalescent. Genetics, 149, 429 434.
23. Mantel, N. (1967) The detection of disease clustering and a generalized regression approach. Cancer Research, 27, 209 220.
24. Markgraf, V., Romero, E. Villagrán, C. (1996) History and paleoecology of South America Nothofagus forests. The ecology and biogeography of Nothofagus forests (ed. by T.T. Veblen, R.S. Hill J. Read pp. 354 386. Yale University Press, New Haven, CT.
25. Mayr, E. (1942) Systematics and the origin of species. Dover Publications, New York.
26. Miller, M.P. (2005) Alleles in Space: computer software for the joint analysis of interindividual spatial and genetic information. Journal of Heredity, 26, 722 724.
27. Muñoz-Pedreros, A. Palma, E. (2000) Marsupiales. Mamíferos de Chile (ed. by A. Muñoz-Pedreros J. Yañez pp. 43 51. Ediciones CEA, Valdivia, Chile.
28. New World Marsupial Specialist Group (1996) Dromiciops gliroides. IUCN 2006. 2006 IUCN Red List of Threatened Species. IUCN, http://www.iucnredlist.org (last accessed 13 March 2008).
29. Palma, R.E. Spotorno, A.E. (1999) Molecular systematics of marsupials based on the rRNA 12S mitochondrial gene: the phylogeny of Didelphimorphia and of the living fossil microbiotheriid Dromiciops gliroides Thomas. Molecular Phylogenetics and Evolution, 13, 525 535.
30. Palma, R.E., Rivera-Milla, E., Yates, T.L., Marquet, P.A. Meynard, A.P. (2002) Phylogenetic and biogeographic relationships of the mouse opossum Thylamys (Didelphimorphia, Didelphidae) in southern South America. Molecular Phylogenetics and Evolution, 25, 245 253.
31. Palma, R.E., Rivera-Milla, E., Salazar-Bravo, J., Torres-Perez, F., Pardinas, U.F.J., Marquet, P.A., Spotorno, A.E., Meynard, A.P. Yates, T.L. (2005) Phylogeography of Oligoryzomys longicaudatus (Rodentia: Sigmodontinae) in temperate South America. Journal of Mammalogy, 86, 191 200.
32. Phillips, M.J., Mclenachan, P.A., Down, C., Gibb, G.C. Penny, D. (2006) Combined mitochondrial and nuclear DNA sequences resolve the interrelations of the major Australasian marsupial radiations. Systematic Biology, 55, 122 137.
33. Posada, D. Crandall, K.A. (1998) MODELTEST: testing the model of DNA substitution. Bioinformatics, 14, 817 818.
34. Premoli, A.C. (1997) Genetic variation in a geographically restricted and two widespread species of South American Nothofagus. Journal of Biogeography, 24, 883 892.
35. Riddle, B.R. (1998) The historical assembly of continental biotas: Late Quaternary range-shifting, areas of endemism, and biogeographic structure in the North American mammal fauna. Ecography, 21, 437 446.
36. Rogers, A.R. Harpending, H. (1992) Population growth makes waves in the distribution of pairwise genetic differences. Molecular Biology and Evolution, 9, 552 569.
37. Ronquist, F. Huelsenbeck, J.P. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572 1574.
38. Schneider, S., Roessli, D. Excoffier, L. (2000) ARLEQUIN: a software package for population genetics data analysis. Genetics and Biometry Laboratory, University of Geneva, Switzerland.
39. Simpson, G.G. (1980) Splendid isolation: the curious history of South American mammals. Yale University Press, New Haven, CT.
40. Smith, M.F. Patton, J.L. (1993) The diversification of South American murid rodents: evidence from mitochondrial DNA sequence data for the akodontine tribe. Biological Journal of the Linnean Society, 50, 149 177.
41. Smith, M.F., Kelt, D.A. Patton, J.L. (2001) Testing models of diversification in mice in the Abrothix olivaceus/xanthorhinus complex in Chile and Argentina. Molecular Ecology, 10, 397 405.
42. Soltis, D.E., Morris, A.B., McLachlan, J.S., Manos, P.S. Soltis, P.S. (2006) Comparative phylogeography of unglaciated eastern North America. Molecular Ecology, 15, 4261 4293.
43. Swofford, D.L. (2002) PAUP*. Phylogenetic analysis using Parsimony (*and other methods). Sinauer Associates, Sunderland, MA.
44. Tamura, K. (1992) Estimation of the number of nucleotide substitutions when there are strong transition-transversion and G + C content bias. Molecular Biology and Evolution, 10, 512 526.
45. Villagrán, C. (1988) Late Quaternary vegetation of southern Isla Grande de Chiloé. Quaternary Research, 29, 294 306.
46. Villagrán, C. Hinojosa, L.F. (1997) Historia de los bosques de Sudamérica II: fitogeografía. Revista Chilena de Historia Natural, 70, 241 267.
47. Vuilleumier, F. Monasterio, M. (eds 1986) High altitude tropical biogeography. Oxford University Press, New York.
48. Webb, S.D. (1991) Ecogeography of the Great American interchange. Paleobiology, 17, 266 280.
49. Wright, S. (1978) Evolution and the genetics of populations. University of Chicago Press, Chicago.
50. Yahnke, C.J., Johnson, W.E., Geffen, E., Smith, D., Hertel, F., Roy, M.S., Bonacic, C.F., Fuller, T.K., Vanvalkenburgh, B. Wayne, R.K. (1996) Darwin's fox: a distinct endangered species in a vanishing habitat. Conservation Biology, 10, 366 375.