Distribution of various types and P25 subtypes of Beet necrotic yellow vein virus in Germany and other European countries

Archives of Virology

Volumn 153, Issue 11, 2008, Pages 2139-2144

  Koenig, R ^a   Kastirr, U ^a   Holtschulte, B ^b   Deml, G ^a   Varrelmann, M ^c  

^a INSTITUTE FOR EPIDEMIOLOGY AND PATHOGEN DIAGNOSTICS   (Germany)

^b KWS SAAT SE   (Germany)

^c Inst fur Zuckerrubenforschung   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; BEET; CLASSIFICATION; EUROPE; GENETICS; GENOTYPE; GERMANY; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT DISEASE; RNA VIRUS; SEQUENCE ALIGNMENT; VIROLOGY;

AMINO ACID SEQUENCE; BASE SEQUENCE; BETA VULGARIS; EUROPE; GENOTYPE; GERMANY; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANT DISEASES; RNA VIRUSES; SEQUENCE ALIGNMENT; VIRAL PROTEINS;

BEET NECROTIC YELLOW VEIN VIRUS; BETA VULGARIS SUBSP. VULGARIS;

EID: 55949104061     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-008-0234-3     Document Type: Article

References (27)

1. R Acosta-Leal CM Rush 2007 Mutations associated with resistance-breaking isolates of Beet necrotic yellow vein virus and their allelic discrimination using TaqMan technology Phytopathology 97 325 330
2. R Acosta-Leal MW Fawley CM Rush 2008 Changes in the intraisolate genetic structure of Beet necrotic yellow vein virus populations associated with plant resistance breakdown Virology 376 60 68
3. S Bouzoubaa H Guilley G Jonard K Richards C Putz 1985 Nucleotide sequence analysis of RNA-3 and RNA-4 of beet necrotic yellow vein virus, isolates F2 and G1 J Gen Virol 66 1553 1564
4. S Chiba M Miyanishi IB Andika H Kondo T Tamada 2008 Identification of amino acids of the beet necrotic yellow vein virus p25 protein required for induction of the resistance response in leaves of Beta vulgaris plants J Gen Virol 89 1314 1323
5. G Hamdorf D-E Lesemann HL Weidemann 1977 Untersuchungen über die Rizomania-Krankheit an Zuckerrüben in der Bundesrepublik Deutschland Phytopath Z 90 97 103
6. VA Harju RA Mumford A Blockley N Boonham GRG Clover R Weekes CM Henry 2002 Occurrence in the United Kingdom of Beet necrotic yellow vein virus isolates which contain RNA 5 Plant Pathol 51 811
7. E Klein D Link A Schirmer M Erhardt D Gilmer 2007 Sequence variation within Beet necrotic yellow vein virus p25 protein influences its oligomerization and isolate pathogenicity on Tetragonia expansa Virus Res 126 53 61
8. R Koenig AM Haeberle U Commandeur 1997 Detection and characterization of a distinct type of beet necrotic yellow vein virus RNA 5 in a sugarbeet growing area in Europe Arch Virol 142 1499 1504
9. R Koenig P Lüddecke AM Haeberle 1995 Detection of beet necrotic yellow vein virus strains, variants and mixed infections by examining single-strand conformation polymorphisms of immunocapture RT-PCR products J Gen Virol 76 Pt 8 2051 2055
10. R Koenig W Jarausch Y Li U Commandeur W Burgermeister M Gehrke P Lüddecke 1991 Effect of recombinant beet necrotic yellow vein virus with different RNA compositions on mechanically inoculated sugarbeets J Gen Virol 72 2243 2246
11. R Koenig B-L Lennefors 2000 Molecular analyses of European A, B and P type sources of beet necrotic yellow vein virus and detection of the rare P type in Kazakhstan Arch Virol 145 1561 1570
12. Koenig R, Loss S, Specht J, Varrelmann M, Lüddecke P, Deml G (2008) The accumulation of Beet necrotic yellow vein virus in rootlets of mechanically inoculated, partially resistant sugarbeet seedlings is greatly enhanced by a c → t nucleotide substitution in position 200 of its P25-coding sequence. VIIth symposium of the international working group on plant viruses with fungal vectors, Quedlinburg ( http://www.iwgpvfv2008.bafz.de/meeting/program.html ) (Abstracts p 27)
13. M Kruse R Koenig A Hoffmann A Kaufmann U Commandeur AG Solovyev I Savenkov W Burgermeister 1994 Restriction fragment length polymorphism analysis of reverse transcription-PCR products reveals the existence of two major strain groups of beet necrotic yellow vein virus J Gen Virol 75 Pt 8 1835 1842
14. NDK Kutluk Yilmaz A Meunier J-F Schmit A Stas C Bragard 2007 Partial nucleotide sequence analysis of Turkish isolates of Beet necrotic yellow vein virus (BNYVV) RNA-3 Plant Pathol 56 311 316
15. M Li T Liu B Wang CG Han DW Li JL Yu 2008 Phylogenetic analysis of Beet necrotic yellow vein virus isolates from China Virus Genes 36 429 432
16. H-Y Liu RT Lewellen 2007 Distribution and molecular characterization of resistance-breaking isolates of Beet necrotic yellow vein virus in the United States Plant Dis 91 847 851
17. Meunier A, Schmit J-F, Bragard C (2003) Sequences analysis of Belgian BNYVV and development of a simultaneous detection of soil-borne sugar-beet viruses by RT-PCR. In: Rush CM, Merz U (eds) Proceedings of the fifth symposium of the international working group on plant viruses with fungal vectors, 2002, Zurich, pp 9-12
18. M Miyanishi T Kusume M Saito T Tamada 1999 Evidence for three groups of sequence variants of beet necrotic yellow vein virus RNA 5 Arch Virol 144 879 892
19. C Ratti GRG Clover CR Autonell VA Harju CA Henry 2005 A multiplex RT-PCR assay capable of distinguishing beet necrotic yellow vein virus types A and B J Virol Methods 124 41 47
20. M Saito T Kiguchi T Kusume T Tamada 1996 Complete nucleotide sequence of the Japanese isolate S of beet necrotic yellow vein virus RNA and comparison with European isolates Arch Virol 141 2163 2175
21. N Saitou M Nei 1987 The neighbor-joining method: a new method for reconstructing phylogenetic trees Mol Biol Evol 4 406 425
22. A Schirmer D Link V Cognat B Moury M Beuve A Meunier C Bragard D Gilmer O Lemaire 2005 Phylogenetic analysis of isolates of Beet necrotic yellow vein virus collected worldwide J Gen Virol 86 2897 2911
23. Tamada T, Miyanishi M, Kondo H, Chiba H, Han CG (2003) Pathogenicity and molecular variability of Beet necrotic yellow vein virus isolates from Europe, Japan, China and the United States. In: Rush CM, Merz U (eds) Proceedings of the fifth symposium of the international working group on plant viruses with fungal vectors, 2002, Zurich, pp 13-16
24. T Tamada Y Shirako H Abe M Saito T Kiguchi T Harada 1989 Production and pathogenicity of isolates of beet necrotic yellow vein virus with different numbers of RNA components J Gen Virol 70 3399 3409
25. T Tamada H Uchino T Kusume M Saito 1999 RNA 3 deletion mutants of Beet necrotic yellow vein virus do not cause rhizomania disease in sugar beets Phytopathology 89 1000 1006
26. K Tamura J Dudley M Nei S Kumar 2007 MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0 Mol Biol Evol 24 1596 1599
27. L Ward R Koenig G Budge C Garrido C McGrath H Stubbley N Boonham 2007 Occurrence of two different types of RNA-5-containing beet necrotic yellow vein virus in the UK Arch Virol 152 59 73