Occurrence of two different types of RNA-5-containing beet necrotic yellow vein virus in the UK

Archives of Virology

Volumn 152, Issue 1, 2007, Pages 59-73

  Ward, L ^a   Koenig, R ^b   Budge, G ^a   Garrido, C ^c   McGrath, C ^a   Stubbley, H ^a   Boonham, N ^a  

^a CENTRAL SCIENCE LABORATORY   (United Kingdom)

^b INSTITUTE FOR EPIDEMIOLOGY AND PATHOGEN DIAGNOSTICS   (Germany)

^c UNIVERSITY OF CÁDIZ   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

PRIMER DNA; VIRUS RNA;

ARTICLE; BEET; CLASSIFICATION; EUROPE; GENETICS; ISOLATION AND PURIFICATION; KAZAKHSTAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT DISEASE; PLANT VIRUS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA VIRUS; SEQUENCE HOMOLOGY; UNITED KINGDOM; VIROLOGY;

BASE SEQUENCE; BETA VULGARIS; DNA PRIMERS; EUROPE; GREAT BRITAIN; KAZAKHSTAN; PHYLOGENY; PLANT DISEASES; PLANT VIRUSES; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA VIRUSES; RNA, VIRAL; SEQUENCE HOMOLOGY, NUCLEIC ACID;

BEET NECROTIC YELLOW VEIN VIRUS; BETA VULGARIS SUBSP. VULGARIS;

EID: 33845789751     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-006-0832-x     Document Type: Article

References (33)

1. MJC Asher 1993 Rhizomania DA Cooke RK Scott The Sugar Beet Crop, Science into Practice Chapman & Hall London 311 346
2. SJ Blunt MJC Asher CA Gilligan 1991 Infection of sugar beet by Polymyxa betae in relation to soil temperature Plant Pathol 40 257 267
3. S Bouzoubaa H Guilley G Jonard K Richards C Putz 1985 Nucleotide sequence analysis of RNA-3 and RNA-4 of beet necrotic yellow vein virus, isolates F2 and G1 J Gen Virol 66 1553 1564
4. S Bouzoubaa V Ziegler D Beck H Guilley K Richards G Jonard 1986 Nucleotide sequence of beet necrotic yellow vein virus RNA-2 J Gen Virol 67 1689 1700
5. S Bouzoubaa L Quillet H Guilley G Jonard K Richards 1987 Nucleotide sequence of beet necrotic yellow vein virus RNA-1 J Gen Virol 68 615 626
6. A Canova 1959 Appunti di patologia della barbabietola Informatore Fitopatologico 9 390 396
7. J Devereux P Haeberli O Smithies 1984 A comprehensive set of sequence analyses for the VAX Nucleic Acids Res 12 387 395
8. P Dunoyer S Pfeffer C Fritsch O Hemmer O Voinnet KE Richards 2002 Identification, subcellular localization and some properties of a cysteine-rich supressor of gene silencing encoded by peanut clump virus Plant J 29 555 567
9. VA Harju RA Mumford A Blockley N Boonham GRG Clover R Weekes CM Henry 2002 Occurrence in the United Kingdom of beet necrotic yellow vein virus which contain RNA5 Plant Pathol 51 811
10. CM Henry V Harju G Brewer I Barker 1992 Methods for the detection of Rhizomania disease in soil Aspects Appl Biol 32 129 133
11. CM Henry 1996 Rhizomania - its effect on sugar beet yield in the UK Br Sug Beet Rev 64 24 26
12. SA Hill L Torrance 1989 Rhizomania disease of sugar beet in England Plant Pathol 38 114 122
13. R Koenig W Jarausch Y Li U Commandeur W Burgermeister M Gehrke P Lüddecke 1991 Effect of recombinant beet necrotic yellow vein virus with different RNA compositions on mechanically inoculated sugarbeets J Gen Virol 72 2243 2246
14. R Koenig P Lüddecke AM Haeberlé 1995 Detection of beet necrotic yellow vein virus strains, variants and mixed infections by examining single-strand conformation polymorphisms of immunocapture RT-PCR products J Gen Virol 76 2051 2055
15. R Koenig AM Haeberlé U Commandeur 1997 Detection and characterization of a distinct type of beet necrotic yellow vein virus RNA 5 in a sugarbeet growing area in Europe Arch Virol 142 1499 1504
16. R Koenig BL Lennefors 2000 Molecular analyses of European A, B and P type sources of beet necrotic yellow vein virus and detection of the rare P type in Kazakhstan Arch Virol 145 1561 1570
17. Koenig R, Lesemann D-E (2005) Benyvirus. In: Fauquet CM, Mayo M, Maniloff J, Desselberger U, Ball LA (eds) Virus Taxonomy, VIIIth Report of the ICTV. Elsevier/Academic Press, London, pp 1043-1048
18. Koenig R, Büttner G, Pferdmenges F, Herrenschwand W, Deml G, Varrelmann M (2006) Distribution of various types of beet necrotic yellow vein virus in Europe and abroad. In: Rush CM, Merz U (eds) Proc, Sixth Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Bologna, September 5-7, 2005 (in press)
19. M Kruse R Koenig A Hoffmann A Kaufmann U Commandeur AG Solovyev I Savenkov W Burgermeister 1994 RFLP analysis of RT-PCR products reveals the existence of two major strain groups of beet necrotic yellow vein virus J Gen Virol 75 1835 1842
20. D Li J Yu C Han T Liu S Qin Y Liu R Koenig 1999 Detection and nucleotide sequence analysis of beet necrotic yellow vein virus RNA 5 isolated in China Chin J Biotechnol 15 42 46
21. Meunier A, Schmit J-F, Bragard C (2003) Sequences analysis of Belgian BNYVV and development of a simultaneous detection of soilborne sugar-beet viruses by RT-PCR. In: Rush CM, Merz U (eds) Proceedings of the Fifth Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Zurich, July 22-25, 2002, pp 9-12
22. A Meunier JF Schmit C Bragard 2005 Comparison of the beet necrotic yellow vein virus P75 nucleotide sequences of Belgian type A and type B sources Virus Res 108 15 22
23. M Miyanishi T Kusume M Saito T Tamada 1999 Evidence for three groups of sequence variants of beet necrotic yellow vein virus RNA 5 Arch Virol 144 879 892
24. J Morris GRG Clover VA Harju SA Hugo CM Henry 2001 Development of a highly sensitive nested RT-PCR method for beet necrotic yellow vein virus J Virol Methods 95 163 169
25. Ratti C, Resca R, Lanzoni C, Rubies Autonell C (2006) Amino acid changes in the 25 protein of beet necrotic yellow vein virus. In: Rush CM, Merz U (eds) Proc, Sixth Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Bologna, September 5-7, 2005 (in press)
26. M Saito T Kiguchi T Kusume T Tamada 1996 Complete nucleotide sequence of the Japanese isolate S of beet necrotic yellow vein virus RNA and comparison with European isolates Arch Virol 141 2163 2175
27. N Saitou M Nei 1987 The neighbour-joining method: a new method for reconstructing phylogenetic trees Mol Biol Evol 4 406 425
28. A Schirmer D Link V Cognat B Moury M Beuve A Meunier C Bragard D Gilmer O Lemaire 2005 Phylogenotic analysis of isolates of beet necrotic yellow vein virus collected worldwide J Gen Virol 86 2897 2911
29. T Tamada T Baba 1973 Beet necrotic yellow vein virus from Rhizomania affected sugar beet in Japan Ann Phytopath Soc Japan 39 325 332
30. T Tamada H Abe 1989 Evidence that beet necrotic yellow vein virus RNA-4 is essential for efficient transmission by the fungus Polymyxa betae J Gen Virol 70 3391 3398
31. Tamada T, Kusume T, Uchino H, Kiguchi T, Saito M (1996) Evidence that beet necrotic yellow vein virus RNA-5 is involved in symptom development of sugarbeet roots. In: Sherwood JL, Rush CM (eds) Proceedings of the Third Symposium of the International Working Group on Plant Viruses with Fungal Vectors. West Park Conference Center, Dundee, Scotland, August 6-7, 1996, pp 49-52
32. T Tamada H Uchino T Kusume M Saito 1999 RNA 3 deletion mutants of beet necrotic yellow vein virus do not cause rhizomania disease in sugar beets Phytopathology 89 1000 1006
33. Tamada T, Miyanishi M, Kondo H, Chiba H, Han CG (2003) Pathogenicity and molecular variability of beet necrotic yellow vein virus isolates from Europe, Japan, China and the United States. In: Rush CM, Merz U (eds) Proc, Fifth Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Zurich, July 22-25, 2002, pp 13-16